Protein ID | Hirsu2|7518 |
Gene name | |
Location | Contig_441:8505..9447 |
Strand | + |
Gene length (bp) | 942 |
Transcript length (bp) | 828 |
Coding sequence length (bp) | 828 |
Protein length (aa) | 276 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide | 0.0789 | 0.1019 | 0.6073 | 0.6895 | 0.1154 | 0.007 | 0.061 | 0.3692 | 0.1731 | 0.0694 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.999716 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 197 | 219 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7114 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps camponoti-rufipedis | Ophun1|3191 |
Ophiocordyceps kimflemingae | Ophio5|5865 |
Ophiocordyceps subramaniannii | Hirsu2|7518 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7518 MLPSSLSSALLSALLLAGPLQAARQCYWIDGTPSDDSQQPCNPNDEHSACCAINKNNPDICLSSGLCYAQDSGFE GMIYSNGCTDKTGMAAACPHICPDRTNSWKGGPVINSYNVLQCNAGSKFCCRKATDSENCCGNESAAISVNVGQL RLSTKTTTTTVGAGATATVTPASCEAASSNKSQTGQCPKDNSAVVGGAVGGVLGVALLASLGALAVVCLRKPKEY HTYHGPTEYSNNITVSGPPPQELPTRPVHEMQGSQVGSSYDYSPTTKKPR* |
Coding | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA TGA |
Transcript | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGG ACAAATAGCTGGAAGGGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGC TGCCGCAAGGCAACTGATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTA CGCCTGTCGACCAAGACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAG GCGGCGTCATCCAACAAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGG GGAGTGCTCGGCGTTGCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATAC CATACCTACCATGGCCCTACGGAATACTCCAACAACATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACA AGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGGAGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGA TGA |
Gene | >Hirsu2|7518 ATGCTCCCTTCAAGCTTGTCGTCAGCACTGTTGAGTGCTCTCCTGCTTGCTGGCCCTCTGCAGGCCGCGAGACAG TGCTATTGGATCGACGGCACCCCCTCCGACGACAGCCAACAACCGTGCAATCCGAACGACGAGCACAGCGCCTGC TGTGCCATCAACAAGAACAATCCCGACATCTGCCTGTCCTCGGGACTGTGCTATGCACAAGATTCGGGGTTCGAG GGCATGATCTACTCAAACGGATGCACAGACAAGACGGGCATGGCCGCCGCATGTCCGCACATCTGCCCTGACCGT GAGTATCCGCTCGTACTTGGAGGCCCGGATGCAGCCCGCGCTGACGAACAGTCTGTAGGGACAAATAGCTGGAAG GGCGGCCCTGTCATCAACTCGTACAACGTCTTGCAATGCAACGCGGGAAGCAAGTTTTGCTGCCGCAAGGCAACT GATTCCGAGAACTGCTGCGGGAACGAAAGCGCGGCCATCAGCGTCAACGTCGGCCAACTACGCCTGTCGACCAAG ACGACGACGACGACGGTCGGAGCCGGTGCTACGGCGACGGTGACGCCGGCATCGTGCGAGGCGGCGTCATCCAAC AAATCCCAGACCGGGCAGTGCCCCAAAGACAATTCGGCCGTCGTCGGCGGAGCCGTGGGGGGAGTGCTCGGCGTT GCACTGCTGGCGTCTCTCGGCGCCCTCGCCGTCGTGTGCCTGCGGAAGCCAAAGGAATACCGTGCGTTGTCATTC GAGGTTTGCCACATGCGCCCAGGAACTGATGATCCCTCAGATACCTACCATGGCCCTACGGAATACTCCAACAAC ATAACAGTTTCGGGGCCTCCGCCCCAGGAGCTTCCCACAAGACCGGTCCACGAAATGCAAGGAAGTCAGGTCGGG AGTAGCTACGACTACTCGCCCACAACCAAAAAGCCGCGATGA |