Protein ID | Hirsu2|7441 |
Gene name | |
Location | Contig_432:9809..12430 |
Strand | - |
Gene length (bp) | 2621 |
Transcript length (bp) | 2520 |
Coding sequence length (bp) | 2520 |
Protein length (aa) | 840 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20163 | DUF6536 | Family of unknown function (DUF6536) | 1.4E-30 | 24 | 176 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 65 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 50 | 22 |
2 | 78 | 100 | 22 |
3 | 139 | 161 | 22 |
4 | 176 | 198 | 22 |
5 | 452 | 474 | 22 |
6 | 513 | 535 | 22 |
7 | 619 | 641 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7441 MVFKDALVSVKIKFGLENDRPGNWRRKPILFLTWITTVLVAFFLCFALVATRWGISGRPVAQLYMGDCSHAKNVS SGMQAILSVVSISLTVCFDFFLRLVSSPTVSDLRRAHHDGRSLDIGTQSLRNLRHISPKRRLCWGLLLCTSVPIQ LLLHSTTYMIFTRTEFSRFIVSPDFVTGGVFQFPGVVLGTMGTFNASSDMLSLFYQLLPRFSSSSRRWDRLDSDE CNRIYYQDVDGLQNHRDVLMFVRPDNWTQAQGWKGNKIRNAIPPPNAHNYGWHGYNASEYDSLWVFATRCFQQRK GRDTWDPRRVSTTCCASPDCSDDQGIQVSDGSILNSFGQIAAEKMAMISDGPRRNFPVIDHCFSEPYSAPCKLIV SAPILLTNLVCILLGYVSSCLTTYVCWSEESCQVLGDAIQIFMLNSDLVTPSPPPARRWTHRMASRRLMHVIRRR TWLWTYTPIALFLAAATLAFIVRGGPLYLHTEIGVEFGFGERLKNSLIGLRGGMKPGKGEQALVVYPILANMAQL VVSCSYFVFSSLYSTIFQAKFWADFSTRPQRLRVSFPHADQQATYIFKYPFAWGLGLTMLKAAVGWATSQSLYVV TIANINRWRPDVGAENIDIYFGYSFKAILAVICISPVAALTPLFIGKSYLPSDSLIVGTASAAIAAFCPPSAQLG EPCEAIMRQPDRSTAWDRVWVQRRHLQPLRWGVLKLGRATDGSPEALGLGSEEEILCPPQVGNIYVPVAFHTAIV SGRSRLAYINAPPIQDGDQFVLRSGNGRLDSKANVETFKLVAGWRALRSFTCSNAFTLYLVTILCPRLKLAWAMS RPGHDQSEQQRPSP* |
Coding | >Hirsu2|7441 ATGGTTTTCAAAGATGCCCTGGTCAGTGTCAAGATCAAGTTCGGCCTCGAAAACGACAGACCGGGAAACTGGCGC AGAAAACCCATTCTATTCCTCACATGGATCACGACAGTCCTCGTCGCCTTCTTCCTCTGCTTTGCCCTCGTGGCT ACTCGATGGGGCATTTCCGGACGTCCCGTCGCCCAGCTCTACATGGGAGATTGCAGCCACGCCAAGAATGTCAGC AGCGGCATGCAAGCGATCTTGTCCGTCGTCTCCATCAGCCTGACCGTCTGCTTCGACTTCTTCCTGCGGCTCGTG TCCTCGCCTACGGTATCCGATCTTCGCCGGGCCCACCACGACGGCCGGTCTCTCGACATCGGAACCCAATCGCTG CGGAACCTACGCCATATATCACCTAAGAGACGGTTGTGCTGGGGTTTGCTCCTTTGCACATCCGTGCCGATTCAG CTGCTCCTCCACTCCACAACCTACATGATATTCACCCGAACCGAATTTTCTCGCTTCATCGTGAGCCCGGACTTT