© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7470 |
| Gene name | |
| Location | Contig_436:5909..6337 |
| Strand | + |
| Gene length (bp) | 428 |
| Transcript length (bp) | 336 |
| Coding sequence length (bp) | 336 |
| Protein length (aa) | 112 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 8 | 105 | 5.0E-10 |
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 2 | 106 | 2.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 35 | 57 | 22 |
| 3 | 70 | 92 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7470 MHWIFPCIGSAMTSFGFGAISDIVLTVVIDSYPDIIAQAFVVIAFFRNVLSMAGVFGLTPWRKHMGAKTMFIIVA CVSFAVTFMALPLAIWGKKARIATADRYRRFAKPTS* |
| Coding | >Hirsu2|7470 ATGCACTGGATCTTCCCTTGCATCGGAAGTGCCATGACATCCTTTGGGTTCGGTGCCATTAGCGACATCGTTCTC ACCGTCGTCATTGACTCGTATCCCGATATCATCGCCCAAGCCTTCGTCGTCATTGCCTTTTTCCGCAACGTCCTC AGCATGGCCGGCGTCTTCGGCCTGACGCCTTGGCGCAAGCACATGGGCGCCAAAACCATGTTCATCATCGTGGCG TGCGTGAGTTTTGCCGTCACCTTCATGGCGTTGCCCCTTGCCATCTGGGGCAAGAAGGCCAGGATTGCCACGGCG GATCGATATCGTCGATTCGCCAAGCCGACCAGTTGA |
| Transcript | >Hirsu2|7470 ATGCACTGGATCTTCCCTTGCATCGGAAGTGCCATGACATCCTTTGGGTTCGGTGCCATTAGCGACATCGTTCTC ACCGTCGTCATTGACTCGTATCCCGATATCATCGCCCAAGCCTTCGTCGTCATTGCCTTTTTCCGCAACGTCCTC AGCATGGCCGGCGTCTTCGGCCTGACGCCTTGGCGCAAGCACATGGGCGCCAAAACCATGTTCATCATCGTGGCG TGCGTGAGTTTTGCCGTCACCTTCATGGCGTTGCCCCTTGCCATCTGGGGCAAGAAGGCCAGGATTGCCACGGCG GATCGATATCGTCGATTCGCCAAGCCGACCAGTTGA |
| Gene | >Hirsu2|7470 ATGCACTGGATCTTCCCTTGCATCGGAAGTGCCATGACATCCTTTGGGTTCGGTGCCATTAGCGACATCGTTCTC ACCGTCGTCATTGACTCGTATCCCGATGTGGGCAATCTCGTCTCCTTTTTTTCTTCTTGTTTTTGGCCCGTCTGA GTCTCGCGACCCCAAACCGACGACGCTAACTTCCGAGTTACCAGATCATCGCCCAAGCCTTCGTCGTCATTGCCT TTTTCCGCAACGTCCTCAGCATGGCCGGCGTCTTCGGCCTGACGCCTTGGCGCAAGCACATGGGCGCCAAAACCA TGTTCATCATCGTGGCGTGCGTGAGTTTTGCCGTCACCTTCATGGCGTTGCCCCTTGCCATCTGGGGCAAGAAGG CCAGGATTGCCACGGCGGATCGATATCGTCGATTCGCCAAGCCGACCAGTTGA |