Protein ID | Hirsu2|7480 |
Gene name | |
Location | Contig_437:17953..19461 |
Strand | + |
Gene length (bp) | 1508 |
Transcript length (bp) | 1287 |
Coding sequence length (bp) | 1287 |
Protein length (aa) | 429 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1407 | 0.0793 | 0.9495 | 0.1064 | 0.1423 | 0.0286 | 0.2825 | 0.1491 | 0.2353 | 0.0061 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.999759 |
Orthofinder run ID | 4 |
Orthogroup | 303 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7480 MARPLAALLGLVAAAQALPASGNLNSSTPANLNSSTPDNLNSSAPGNSSSQYRFDHGGRVSAPQRDPGAGGEHRP SGPEPAASPSPSPVEGQGQFDFMLGRPAAPAPLTTLLPEVHWDHDTRPAANVRPVPAGEESRLFYGNSDPFKAGH FAFINYYFTSPSVNIDHCDHVTVSRVEADSLTVVFHSREAFDHAAGSWSVEQGLVLIAHVQGCGDYERGERCYFS VLSLETHSSSGRGGVIVARGQSKHPDSLTSGWETEWGWWSPHGERAGASSARESAAAEPTFSWRPSADPTPGAGP SRTSGTGAAAATPARSGGGAPKNGSSARLTGRVPCVAPPDTKYGLPTACLGDLFDLDLDDGLGRDFMGDKARGFV DALAPEFDFEVPPRPSGLDFDKADPLWRKKQRRGLVVRRWTWASVWASHQQGV* |
Coding | >Hirsu2|7480 ATGGCCAGGCCGTTGGCCGCCCTGCTCGGCCTCGTCGCCGCGGCCCAGGCCCTCCCCGCCTCTGGCAACTTGAAC TCTTCGACGCCCGCAAACTTGAACTCTTCGACACCCGACAACTTGAACTCGTCGGCACCCGGGAACTCGTCGTCC CAGTACCGCTTCGACCACGGAGGCCGCGTGAGCGCTCCTCAGCGCGATCCCGGCGCCGGCGGCGAGCATCGGCCC TCGGGCCCGGAGCCCGCGGCGTCCCCGAGCCCGTCGCCCGTCGAGGGCCAGGGGCAGTTCGACTTCATGCTCGGA CGGCCGGCCGCCCCGGCGCCCCTGACGACGCTGCTGCCGGAGGTTCACTGGGACCATGACACGCGGCCGGCGGCC AATGTCCGGCCCGTGCCGGCCGGCGAGGAGTCTCGGTTGTTCTATGGCAACTCCGACCCCTTCAAGGCCGGCCAC TTTGCCTTCATAAACTATTACTTCACCAGCCCGTCGGTCAACATCGACCACTGCGATCACGTCACCGTCAGCCGC GTCGAGGCCGACAGCCTGACCGTCGTCTTCCACAGCCGAGAGGCCTTCGACCACGCGGCAGGCAGCTGGTCGGTA GAGCAGGGGCTGGTCCTCATCGCCCACGTCCAGGGCTGCGGCGACTACGAGCGCGGAGAGCGCTGCTACTTCTCC GTCTTGAGCCTGGAGACGCACTCCTCGTCGGGCCGCGGCGGCGTCATCGTCGCCCGCGGTCAGTCCAAGCACCCG GACAGCCTCACCTCGGGCTGGGAGACGGAATGGGGATGGTGGAGCCCCCACGGCGAGCGGGCGGGCGCGTCCTCG GCCCGGGAGAGCGCCGCCGCCGAGCCGACTTTTTCCTGGCGCCCGTCCGCCGACCCGACCCCCGGGGCCGGCCCG TCCCGGACGAGCGGCACCGGGGCCGCCGCCGCGACGCCGGCCCGGTCCGGCGGTGGGGCCCCGAAGAACGGCTCG TCGGCGCGCCTGACGGGCCGCGTGCCCTGCGTCGCGCCCCCGGACACCAAGTACGGCCTGCCGACGGCCTGCCTG GGCGACCTGTTCGACCTCGACCTCGACGACGGGCTCGGCCGCGACTTCATGGGCGACAAGGCCCGGGGCTTCGTC GACGCCCTGGCGCCCGAGTTCGACTTCGAGGTGCCGCCCCGGCCGTCCGGCCTCGACTTCGACAAGGCCGACCCG CTGTGGAGGAAGAAGCAGCGGCGCGGGCTCGTCGTCCGGCGCTGGACCTGGGCCTCGGTCTGGGCCTCGCATCAA CAAGGAGTTTAG |
