© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7518 |
| Gene name | |
| Location | Contig_441:8505..9447 |
| Strand | + |
| Gene length (bp) | 942 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Signal peptide | 0.0789 | 0.1019 | 0.6073 | 0.6895 | 0.1154 | 0.007 | 0.061 | 0.3692 | 0.1731 | 0.0694 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.999716 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 197 | 219 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 7114 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-rufipedis | Ophun1|3191 |
| Ophiocordyceps kimflemingae | Ophio5|5865 |
| Ophiocordyceps subramaniannii | Hirsu2|7518 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7518 MLPSSLSSALLSALLLAGPLQAARQCYWIDGTPSDDSQQPCNPNDEHSACCAINKNNPDICLSSGLCYAQDSGFE GMIYSNGCTDKTGMAAACPHICPDRTNSWKGGPVINSYNVLQCNAGSKFCCRKATDSENCCGNESAAISVNVGQL RLSTKTTTTTVGAGATATVTPASCEAASSNKSQTGQCPKDNSAVVGGAVGGVLGVALLASLGALAVVCLRKPKEY HTYHGPTEYSNNITVSGPPPQELPTRPVHEMQGSQVGSSYDYSPTTKKPR* |
| Coding | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA TGA |
| Transcript | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA TGA |
| Gene | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGT GAGTATCCGCTCGTACTTGGAGGCCCGGATGCAGCCCGCGCTGACGAACAGTCTGTAGGGACAAATAGCTGGAAG GGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGCTGCCGCAAGGCAACT GATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTACGCCTGTCGACCAAG ACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAGGCGGCGTCATCCAAC AAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGGGGAGTGCTCGGCGTT GCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATACCGTGCGTTGTCATTC GAGGTTTGCCACATGCGCCCAGGAACTGATGATCCCTCAGATACCTACCATGGCCCTACGGAATACTCCAACAAC ATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACAAGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGG AGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGATGA |