Protein ID | Hirsu2|7551 |
Gene name | |
Location | Contig_445:12602..13408 |
Strand | + |
Gene length (bp) | 806 |
Transcript length (bp) | 723 |
Coding sequence length (bp) | 723 |
Protein length (aa) | 241 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13668 | Ferritin_2 | Ferritin-like domain | 6.1E-14 | 87 | 213 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53693|RDS1_SCHPO | Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 | 22 | 216 | 4.0E-48 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.15 | 0.0531 | 0.8806 | 0.14 | 0.1665 | 0.1185 | 0.3422 | 0.2012 | 0.1959 | 0.0551 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999758 |
Orthofinder run ID | 4 |
Orthogroup | 5597 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7551 MLHSIFGFGLRLPLVLTLLSRARAVPFHDGNALGLGYERADSVSASSGRLVRLPGRRRGPRPAAGALHGGIGTDG AAPVYRVQSDFDYQSLALALYQEWIELDLFHWGLAAYSVDEFEFDGLNAEHRFLLQHMAEQEVGCATVLTNMLGP QAPRQCSYSCPVSNEREFLDINLQLTRWGEAGVYGFLLHLDSPPATQLLLQSITIEARQQMILCQLNVAGWYGRS GIKLRDARGQRFGVT* |
Coding | >Hirsu2|7551 ATGCTCCACTCCATATTCGGTTTCGGGCTTCGGCTCCCGCTCGTGCTCACGCTGCTGAGCCGTGCTCGTGCCGTT CCGTTTCACGACGGGAACGCTCTCGGTCTCGGTTACGAGCGCGCCGACTCCGTCTCGGCCTCCTCCGGCCGGCTC GTTCGACTACCCGGCCGACGGCGAGGTCCACGGCCAGCAGCCGGCGCCCTTCACGGCGGCATCGGGACCGACGGC GCGGCGCCGGTCTACCGCGTGCAGAGCGACTTCGACTACCAGTCCCTCGCCCTGGCCCTCTATCAGGAGTGGATC GAGCTGGACCTCTTCCACTGGGGGCTGGCCGCGTACAGCGTCGACGAGTTCGAGTTCGACGGGCTCAACGCCGAG CACCGCTTCCTGCTGCAGCACATGGCAGAACAGGAGGTCGGCTGCGCGACCGTCCTGACCAACATGCTCGGGCCG CAGGCGCCGAGGCAGTGCTCCTATAGCTGCCCCGTGTCCAACGAGCGCGAGTTCCTCGACATCAACCTGCAGCTG ACGCGATGGGGCGAAGCGGGCGTCTACGGCTTCTTGCTCCATCTCGACTCGCCCCCGGCCACACAGCTGCTCCTG CAGAGCATCACCATCGAGGCCCGCCAGCAGATGATCTTGTGCCAACTTAATGTGGCCGGCTGGTACGGGAGGTCT GGAATAAAACTCCGGGACGCAAGAGGGCAGCGCTTCGGCGTCACCTGA |
Transcript | >Hirsu2|7551 ATGCTCCACTCCATATTCGGTTTCGGGCTTCGGCTCCCGCTCGTGCTCACGCTGCTGAGCCGTGCTCGTGCCGTT CCGTTTCACGACGGGAACGCTCTCGGTCTCGGTTACGAGCGCGCCGACTCCGTCTCGGCCTCCTCCGGCCGGCTC GTTCGACTACCCGGCCGACGGCGAGGTCCACGGCCAGCAGCCGGCGCCCTTCACGGCGGCATCGGGACCGACGGC GCGGCGCCGGTCTACCGCGTGCAGAGCGACTTCGACTACCAGTCCCTCGCCCTGGCCCTCTATCAGGAGTGGATC GAGCTGGACCTCTTCCACTGGGGGCTGGCCGCGTACAGCGTCGACGAGTTCGAGTTCGACGGGCTCAACGCCGAG CACCGCTTCCTGCTGCAGCACATGGCAGAACAGGAGGTCGGCTGCGCGACCGTCCTGACCAACATGCTCGGGCCG CAGGCGCCGAGGCAGTGCTCCTATAGCTGCCCCGTGTCCAACGAGCGCGAGTTCCTCGACATCAACCTGCAGCTG ACGCGATGGGGCGAAGCGGGCGTCTACGGCTTCTTGCTCCATCTCGACTCGCCCCCGGCCACACAGCTGCTCCTG CAGAGCATCACCATCGAGGCCCGCCAGCAGATGATCTTGTGCCAACTTAATGTGGCCGGCTGGTACGGGAGGTCT GGAATAAAACTCCGGGACGCAAGAGGGCAGCGCTTCGGCGTCACCTGA |
Gene | >Hirsu2|7551 ATGCTCCACTCCATATTCGGTTTCGGGCTTCGGCTCCCGCTCGTGCTCACGCTGCTGAGCCGTGCTCGTGCCGTT CCGTTTGTGCCTTCATCTCCGGCTCCGCCAGCCTTCGTGCCTCCGGCAAGCGTCATGTGCCACGGCCCCTACGCC GGGCCCCTTAACAGCACGACGGGAACGCTCTCGGTCTCGGTTACGAGCGCGCCGACTCCGTCTCGGCCTCCTCCG GCCGGCTCGTTCGACTACCCGGCCGACGGCGAGGTCCACGGCCAGCAGCCGGCGCCCTTCACGGCGGCATCGGGA CCGACGGCGCGGCGCCGGTCTACCGCGTGCAGAGCGACTTCGACTACCAGTCCCTCGCCCTGGCCCTCTATCAGG AGTGGATCGAGCTGGACCTCTTCCACTGGGGGCTGGCCGCGTACAGCGTCGACGAGTTCGAGTTCGACGGGCTCA ACGCCGAGCACCGCTTCCTGCTGCAGCACATGGCAGAACAGGAGGTCGGCTGCGCGACCGTCCTGACCAACATGC TCGGGCCGCAGGCGCCGAGGCAGTGCTCCTATAGCTGCCCCGTGTCCAACGAGCGCGAGTTCCTCGACATCAACC TGCAGCTGACGCGATGGGGCGAAGCGGGCGTCTACGGCTTCTTGCTCCATCTCGACTCGCCCCCGGCCACACAGC TGCTCCTGCAGAGCATCACCATCGAGGCCCGCCAGCAGATGATCTTGTGCCAACTTAATGTGGCCGGCTGGTACG GGAGGTCTGGAATAAAACTCCGGGACGCAAGAGGGCAGCGCTTCGGCGTCACCTGA |