Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7518
Gene name
LocationContig_441:8505..9447
Strand+
Gene length (bp)942
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 197 219 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7518
MLPSSLSSALLSALLLAGPLQAARQCYWIDGTPSDDSQQPCNPNDEHSACCAINKNNPDICLSSGLCYAQDSGFE
GMIYSNGCTDKTGMAAACPHICPDRTNSWKGGPVINSYNVLQCNAGSKFCCRKATDSENCCGNESAAISVNVGQL
RLSTKTTTTTVGAGATATVTPASCEAASSNKSQTGQCPKDNSAVVGGAVGGVLGVALLASLGALAVVCLRKPKEY
HTYHGPTEYSNNITVSGPPPQELPTRPVHEMQGSQVGSSYDYSPTTKKPR*
Coding >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG
ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC
TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA
CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG
GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG
GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC
CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA
AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA
TGA
Transcript >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG
ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC
TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA
CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG
GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG
GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC
CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA
AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA
TGA
Gene >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGT
GAGTATCCGCTCGTACTTGGAGGCCCGGATGCAGCCCGCGCTGACGAACAGTCTGTAGGGACAAATAGCTGGAAG
GGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGCTGCCGCAAGGCAACT
GATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTACGCCTGTCGACCAAG
ACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAGGCGGCGTCATCCAAC
AAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGGGGAGTGCTCGGCGTT
GCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATACCGTGCGTTGTCATTC
GAGGTTTGCCACATGCGCCCAGGAACTGATGATCCCTCAGATACCTACCATGGCCCTACGGAATACTCCAACAAC
ATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACAAGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGG
AGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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