Protein ID | Hirsu2|7445 |
Gene name | |
Location | Contig_433:7411..7624 |
Strand | + |
Gene length (bp) | 213 |
Transcript length (bp) | 213 |
Coding sequence length (bp) | 213 |
Protein length (aa) | 71 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0512 | 0.0412 | 0.9787 | 0.0334 | 0.0929 | 0.0067 | 0.069 | 0.049 | 0.036 | 0.0036 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999611 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 44 | 66 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 10366 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|7445 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7445 MHASLALVSLLAGLVAAAPTPTNGAGVAVAGGGPGFGGGPGFGGGPGFGGGPGFGGGFGPGFGGFGVKKE* |
Coding | >Hirsu2|7445 ATGCACGCCTCACTCGCCCTCGTCTCGCTGCTTGCTGGCCTGGTTGCCGCAGCACCCACCCCGACCAACGGCGCC GGCGTCGCCGTCGCCGGCGGCGGTCCTGGTTTCGGCGGCGGTCCTGGTTTCGGAGGCGGCCCTGGTTTCGGAGGC GGTCCTGGTTTCGGAGGTGGCTTCGGCCCCGGCTTCGGCGGCTTCGGCGTGAAGAAAGAATAA |
Transcript | >Hirsu2|7445 ATGCACGCCTCACTCGCCCTCGTCTCGCTGCTTGCTGGCCTGGTTGCCGCAGCACCCACCCCGACCAACGGCGCC GGCGTCGCCGTCGCCGGCGGCGGTCCTGGTTTCGGCGGCGGTCCTGGTTTCGGAGGCGGCCCTGGTTTCGGAGGC GGTCCTGGTTTCGGAGGTGGCTTCGGCCCCGGCTTCGGCGGCTTCGGCGTGAAGAAAGAATAA |
Gene | >Hirsu2|7445 ATGCACGCCTCACTCGCCCTCGTCTCGCTGCTTGCTGGCCTGGTTGCCGCAGCACCCACCCCGACCAACGGCGCC GGCGTCGCCGTCGCCGGCGGCGGTCCTGGTTTCGGCGGCGGTCCTGGTTTCGGAGGCGGCCCTGGTTTCGGAGGC GGTCCTGGTTTCGGAGGTGGCTTCGGCCCCGGCTTCGGCGGCTTCGGCGTGAAGAAAGAATAA |