Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7469
Gene name
LocationContig_436:4827..5647
Strand+
Gene length (bp)820
Transcript length (bp)642
Coding sequence length (bp)642
Protein length (aa) 214

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.2E-15 7 205

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94343|YHMA_SCHPO Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 15 196 1.0E-09

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0009987 cellular process No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.0889 0.1431 0.3349 0.3786 0.4028 0.0065 0.4733 0.3264 0.3498 0.0672

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 72 91 19
2 182 204 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup21
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|781
Ophiocordyceps australis 1348a (Ghana) OphauG2|3621
Ophiocordyceps australis map64 (Brazil) OphauB2|135
Ophiocordyceps australis map64 (Brazil) OphauB2|4856
Ophiocordyceps camponoti-floridani Ophcf2|05528
Ophiocordyceps camponoti-floridani Ophcf2|03539
Ophiocordyceps camponoti-floridani Ophcf2|02729
Ophiocordyceps camponoti-floridani Ophcf2|00664
Ophiocordyceps camponoti-rufipedis Ophun1|3781
Ophiocordyceps camponoti-rufipedis Ophun1|1856
Ophiocordyceps camponoti-rufipedis Ophun1|435
Ophiocordyceps camponoti-rufipedis Ophun1|607
Ophiocordyceps kimflemingae Ophio5|4168
Ophiocordyceps kimflemingae Ophio5|4169
Ophiocordyceps kimflemingae Ophio5|5392
Ophiocordyceps kimflemingae Ophio5|6880
Ophiocordyceps kimflemingae Ophio5|741
Ophiocordyceps subramaniannii Hirsu2|7470
Ophiocordyceps subramaniannii Hirsu2|7469 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7335
Ophiocordyceps subramaniannii Hirsu2|6881
Ophiocordyceps subramaniannii Hirsu2|6880
Ophiocordyceps subramaniannii Hirsu2|5938
Ophiocordyceps subramaniannii Hirsu2|1965
Ophiocordyceps subramaniannii Hirsu2|9409
Ophiocordyceps subramaniannii Hirsu2|10936

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7469
MKTLPELFIIDILKGFAGAVNETAVQMSIRDMFFVNQRGTANGIYLAALTSGTTLSPMAAGAQATRFGWRSSYLS
LASVMTVITLLFALAFEETKFVPPVHREGVHIAAHAAAGEKTSGSRHHFRGHGDVDDAAAGLDRVERAPTGMPPQ
RARFRYPRSMRLQLVTPTNESLWKTFYDPIHIWWFPHVLICSLLFGFGLALLLITASMKSGPS*
Coding >Hirsu2|7469
ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT
CAGATGAGTATTCGCGACATGTTCTTCGTCAACCAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACC
AGCGGCACGACCCTCAGCCCCATGGCCGCCGGGGCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGT
CTGGCCTCCGTCATGACCGTCATCACTCTCCTCTTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTC
CATCGAGAGGGCGTCCATATCGCCGCCCACGCCGCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGG
GGCCATGGTGATGTCGACGACGCGGCGGCGGGCTTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAG
CGGGCCAGATTCCGGTACCCGCGCAGTATGAGGTTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACC
TTTTACGACCCAATCCACATCTGGTGGTTCCCCCACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCT
CTGCTGCTCATCACAGCGTCGATGAAATCGGGCCCTTCATAG
Transcript >Hirsu2|7469
ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT
CAGATGAGTATTCGCGACATGTTCTTCGTCAACCAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACC
AGCGGCACGACCCTCAGCCCCATGGCCGCCGGGGCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGT
CTGGCCTCCGTCATGACCGTCATCACTCTCCTCTTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTC
CATCGAGAGGGCGTCCATATCGCCGCCCACGCCGCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGG
GGCCATGGTGATGTCGACGACGCGGCGGCGGGCTTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAG
CGGGCCAGATTCCGGTACCCGCGCAGTATGAGGTTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACC
TTTTACGACCCAATCCACATCTGGTGGTTCCCCCACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCT
CTGCTGCTCATCACAGCGTCGATGAAATCGGGCCCTTCATAG
Gene >Hirsu2|7469
ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT
CAGATGAGTGTCCGTCCTATCCCTCCCCTTGCTTCTCCCATCCTTCCTCGCACTTTCACCACTTCTCGCCCCTCC
CCGCCAACCCTCACACTGACGGTGCCCCTCTGACTGCCGCGCTTTCAACAGATTCGCGACATGTTCTTCGTCAAC
CAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACCAGCGGCACGACCCTCAGCCCCATGGCCGCCGGG
GCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGTCTGGCCTCCGTCATGACCGTCATCACTCTCCTC
TTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTCCATCGAGAGGGCGTCCATATCGCCGCCCACGCC
GCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGGGGCCATGGTGATGTCGACGACGCGGCGGCGGGC
TTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAGCGGGCCAGATTCCGGTACCCGCGCAGTATGAGG
TTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACCTTTTACGACCCAATCCACATCTGGTGGTTCCCC
CACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCTCTGCTGCTCATCACAGCGTCGATGAAGTCCATC
ATCTTCCCCGAGGCGCCCTACAACTTCAACCCCCAACAGCTAGGGCTCCTGCAGATCGGGCCCTTCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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