Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7614
Gene name
LocationContig_450:16864..17242
Strand+
Gene length (bp)378
Transcript length (bp)378
Coding sequence length (bp)378
Protein length (aa) 126

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1307 0.0674 0.9241 0.0631 0.0594 0.0052 0.2608 0.1171 0.1884 0.0017

SignalP

SignalP signal predicted Location Score
Yes 1 - 26 0.999703

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7679
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7614 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7614
MRYYLLAFILAFLFGSGLALPVQGSAAAQQGAELSADHTSFQDGPLNNNLLSQAKFAQEAEALALAAYGDDEKKG
SFFERLGRFIPVAVGIFLNVARRAMKDTLPHIGGFLLGAHRNDNYGLVKD*
Coding >Hirsu2|7614
ATGAGGTACTATCTCCTCGCCTTCATCCTTGCCTTCCTGTTCGGCAGCGGGCTCGCCCTCCCCGTCCAGGGCTCG
GCCGCCGCCCAGCAAGGCGCCGAGCTGTCGGCCGACCATACGAGCTTTCAAGACGGCCCGCTGAACAACAACCTG
CTCTCGCAGGCCAAGTTCGCGCAGGAAGCAGAGGCGCTGGCCCTCGCCGCCTATGGAGACGACGAGAAGAAGGGC
AGCTTCTTCGAGAGACTCGGCAGGTTCATCCCCGTGGCCGTCGGCATCTTCCTCAACGTCGCCAGGCGCGCGATG
AAAGACACGCTGCCCCATATTGGCGGCTTCCTGCTCGGCGCCCATCGCAACGACAATTACGGCCTGGTCAAGGAT
TGA
Transcript >Hirsu2|7614
ATGAGGTACTATCTCCTCGCCTTCATCCTTGCCTTCCTGTTCGGCAGCGGGCTCGCCCTCCCCGTCCAGGGCTCG
GCCGCCGCCCAGCAAGGCGCCGAGCTGTCGGCCGACCATACGAGCTTTCAAGACGGCCCGCTGAACAACAACCTG
CTCTCGCAGGCCAAGTTCGCGCAGGAAGCAGAGGCGCTGGCCCTCGCCGCCTATGGAGACGACGAGAAGAAGGGC
AGCTTCTTCGAGAGACTCGGCAGGTTCATCCCCGTGGCCGTCGGCATCTTCCTCAACGTCGCCAGGCGCGCGATG
AAAGACACGCTGCCCCATATTGGCGGCTTCCTGCTCGGCGCCCATCGCAACGACAATTACGGCCTGGTCAAGGAT
TGA
Gene >Hirsu2|7614
ATGAGGTACTATCTCCTCGCCTTCATCCTTGCCTTCCTGTTCGGCAGCGGGCTCGCCCTCCCCGTCCAGGGCTCG
GCCGCCGCCCAGCAAGGCGCCGAGCTGTCGGCCGACCATACGAGCTTTCAAGACGGCCCGCTGAACAACAACCTG
CTCTCGCAGGCCAAGTTCGCGCAGGAAGCAGAGGCGCTGGCCCTCGCCGCCTATGGAGACGACGAGAAGAAGGGC
AGCTTCTTCGAGAGACTCGGCAGGTTCATCCCCGTGGCCGTCGGCATCTTCCTCAACGTCGCCAGGCGCGCGATG
AAAGACACGCTGCCCCATATTGGCGGCTTCCTGCTCGGCGCCCATCGCAACGACAATTACGGCCTGGTCAAGGAT
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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