Transcript | >Hirsu2|7480 ATGGCCAGGCCGTTGGCCGCCCTGCTCGGCCTCGTCGCCGCGGCCCAGGCCCTCCCCGCCTCTGGCAACTTGAAC TCTTCGACGCCCGCAAACTTGAACTCTTCGACACCCGACAACTTGAACTCGTCGGCACCCGGGAACTCGTCGTCC CAGTACCGCTTCGACCACGGAGGCCGCGTGAGCGCTCCTCAGCGCGATCCCGGCGCCGGCGGCGAGCATCGGCCC TCGGGCCCGGAGCCCGCGGCGTCCCCGAGCCCGTCGCCCGTCGAGGGCCAGGGGCAGTTCGACTTCATGCTCGGA CGGCCGGCCGCCCCGGCGCCCCTGACGACGCTGCTGCCGGAGGTTCACTGGGACCATGACACGCGGCCGGCGGCC AATGTCCGGCCCGTGCCGGCCGGCGAGGAGTCTCGGTTGTTCTATGGCAACTCCGACCCCTTCAAGGCCGGCCAC TTTGCCTTCATAAACTATTACTTCACCAGCCCGTCGGTCAACATCGACCACTGCGATCACGTCACCGTCAGCCGC GTCGAGGCCGACAGCCTGACCGTCGTCTTCCACAGCCGAGAGGCCTTCGACCACGCGGCAGGCAGCTGGTCGGTA GAGCAGGGGCTGGTCCTCATCGCCCACGTCCAGGGCTGCGGCGACTACGAGCGCGGAGAGCGCTGCTACTTCTCC GTCTTGAGCCTGGAGACGCACTCCTCGTCGGGCCGCGGCGGCGTCATCGTCGCCCGCGGTCAGTCCAAGCACCCG GACAGCCTCACCTCGGGCTGGGAGACGGAATGGGGATGGTGGAGCCCCCACGGCGAGCGGGCGGGCGCGTCCTCG GCCCGGGAGAGCGCCGCCGCCGAGCCGACTTTTTCCTGGCGCCCGTCCGCCGACCCGACCCCCGGGGCCGGCCCG TCCCGGACGAGCGGCACCGGGGCCGCCGCCGCGACGCCGGCCCGGTCCGGCGGTGGGGCCCCGAAGAACGGCTCG TCGGCGCGCCTGACGGGCCGCGTGCCCTGCGTCGCGCCCCCGGACACCAAGTACGGCCTGCCGACGGCCTGCCTG GGCGACCTGTTCGACCTCGACCTCGACGACGGGCTCGGCCGCGACTTCATGGGCGACAAGGCCCGGGGCTTCGTC GACGCCCTGGCGCCCGAGTTCGACTTCGAGGTGCCGCCCCGGCCGTCCGGCCTCGACTTCGACAAGGCCGACCCG CTGTGGAGGAAGAAGCAGCGGCGCGGGCTCGTCGTCCGGCGCTGGACCTGGGCCTCGGTCTGGGCCTCGCATCAA CAAGGAGTTTAG |
Gene | >Hirsu2|7480 ATGGCCAGGCCGTTGGCCGCCCTGCTCGGCCTCGTCGCCGCGGCCCAGGCCCTCCCCGCCTCTGGCAACTTGAAC TCTTCGACGCCCGCAAACTTGAACTCTTCGACACCCGACAACTTGAACTCGTCGGCACCCGGGAACTCGTCGTCC CAGTACCGCTTCGACCACGGAGGCCGCGTGAGCGCTCCTCAGCGCGATCCCGGCGCCGGCGGCGAGCATCGGCCC TCGGGCCCGGAGCCCGCGGCGTCCCCGAGCCCGTCGCCCGTCGAGGGCCAGGGGCAGTTCGACTTCATGCTCGGA CGGCCGGCCGCCCCGGCGCCCCTGACGACGCTGCTGCCGGAGGTTCACTGGGACCATGACACGCGGCCGGCGGCC AATGTCCGGCCCGTGCCGGCCGGCGAGGAGTCTCGGTTGTTCTATGGCAACTCCGGTACGTCTGCCGTCTCTCAT TCTCTCTCTCACTCTCTCACCCTCACCCTCACTCACACTCTCACTCCCCCTTCTCTCTCCTTTCTCTCTCACAAG CACGCACTCTCTCTGTCATCCAAACACCAACTCGTCCTGTCAACTGACACGACCCGTCGGCCAGACCCCTTCAAG GCCGGCCACTTTGCCTTCATAAACTATTACTTCACCAGCCCGTCGGTCAACATCGACCACTGCGATCACGTCACC GTCAGCCGCGTCGAGGCCGACAGCCTGACCGTCGTCTTCCACAGCCGAGAGGCCTTCGACCACGCGGCAGGCAGC TGGTCGGTAGAGCAGGGGCTGGTCCTCATCGCCCACGTCCAGGGCTGCGGCGACTACGAGCGCGGAGAGCGCTGC TACTTCTCCGTCTTGAGCCTGGAGACGCACTCCTCGTCGGGCCGCGGCGGCGTCATCGTCGCCCGCGGTCAGTCC AAGCACCCGGACAGCCTCACCTCGGGCTGGGAGACGGAATGGGGATGGTGGAGCCCCCACGGCGAGCGGGCGGGC GCGTCCTCGGCCCGGGAGAGCGCCGCCGCCGAGCCGACTTTTTCCTGGCGCCCGTCCGCCGACCCGACCCCCGGG GCCGGCCCGTCCCGGACGAGCGGCACCGGGGCCGCCGCCGCGACGCCGGCCCGGTCCGGCGGTGGGGCCCCGAAG AACGGCTCGTCGGCGCGCCTGACGGGCCGCGTGCCCTGCGTCGCGCCCCCGGACACCAAGTACGGCCTGCCGACG GCCTGCCTGGGCGACCTGTTCGACCTCGACCTCGACGACGGGCTCGGCCGCGACTTCATGGGCGACAAGGCCCGG GGCTTCGTCGACGCCCTGGCGCCCGAGTTCGACTTCGAGGTGCCGCCCCGGCCGTCCGGCCTCGACTTCGACAAG GCCGACCCGCTGTGGAGGAAGAAGCAGCGGCGCGGGCTCGTCGTCCGGCGCTGGACCTGGGCCTCGGTCTGGGCC TCGGTCCGCGACTTCTTCGCCGAGGGCTACCGGGCCGTGGCCGAGGCCATCAGCTTCTCCGGCAGCATCAACAAG GAGTTTAG |