Protein ID | Hirsu2|7455 |
Gene name | |
Location | Contig_434:11200..12518 |
Strand | + |
Gene length (bp) | 1318 |
Transcript length (bp) | 1263 |
Coding sequence length (bp) | 1263 |
Protein length (aa) | 421 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.1122 | 0.0553 | 0.7926 | 0.4393 | 0.1144 | 0.0063 | 0.3221 | 0.2917 | 0.2856 | 0.0055 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999294 |
Orthofinder run ID | 4 |
Orthogroup | 98 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7455 MLKTSAVLAGLLSVSYGWTPAVLARALNSRATSSSCASLSGSFNITSDLTKTLHPENAVYHADKGALYMSLLYES RVGILPCGSNKIESVIEFKNLTESFVEGTSGNSTSPKPLDLSDDPTLHASGLELDLPRNRLTVIVEAGDAFDSFG QNIEGPNYVISVDLETKQPVFVVDLTKSAPKDYGGIQDIEHDDDGNIFVVWTWGGRLTRIVPDPKKPVVTEWYRS EKPKPAKALTGIAKFDSTTLLVADQTDAQLYRFSTKDESVREKVQIADGGRLDDTVDGIYLPPKYGGCVILVSDD FNGTWVLSSNDQWKTATKHGVVPSEYGPNGSTTATVEVEGSIFAINEFFGAKDVKSFPLTDITDRVEALLSNTTL SCGKGSNGGSNGTAPTQSGPLVSGSSKTGATLSMFAGMFFAVLLL* |
Coding | >Hirsu2|7455 ATGTTGAAGACGTCAGCAGTGTTGGCGGGCCTCCTGTCGGTCTCGTATGGCTGGACACCGGCCGTGCTCGCGAGG GCCCTCAATAGCAGGGCGACGAGTTCAAGTTGTGCATCGCTCAGTGGTAGCTTCAACATCACGTCGGACCTGACC AAAACGTTGCACCCGGAGAACGCGGTCTATCATGCTGACAAGGGCGCCTTGTACATGAGTCTGCTCTACGAGTCG AGGGTCGGCATCCTCCCCTGCGGCAGCAATAAGATCGAGAGCGTAATCGAGTTCAAAAACCTCACCGAGAGCTTC GTCGAGGGCACCTCTGGGAACAGCACCAGCCCCAAGCCCCTGGACCTCTCTGACGACCCGACCCTTCACGCCAGC GGCCTCGAGCTGGATCTGCCGCGCAACAGGTTGACCGTCATCGTCGAGGCCGGCGACGCCTTCGACTCCTTCGGT CAAAATATCGAGGGACCCAACTACGTCATCAGCGTGGATTTGGAGACGAAACAGCCGGTCTTCGTGGTAGACTTG ACCAAGTCCGCCCCGAAAGACTATGGCGGTATCCAGGACATCGAGCACGACGACGACGGCAACATCTTCGTCGTC TGGACCTGGGGTGGCAGACTCACTCGCATCGTCCCCGACCCGAAGAAGCCTGTTGTGACCGAGTGGTATCGCAGC GAGAAGCCGAAGCCTGCCAAGGCTCTGACCGGCATTGCCAAGTTCGACAGCACGACTCTCCTGGTCGCCGATCAG ACGGACGCACAGCTGTATCGCTTCAGCACCAAGGATGAGAGCGTCCGTGAGAAGGTCCAGATCGCCGATGGCGGC AGGCTGGACGACACCGTCGACGGCATCTACCTGCCGCCCAAGTACGGCGGCTGCGTCATTCTCGTGAGCGACGAC TTCAACGGCACCTGGGTCCTCAGCTCCAACGACCAATGGAAGACCGCCACGAAGCACGGCGTCGTGCCCAGCGAG TACGGCCCGAACGGTTCCACCACCGCCACCGTCGAGGTCGAGGGCAGCATCTTCGCCATCAACGAGTTCTTCGGC GCAAAGGACGTGAAGTCGTTCCCGCTTACCGACATCACGGACAGGGTCGAGGCCCTCTTGAGCAACACGACCCTG TCCTGTGGGAAGGGATCGAACGGGGGATCGAACGGAACTGCTCCCACCCAGTCCGGACCCCTCGTCTCCGGCTCG TCCAAGACTGGTGCCACTCTGAGCATGTTCGCCGGCATGTTCTTCGCGGTCTTGCTCCTGTGA |
