© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7469 |
| Gene name | |
| Location | Contig_436:4827..5647 |
| Strand | + |
| Gene length (bp) | 820 |
| Transcript length (bp) | 642 |
| Coding sequence length (bp) | 642 |
| Protein length (aa) | 214 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-15 | 7 | 205 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 15 | 196 | 1.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 72 | 91 | 19 |
| 2 | 182 | 204 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7469 MKTLPELFIIDILKGFAGAVNETAVQMSIRDMFFVNQRGTANGIYLAALTSGTTLSPMAAGAQATRFGWRSSYLS LASVMTVITLLFALAFEETKFVPPVHREGVHIAAHAAAGEKTSGSRHHFRGHGDVDDAAAGLDRVERAPTGMPPQ RARFRYPRSMRLQLVTPTNESLWKTFYDPIHIWWFPHVLICSLLFGFGLALLLITASMKSGPS* |
| Coding | >Hirsu2|7469 ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT CAGATGAGTATTCGCGACATGTTCTTCGTCAACCAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACC AGCGGCACGACCCTCAGCCCCATGGCCGCCGGGGCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGT CTGGCCTCCGTCATGACCGTCATCACTCTCCTCTTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTC CATCGAGAGGGCGTCCATATCGCCGCCCACGCCGCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGG GGCCATGGTGATGTCGACGACGCGGCGGCGGGCTTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAG CGGGCCAGATTCCGGTACCCGCGCAGTATGAGGTTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACC TTTTACGACCCAATCCACATCTGGTGGTTCCCCCACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCT CTGCTGCTCATCACAGCGTCGATGAAATCGGGCCCTTCATAG |
| Transcript | >Hirsu2|7469 ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT CAGATGAGTATTCGCGACATGTTCTTCGTCAACCAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACC AGCGGCACGACCCTCAGCCCCATGGCCGCCGGGGCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGT CTGGCCTCCGTCATGACCGTCATCACTCTCCTCTTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTC CATCGAGAGGGCGTCCATATCGCCGCCCACGCCGCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGG GGCCATGGTGATGTCGACGACGCGGCGGCGGGCTTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAG CGGGCCAGATTCCGGTACCCGCGCAGTATGAGGTTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACC TTTTACGACCCAATCCACATCTGGTGGTTCCCCCACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCT CTGCTGCTCATCACAGCGTCGATGAAATCGGGCCCTTCATAG |
| Gene | >Hirsu2|7469 ATGAAGACGCTGCCTGAGCTCTTCATCATCGACATCCTCAAGGGCTTTGCCGGTGCTGTCAACGAGACGGCCGTT CAGATGAGTGTCCGTCCTATCCCTCCCCTTGCTTCTCCCATCCTTCCTCGCACTTTCACCACTTCTCGCCCCTCC CCGCCAACCCTCACACTGACGGTGCCCCTCTGACTGCCGCGCTTTCAACAGATTCGCGACATGTTCTTCGTCAAC CAGAGAGGAACGGCCAACGGCATCTACCTGGCCGCCCTCACCAGCGGCACGACCCTCAGCCCCATGGCCGCCGGG GCGCAGGCGACCAGGTTCGGGTGGCGGTCGTCGTACCTGAGTCTGGCCTCCGTCATGACCGTCATCACTCTCCTC TTCGCCCTCGCCTTCGAAGAGACCAAGTTCGTCCCGCCCGTCCATCGAGAGGGCGTCCATATCGCCGCCCACGCC GCCGCCGGCGAGAAGACCAGCGGCAGCCGCCACCATTTCAGGGGCCATGGTGATGTCGACGACGCGGCGGCGGGC TTGGATCGTGTCGAACGGGCGCCGACGGGGATGCCGCCTCAGCGGGCCAGATTCCGGTACCCGCGCAGTATGAGG TTGCAACTGGTGACACCGACAAACGAGTCCCTGTGGAAGACCTTTTACGACCCAATCCACATCTGGTGGTTCCCC CACGTCCTCATCTGCTCCCTCCTATTCGGCTTCGGCCTCGCTCTGCTGCTCATCACAGCGTCGATGAAGTCCATC ATCTTCCCCGAGGCGCCCTACAACTTCAACCCCCAACAGCTAGGGCTCCTGCAGATCGGGCCCTTCATAG |