Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7526
Gene name
Location	Contig_442:7537..9313
Strand	-
Gene length (bp)	1776
Transcript length (bp)	1569
Coding sequence length (bp)	1569
Protein length (aa)	523

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02582	DUF155	RMND1/Sif2-Sif3/Mrx10, DUF155	5.8E-53	297	468

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74446\|SIF2_SCHPO	Sad1-interacting factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif2 PE=1 SV=2	95	516	4.0E-128
sp\|Q03441\|RMD1_YEAST	Sporulation protein RMD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD1 PE=1 SV=1	48	521	5.0E-117
sp\|P43620\|RMD8_YEAST	Sporulation protein RMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD8 PE=1 SV=1	296	515	1.0E-44
sp\|Q09877\|SIF3_SCHPO	Sad1-interacting factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif3 PE=1 SV=2	92	482	5.0E-41
sp\|Q9NWS8\|RMND1_HUMAN	Required for meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=RMND1 PE=1 SV=2	297	507	2.0E-23

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74446\|SIF2_SCHPO	Sad1-interacting factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif2 PE=1 SV=2	95	516	4.0E-128
sp\|Q03441\|RMD1_YEAST	Sporulation protein RMD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD1 PE=1 SV=1	48	521	5.0E-117
sp\|P43620\|RMD8_YEAST	Sporulation protein RMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD8 PE=1 SV=1	296	515	1.0E-44
sp\|Q09877\|SIF3_SCHPO	Sad1-interacting factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif3 PE=1 SV=2	92	482	5.0E-41
sp\|Q9NWS8\|RMND1_HUMAN	Required for meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=RMND1 PE=1 SV=2	297	507	2.0E-23
sp\|Q8CI78\|RMND1_MOUSE	Required for meiotic nuclear division protein 1 homolog OS=Mus musculus GN=Rmnd1 PE=1 SV=1	297	507	5.0E-23
sp\|Q5RAR5\|RMND1_PONAB	Required for meiotic nuclear division protein 1 homolog OS=Pongo abelii GN=RMND1 PE=2 SV=1	297	507	2.0E-22
sp\|Q05648\|MRX10_YEAST	MIOREX complex component 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRX10 PE=1 SV=1	303	506	2.0E-19

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	496	515	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7526 MEARGSQDENAPLLANQPASPDSRPKNARTVTFSADPVTRTIEPEPMLIHSGQNAPVAAGNAVQPPALAALNNKL RRRYSHGAAPAAVPAPAGAKIGPQRSTKKTEKLKLLPNPDFEDGEDEESGRDVYSQYTRIKDPTARRDAARLGKS DRSRLPRVTAYSTANKYDMEGLMRFLKGRGKTRGANPKLIDECIYTPYAYGKPGDPRLRPVRRRSRRHSTGGETF DAESRRQLARDDLRDSSTHDSGYGDDFPADDVHPDADVGGDGLLEPEGLDDMPVAESETAPDFDTQVHTPEVFLF DYGVVVVWGMQEAQEARFLRDIAKFEIEKLSPDDVETEHFNFYYTREYQARIYNDFITLRDKHNYMTKLAISHAL AQSVKTSLFEELIASTIDTCKDIPTQIALTGKINLSRSQINMQIGELFILRINIHLNGSVLDTPELFWVEPQLEP VYQAVRSYLEMDQRVELLTERLDVIADLLAVLKDQLSHGHDEKLEWIVIVLIAMEILVAAVNIVVDIYAGEA*