Transcript | >Hirsu2|7455 ATGTTGAAGACGTCAGCAGTGTTGGCGGGCCTCCTGTCGGTCTCGTATGGCTGGACACCGGCCGTGCTCGCGAGG GCCCTCAATAGCAGGGCGACGAGTTCAAGTTGTGCATCGCTCAGTGGTAGCTTCAACATCACGTCGGACCTGACC AAAACGTTGCACCCGGAGAACGCGGTCTATCATGCTGACAAGGGCGCCTTGTACATGAGTCTGCTCTACGAGTCG AGGGTCGGCATCCTCCCCTGCGGCAGCAATAAGATCGAGAGCGTAATCGAGTTCAAAAACCTCACCGAGAGCTTC GTCGAGGGCACCTCTGGGAACAGCACCAGCCCCAAGCCCCTGGACCTCTCTGACGACCCGACCCTTCACGCCAGC GGCCTCGAGCTGGATCTGCCGCGCAACAGGTTGACCGTCATCGTCGAGGCCGGCGACGCCTTCGACTCCTTCGGT CAAAATATCGAGGGACCCAACTACGTCATCAGCGTGGATTTGGAGACGAAACAGCCGGTCTTCGTGGTAGACTTG ACCAAGTCCGCCCCGAAAGACTATGGCGGTATCCAGGACATCGAGCACGACGACGACGGCAACATCTTCGTCGTC TGGACCTGGGGTGGCAGACTCACTCGCATCGTCCCCGACCCGAAGAAGCCTGTTGTGACCGAGTGGTATCGCAGC GAGAAGCCGAAGCCTGCCAAGGCTCTGACCGGCATTGCCAAGTTCGACAGCACGACTCTCCTGGTCGCCGATCAG ACGGACGCACAGCTGTATCGCTTCAGCACCAAGGATGAGAGCGTCCGTGAGAAGGTCCAGATCGCCGATGGCGGC AGGCTGGACGACACCGTCGACGGCATCTACCTGCCGCCCAAGTACGGCGGCTGCGTCATTCTCGTGAGCGACGAC TTCAACGGCACCTGGGTCCTCAGCTCCAACGACCAATGGAAGACCGCCACGAAGCACGGCGTCGTGCCCAGCGAG TACGGCCCGAACGGTTCCACCACCGCCACCGTCGAGGTCGAGGGCAGCATCTTCGCCATCAACGAGTTCTTCGGC GCAAAGGACGTGAAGTCGTTCCCGCTTACCGACATCACGGACAGGGTCGAGGCCCTCTTGAGCAACACGACCCTG TCCTGTGGGAAGGGATCGAACGGGGGATCGAACGGAACTGCTCCCACCCAGTCCGGACCCCTCGTCTCCGGCTCG TCCAAGACTGGTGCCACTCTGAGCATGTTCGCCGGCATGTTCTTCGCGGTCTTGCTCCTGTGA |
Gene | >Hirsu2|7455 ATGTTGAAGACGTCAGCAGTGTTGGCGGGCCTCCTGTCGGTCTCGTATGGCTGGACACCGGCCGTGCTCGCGAGG GCCCTCAATAGCAGGGCGACGAGTTCAAGTTGTGCATCGCTCAGTGGTAGCTTCAACATCACGTCGGACCTGACC AAAACGTTGCACCCGGAGAACGCGGTCTATCATGCTGACAAGGGCGCCTTGTACATGAGGTAGGTCGCCCTGGGC ACGCGTGCGGTATAGAATGCCGAGTGCTGATCCTCGCAGTCTGCTCTACGAGTCGAGGGTCGGCATCCTCCCCTG CGGCAGCAATAAGATCGAGAGCGTAATCGAGTTCAAAAACCTCACCGAGAGCTTCGTCGAGGGCACCTCTGGGAA CAGCACCAGCCCCAAGCCCCTGGACCTCTCTGACGACCCGACCCTTCACGCCAGCGGCCTCGAGCTGGATCTGCC GCGCAACAGGTTGACCGTCATCGTCGAGGCCGGCGACGCCTTCGACTCCTTCGGTCAAAATATCGAGGGACCCAA CTACGTCATCAGCGTGGATTTGGAGACGAAACAGCCGGTCTTCGTGGTAGACTTGACCAAGTCCGCCCCGAAAGA CTATGGCGGTATCCAGGACATCGAGCACGACGACGACGGCAACATCTTCGTCGTCTGGACCTGGGGTGGCAGACT CACTCGCATCGTCCCCGACCCGAAGAAGCCTGTTGTGACCGAGTGGTATCGCAGCGAGAAGCCGAAGCCTGCCAA GGCTCTGACCGGCATTGCCAAGTTCGACAGCACGACTCTCCTGGTCGCCGATCAGACGGACGCACAGCTGTATCG CTTCAGCACCAAGGATGAGAGCGTCCGTGAGAAGGTCCAGATCGCCGATGGCGGCAGGCTGGACGACACCGTCGA CGGCATCTACCTGCCGCCCAAGTACGGCGGCTGCGTCATTCTCGTGAGCGACGACTTCAACGGCACCTGGGTCCT CAGCTCCAACGACCAATGGAAGACCGCCACGAAGCACGGCGTCGTGCCCAGCGAGTACGGCCCGAACGGTTCCAC CACCGCCACCGTCGAGGTCGAGGGCAGCATCTTCGCCATCAACGAGTTCTTCGGCGCAAAGGACGTGAAGTCGTT CCCGCTTACCGACATCACGGACAGGGTCGAGGCCCTCTTGAGCAACACGACCCTGTCCTGTGGGAAGGGATCGAA CGGGGGATCGAACGGAACTGCTCCCACCCAGTCCGGACCCCTCGTCTCCGGCTCGTCCAAGACTGGTGCCACTCT GAGCATGTTCGCCGGCATGTTCTTCGCGGTCTTGCTCCTGTGA |