Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7518
Gene name
LocationContig_441:8505..9447
Strand+
Gene length (bp)942
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide 0.0789 0.1019 0.6073 0.6895 0.1154 0.007 0.061 0.3692 0.1731 0.0694

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999716

Transmembrane Domains

Domain # Start End Length
1 197 219 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7114
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-rufipedis Ophun1|3191
Ophiocordyceps kimflemingae Ophio5|5865
Ophiocordyceps subramaniannii Hirsu2|7518 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7518
MLPSSLSSALLSALLLAGPLQAARQCYWIDGTPSDDSQQPCNPNDEHSACCAINKNNPDICLSSGLCYAQDSGFE
GMIYSNGCTDKTGMAAACPHICPDRTNSWKGGPVINSYNVLQCNAGSKFCCRKATDSENCCGNESAAISVNVGQL
RLSTKTTTTTVGAGATATVTPASCEAASSNKSQTGQCPKDNSAVVGGAVGGVLGVALLASLGALAVVCLRKPKEY
HTYHGPTEYSNNITVSGPPPQELPTRPVHEMQGSQVGSSYDYSPTTKKPR*
Coding >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG
ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC
TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA
CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG
GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG
GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC
CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA
AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA
TGA
Transcript >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG
ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC
TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA
CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG
GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG
GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC
CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA
AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA
TGA
Gene >Hirsu2|7518
ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG
TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC
TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG
GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGT
GAGTATCCGCTCGTACTTGGAGGCCCGGATGCAGCCCGCGCTGACGAACAGTCTGTAGGGACAAATAGCTGGAAG
GGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGCTGCCGCAAGGCAACT
GATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTACGCCTGTCGACCAAG
ACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAGGCGGCGTCATCCAAC
AAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGGGGAGTGCTCGGCGTT
GCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATACCGTGCGTTGTCATTC
GAGGTTTGCCACATGCGCCCAGGAACTGATGATCCCTCAGATACCTACCATGGCCCTACGGAATACTCCAACAAC
ATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACAAGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGG
AGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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