Coding	>Hirsu2\|7526 ATGGAGGCTCGGGGAAGCCAGGACGAGAACGCGCCTCTCCTGGCGAACCAGCCCGCGTCGCCCGACAGCCGGCCC AAGAACGCGCGCACCGTCACCTTCAGCGCCGACCCCGTCACCAGGACCATCGAGCCCGAGCCGATGCTCATTCAT TCCGGCCAAAACGCCCCAGTCGCCGCCGGCAATGCCGTCCAGCCCCCCGCGCTCGCCGCCCTGAACAACAAGCTC CGCCGGCGATACAGCCACGGCGCCGCCCCGGCCGCCGTCCCTGCTCCCGCCGGTGCCAAGATTGGGCCTCAGAGG AGCACGAAGAAGACGGAGAAGCTCAAGCTTCTGCCCAACCCCGACTTCGAGGACGGCGAGGACGAGGAGAGCGGC CGAGACGTCTACTCGCAGTACACCCGCATCAAGGACCCGACCGCCAGGAGAGATGCGGCCCGGCTGGGGAAGAGC GACCGCAGCCGGCTCCCTCGCGTGACGGCCTACTCGACCGCCAACAAGTATGACATGGAGGGCCTCATGCGCTTC CTCAAGGGCCGCGGCAAGACCCGCGGCGCCAACCCCAAGCTCATCGACGAGTGCATATACACCCCCTACGCCTAC GGCAAGCCCGGCGACCCGCGTCTCCGTCCGGTGCGCCGACGCAGCCGTCGTCACTCGACCGGCGGCGAGACCTTT GACGCCGAGTCGCGCCGCCAGCTGGCCCGCGACGACCTGCGCGACTCGTCGACGCACGACTCGGGATACGGAGAC GACTTCCCGGCCGACGACGTCCACCCGGATGCCGACGTCGGCGGCGACGGGCTGCTCGAACCCGAAGGCTTGGAC GACATGCCCGTCGCCGAGTCGGAGACCGCGCCCGACTTTGACACCCAGGTGCACACGCCCGAGGTCTTCCTCTTC GACTACGGCGTCGTCGTCGTCTGGGGCATGCAGGAGGCTCAGGAGGCTCGCTTCCTCCGCGACATTGCCAAGTTC GAGATCGAAAAGCTCTCGCCCGACGACGTCGAGACGGAACACTTCAACTTCTACTACACCCGCGAGTACCAGGCG CGCATCTACAACGACTTCATCACGCTGCGCGACAAGCACAACTACATGACCAAGCTGGCCATCTCGCATGCTCTC GCGCAGAGCGTCAAGACGTCCCTGTTCGAGGAACTCATCGCCTCCACCATTGATACGTGCAAAGACATCCCGACA CAGATTGCCCTGACGGGCAAGATCAACCTGAGCCGGTCCCAGATCAACATGCAGATCGGCGAGCTCTTCATCCTC CGCATCAACATCCACCTCAACGGCTCCGTCCTCGACACGCCCGAGCTCTTCTGGGTCGAACCCCAGCTGGAGCCC GTCTACCAGGCCGTGCGGAGCTACCTGGAGATGGACCAGCGCGTCGAGCTCCTGACGGAGCGCCTGGATGTCATC GCCGACTTACTGGCCGTTCTCAAGGACCAGCTGAGCCACGGCCACGACGAGAAGCTCGAGTGGATCGTGATCGTG CTGATTGCCATGGAAATCCTCGTCGCGGCCGTGAACATCGTGGTGGACATCTACGCCGGCGAAGCATGA
Transcript	>Hirsu2\|7526 ATGGAGGCTCGGGGAAGCCAGGACGAGAACGCGCCTCTCCTGGCGAACCAGCCCGCGTCGCCCGACAGCCGGCCC AAGAACGCGCGCACCGTCACCTTCAGCGCCGACCCCGTCACCAGGACCATCGAGCCCGAGCCGATGCTCATTCAT TCCGGCCAAAACGCCCCAGTCGCCGCCGGCAATGCCGTCCAGCCCCCCGCGCTCGCCGCCCTGAACAACAAGCTC CGCCGGCGATACAGCCACGGCGCCGCCCCGGCCGCCGTCCCTGCTCCCGCCGGTGCCAAGATTGGGCCTCAGAGG AGCACGAAGAAGACGGAGAAGCTCAAGCTTCTGCCCAACCCCGACTTCGAGGACGGCGAGGACGAGGAGAGCGGC CGAGACGTCTACTCGCAGTACACCCGCATCAAGGACCCGACCGCCAGGAGAGATGCGGCCCGGCTGGGGAAGAGC GACCGCAGCCGGCTCCCTCGCGTGACGGCCTACTCGACCGCCAACAAGTATGACATGGAGGGCCTCATGCGCTTC CTCAAGGGCCGCGGCAAGACCCGCGGCGCCAACCCCAAGCTCATCGACGAGTGCATATACACCCCCTACGCCTAC GGCAAGCCCGGCGACCCGCGTCTCCGTCCGGTGCGCCGACGCAGCCGTCGTCACTCGACCGGCGGCGAGACCTTT GACGCCGAGTCGCGCCGCCAGCTGGCCCGCGACGACCTGCGCGACTCGTCGACGCACGACTCGGGATACGGAGAC GACTTCCCGGCCGACGACGTCCACCCGGATGCCGACGTCGGCGGCGACGGGCTGCTCGAACCCGAAGGCTTGGAC GACATGCCCGTCGCCGAGTCGGAGACCGCGCCCGACTTTGACACCCAGGTGCACACGCCCGAGGTCTTCCTCTTC GACTACGGCGTCGTCGTCGTCTGGGGCATGCAGGAGGCTCAGGAGGCTCGCTTCCTCCGCGACATTGCCAAGTTC GAGATCGAAAAGCTCTCGCCCGACGACGTCGAGACGGAACACTTCAACTTCTACTACACCCGCGAGTACCAGGCG CGCATCTACAACGACTTCATCACGCTGCGCGACAAGCACAACTACATGACCAAGCTGGCCATCTCGCATGCTCTC GCGCAGAGCGTCAAGACGTCCCTGTTCGAGGAACTCATCGCCTCCACCATTGATACGTGCAAAGACATCCCGACA CAGATTGCCCTGACGGGCAAGATCAACCTGAGCCGGTCCCAGATCAACATGCAGATCGGCGAGCTCTTCATCCTC CGCATCAACATCCACCTCAACGGCTCCGTCCTCGACACGCCCGAGCTCTTCTGGGTCGAACCCCAGCTGGAGCCC GTCTACCAGGCCGTGCGGAGCTACCTGGAGATGGACCAGCGCGTCGAGCTCCTGACGGAGCGCCTGGATGTCATC GCCGACTTACTGGCCGTTCTCAAGGACCAGCTGAGCCACGGCCACGACGAGAAGCTCGAGTGGATCGTGATCGTG CTGATTGCCATGGAAATCCTCGTCGCGGCCGTGAACATCGTGGTGGACATCTACGCCGGCGAAGCATGA
Gene	>Hirsu2\|7526 ATGGAGGCTCGGGGAAGCCAGGACGAGAACGCGCCTCTCCTGGCGAACCAGCCCGCGTCGCCCGACAGCCGGCCC AAGAACGCGCGCACCGTCACCTTCAGCGCCGACCCCGTCACCAGGACCATCGAGCCCGAGCCGATGCTCATTCAT TCCGGCCAAAACGCCCCAGTCGCCGCCGGCAATGCCGTCCAGCCCCCCGCGCTCGCCGCCCTGAACAACAAGCTC CGCCGGCGATACAGCCACGGCGCCGCCCCGGCCGCCGTCCCTGCTCCCGCCGGTGCCAAGATTGGGCCTCAGAGG AGCACGAAGAAGACGGAGAAGCTCAAGCTTCTGCCCAACCCCGACTTCGAGGACGGCGAGGACGAGGAGAGCGGC CGAGACGTCTACTCGCAGTACACCCGCATCAAGGACCCGACCGCCAGGAGAGATGCGGCCCGGCTGGGGAAGAGC GACCGCAGCCGGCTCCCTCGCGTGACGGCCTACTCGACCGCCAACAAGTATGACATGGAGGGCCTCATGCGCTTC CTCAAGGGCCGCGGCAAGACCCGCGGCGCCAACCCCAAGCTCATCGACGAGTGCATATACACCCCCTACGCCTAC GGCAAGCCCGGCGACCCGCGTCTCCGTCCGGTGCGCCGACGCAGCCGTCGTCACTCGACCGGCGGCGAGACCTTT GACGCCGAGTCGCGCCGCCAGCTGGCCCGCGACGACCTGCGCGACTCGTCGACGCACGACTCGGGATACGGAGAC GACTTCCCGGCCGACGACGTCCACCCGGATGCCGACGTCGGCGGCGACGGGCTGCTCGAACCCGAAGGCTTGGAC GACATGCCCGTCGCCGAGTCGGAGACCGCGCCCGACTTTGACACCCAGGTGCACACGCCCGAGGTCTTCCTCTTC GACTACGGCGTCGTCGTCGTCTGGGGCATGCAGGAGGCTCAGGAGGCTCGCTTCCTCCGCGACATTGCCAAGTTC GAGATCGAAAAGCTCTCGCCCGACGACGTCGAGACGGAACACTTCAACTTCTACTACACCCGCGAGTACCAGGCG CGCATCTACAACGACTTCATCACGCTGCGCGACAAGCACAACTACATGACCAAGCTGGCCATCTCGCATGCTCTC GCGCAGAGCGTCAAGGTACGTTTGGCTTGCTCTCCCCCCCTCCCCGCCGGCATTTGCCCACCCGGCTGGTCTCTA TCTCTCGCCCGAGGCACATGGTGACCGAAGCCCGGCGGACAGACGTCCCTGTTCGAGGAACTCATCGCCTCCACC ATTGATACGTGCAAAGACATCCCGACACAGATTGCCCTGACGGGCAAGATCAACCTGAGCCGGTCCCAGATCAAC ATGCAGATCGGCGAGCTCTTCATCCTCCGCATCAACATCCACCTCAACGGCTCCGTCCTCGACACGCCCGAGCTC TTCTGGGTCGAACCCCAGCTGGAGCCCGTCTACCAGGCCGTGCGGAGCTACCTGGAGATGGACCAGCGCGTCGAG CTCCTGACGGAGCGCCTGGATGTCATCGCCGACTTACTGGCCGTTCTCAAGGACCAGCTGAGCCACGGCCACGAC GAGAAGCTCGAGTGGATCGGTGAGCCCCCCCCATCTTTTTCCTCTTCCCGCACCCTGGCGTTTCCGACCGGGTGG CGAGCCGGCGCTGACGGTGTGGCCTTGTCCATTACCACGTATCCTGCAGTGATCGTGCTGATTGCCATGGAAATC CTCGTCGCGGCCGTGAACATCGTGGTGGACATCTACGCCGGCGAAGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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