GTGACTGGTGGTGTCTTTCAGTTTCCTGGAGTCGTCCTAGGCACCATGGGCACTTTCAACGCCTCCTCCGATATG CTTTCTCTCTTCTACCAGCTCCTGCCAAGATTCTCATCTTCATCCCGCCGATGGGATCGGCTGGATAGCGATGAA TGCAACCGCATATATTACCAGGACGTCGACGGCTTGCAAAACCATCGCGATGTTTTGATGTTCGTGAGGCCCGAC AACTGGACGCAAGCCCAAGGTTGGAAGGGCAATAAGATACGGAACGCTATCCCCCCCCCGAACGCTCACAATTAC GGCTGGCATGGGTACAACGCTTCTGAATACGACTCTCTATGGGTGTTTGCCACTCGATGCTTTCAGCAACGCAAG GGCCGCGATACATGGGACCCGAGACGTGTATCAACGACATGCTGTGCCTCACCGGATTGCTCGGATGATCAAGGA ATACAGGTGAGCGACGGATCGATTCTGAATTCGTTTGGGCAGATCGCAGCAGAAAAAATGGCGATGATCTCCGAT GGGCCACGCCGGAATTTCCCGGTTATTGACCACTGTTTTTCCGAGCCCTATTCCGCCCCATGCAAGCTCATCGTG TCAGCCCCCATCCTCCTCACCAACCTGGTCTGCATCCTTCTTGGATATGTATCGTCCTGTCTGACTACATATGTT TGTTGGAGCGAGGAATCATGCCAAGTTCTTGGCGATGCAATCCAGATCTTCATGCTCAACAGCGACCTCGTCACG CCATCACCACCCCCAGCTAGGAGGTGGACTCATAGGATGGCTTCGAGGCGCTTGATGCACGTCATCAGGCGGAGA ACGTGGCTCTGGACGTATACGCCCATCGCCCTTTTCTTAGCAGCGGCCACCCTCGCTTTCATAGTGCGCGGTGGT CCGCTGTATCTACACACTGAAATAGGCGTCGAGTTTGGGTTCGGGGAAAGGCTCAAAAACAGCCTCATCGGATTA CGAGGCGGTATGAAACCAGGCAAGGGCGAACAGGCCTTGGTTGTCTACCCTATCCTGGCAAACATGGCGCAGCTT GTCGTATCATGCTCTTACTTCGTTTTCAGCTCGCTATACTCTACGATATTTCAAGCAAAGTTTTGGGCAGACTTC TCGACCCGTCCCCAGCGTTTGCGGGTCAGCTTCCCTCACGCCGACCAGCAGGCCACCTACATATTCAAATATCCG TTCGCCTGGGGTCTAGGGCTCACTATGCTCAAGGCAGCGGTCGGGTGGGCGACAAGCCAATCTCTCTATGTAGTT ACGATTGCAAATATAAACAGGTGGCGGCCGGATGTTGGCGCCGAGAATATCGACATCTACTTTGGGTACTCCTTC AAGGCAATCCTTGCCGTCATTTGCATCAGCCCCGTCGCTGCTTTAACGCCTCTCTTCATTGGCAAGAGCTATCTG CCGTCAGACTCGCTGATTGTGGGCACCGCCTCTGCAGCCATCGCGGCTTTTTGTCCGCCCAGTGCACAACTCGGC GAACCTTGTGAGGCAATCATGAGGCAACCAGACCGAAGTACGGCCTGGGATCGTGTCTGGGTGCAGCGCAGACAC CTGCAGCCTCTCAGGTGGGGCGTGTTAAAGCTCGGTCGTGCAACAGACGGGAGCCCAGAGGCCCTGGGTCTTGGA TCCGAAGAGGAAATACTATGTCCGCCCCAAGTCGGGAACATATACGTTCCAGTCGCTTTCCATACGGCAATTGTG TCGGGCAGGAGCAGGCTTGCATATATCAACGCACCCCCTATCCAGGATGGGGACCAATTCGTCTTGAGGAGCGGA AATGGTCGACTTGATTCAAAAGCGAACGTCGAAACATTCAAGTTAGTGGCTGGGTGGCGAGCGCTGCGGTCGTTT ACGTGCAGCAACGCCTTCACCCTTTACCTTGTTACTATTCTATGCCCACGGCTCAAGCTGGCTTGGGCAATGTCG AGGCCGGGCCATGACCAGAGTGAACAGCAGAGGCCCTCACCCTGA |
Transcript | >Hirsu2|7441 ATGGTTTTCAAAGATGCCCTGGTCAGTGTCAAGATCAAGTTCGGCCTCGAAAACGACAGACCGGGAAACTGGCGC AGAAAACCCATTCTATTCCTCACATGGATCACGACAGTCCTCGTCGCCTTCTTCCTCTGCTTTGCCCTCGTGGCT ACTCGATGGGGCATTTCCGGACGTCCCGTCGCCCAGCTCTACATGGGAGATTGCAGCCACGCCAAGAATGTCAGC AGCGGCATGCAAGCGATCTTGTCCGTCGTCTCCATCAGCCTGACCGTCTGCTTCGACTTCTTCCTGCGGCTCGTG TCCTCGCCTACGGTATCCGATCTTCGCCGGGCCCACCACGACGGCCGGTCTCTCGACATCGGAACCCAATCGCTG CGGAACCTACGCCATATATCACCTAAGAGACGGTTGTGCTGGGGTTTGCTCCTTTGCACATCCGTGCCGATTCAG CTGCTCCTCCACTCCACAACCTACATGATATTCACCCGAACCGAATTTTCTCGCTTCATCGTGAGCCCGGACTTT GTGACTGGTGGTGTCTTTCAGTTTCCTGGAGTCGTCCTAGGCACCATGGGCACTTTCAACGCCTCCTCCGATATG CTTTCTCTCTTCTACCAGCTCCTGCCAAGATTCTCATCTTCATCCCGCCGATGGGATCGGCTGGATAGCGATGAA TGCAACCGCATATATTACCAGGACGTCGACGGCTTGCAAAACCATCGCGATGTTTTGATGTTCGTGAGGCCCGAC AACTGGACGCAAGCCCAAGGTTGGAAGGGCAATAAGATACGGAACGCTATCCCCCCCCCGAACGCTCACAATTAC GGCTGGCATGGGTACAACGCTTCTGAATACGACTCTCTATGGGTGTTTGCCACTCGATGCTTTCAGCAACGCAAG GGCCGCGATACATGGGACCCGAGACGTGTATCAACGACATGCTGTGCCTCACCGGATTGCTCGGATGATCAAGGA ATACAGGTGAGCGACGGATCGATTCTGAATTCGTTTGGGCAGATCGCAGCAGAAAAAATGGCGATGATCTCCGAT GGGCCACGCCGGAATTTCCCGGTTATTGACCACTGTTTTTCCGAGCCCTATTCCGCCCCATGCAAGCTCATCGTG TCAGCCCCCATCCTCCTCACCAACCTGGTCTGCATCCTTCTTGGATATGTATCGTCCTGTCTGACTACATATGTT TGTTGGAGCGAGGAATCATGCCAAGTTCTTGGCGATGCAATCCAGATCTTCATGCTCAACAGCGACCTCGTCACG CCATCACCACCCCCAGCTAGGAGGTGGACTCATAGGATGGCTTCGAGGCGCTTGATGCACGTCATCAGGCGGAGA ACGTGGCTCTGGACGTATACGCCCATCGCCCTTTTCTTAGCAGCGGCCACCCTCGCTTTCATAGTGCGCGGTGGT CCGCTGTATCTACACACTGAAATAGGCGTCGAGTTTGGGTTCGGGGAAAGGCTCAAAAACAGCCTCATCGGATTA CGAGGCGGTATGAAACCAGGCAAGGGCGAACAGGCCTTGGTTGTCTACCCTATCCTGGCAAACATGGCGCAGCTT GTCGTATCATGCTCTTACTTCGTTTTCAGCTCGCTATACTCTACGATATTTCAAGCAAAGTTTTGGGCAGACTTC TCGACCCGTCCCCAGCGTTTGCGGGTCAGCTTCCCTCACGCCGACCAGCAGGCCACCTACATATTCAAATATCCG TTCGCCTGGGGTCTAGGGCTCACTATGCTCAAGGCAGCGGTCGGGTGGGCGACAAGCCAATCTCTCTATGTAGTT ACGATTGCAAATATAAACAGGTGGCGGCCGGATGTTGGCGCCGAGAATATCGACATCTACTTTGGGTACTCCTTC AAGGCAATCCTTGCCGTCATTTGCATCAGCCCCGTCGCTGCTTTAACGCCTCTCTTCATTGGCAAGAGCTATCTG CCGTCAGACTCGCTGATTGTGGGCACCGCCTCTGCAGCCATCGCGGCTTTTTGTCCGCCCAGTGCACAACTCGGC GAACCTTGTGAGGCAATCATGAGGCAACCAGACCGAAGTACGGCCTGGGATCGTGTCTGGGTGCAGCGCAGACAC CTGCAGCCTCTCAGGTGGGGCGTGTTAAAGCTCGGTCGTGCAACAGACGGGAGCCCAGAGGCCCTGGGTCTTGGA TCCGAAGAGGAAATACTATGTCCGCCCCAAGTCGGGAACATATACGTTCCAGTCGCTTTCCATACGGCAATTGTG TCGGGCAGGAGCAGGCTTGCATATATCAACGCACCCCCTATCCAGGATGGGGACCAATTCGTCTTGAGGAGCGGA AATGGTCGACTTGATTCAAAAGCGAACGTCGAAACATTCAAGTTAGTGGCTGGGTGGCGAGCGCTGCGGTCGTTT ACGTGCAGCAACGCCTTCACCCTTTACCTTGTTACTATTCTATGCCCACGGCTCAAGCTGGCTTGGGCAATGTCG AGGCCGGGCCATGACCAGAGTGAACAGCAGAGGCCCTCACCCTGA |
Gene | >Hirsu2|7441 ATGGTTTTCAAAGATGCCCTGGTCAGTGTCAAGATCAAGTTCGGCCTCGAAAACGACAGACCGGGAAACTGGCGC AGAAAACCCATTCTATTCCTCACATGGATCACGACAGTCCTCGTCGCCTTCTTCCTCTGCTTTGCCCTCGTGGCT ACTCGATGGGGCATTTCCGGACGTCCCGTCGCCCAGCTCTACATGGGAGATTGCAGCCACGCCAAGAATGTCAGC AGCGGCATGCAAGCGATCTTGTCCGTCGTCTCCATCAGCCTGACCGTCTGCTTCGACTTCTTCCTGCGGCTCGTG TCCTCGCCTACGGTATCCGATCTTCGCCGGGCCCACCACGACGGCCGGTCTCTCGACATCGGAACCCAATCGCTG CGGAACCTACGCCATATATCACCTAAGAGACGGTTGTGCTGGGGTTTGCTCCTTTGCACATCCGTGCCGATTCAG CTGCTCCTCCACTCCACAACCTACATGATATTCACCCGAACCGAATTTTCTCGCTTCATCGTGAGCCCGGACTTT GTGACTGGTGGTGTCTTTCAGTTTCCTGGAGTCGTCCTAGGCACCATGGGCACTTTCAACGCCTCCTCCGATATG CTTTCTCTCTTCTACCAGCTCCTGCCAAGATTCTCATCTTCATCCCGCCGATGGGATCGGCTGGATAGCGATGAA TGCAACCGCATATATTACCAGGACGTCGACGGCTTGCAAAACCATCGCGATGTTTTGATGTTCGTGAGGCCCGAC AACTGGACGCAAGCCCAAGGTTGGAAGGGCAATAAGATACGGAACGCTATCCCCCCCCCGAACGCTCACAATTAC GGCTGGCATGGGTACAACGCTTCTGAATACGACTCTCTATGGGTGTTTGCCACTCGATGCTTTCAGCAACGCAAG GGCCGCGATACATGGGACCCGAGACGTGTATCAACGACATGCTGTGCCTCACCGGATTGCTCGGATGATCAAGGA ATACAGGTGAGCGACGGATCGATTCTGAATTCGTTTGGGCAGATCGCAGCAGAAAAAATGGCGATGATCTCCGAT GGGCCACGCCGGAATTTCCCGGTTATTGACCACTGTTTTTCCGAGCCCTATTCCGCCCCATGCAAGCTCATCGTG TCAGCCCCCATCCTCCTCACCAACCTGGTCTGCATCCTTCTTGGATATGTATCGTCCTGTCTGACTACATATGTT TGTTGGAGCGAGGAATCATGCCAAGTTCTTGGCGATGCAATCCAGATCTTCATGCTCAACAGCGACCTCGTCACG CCATCACCACCCCCAGCTAGGAGGTGGACTCATAGGATGGCTTCGAGGCGCTTGATGCACGTCATCAGGCGGAGA ACGTGGCTCTGGACGTATACGCCCATCGCCCTTTTCTTAGCAGCGGCCACCCTCGCTTTCATAGTGCGCGGTGGT CCGCTGTATCTACAGTAAGCATCTTTCGCGAGCCCGAGTCTTCCCCGGAATACTCACCAGCACCAGCACTGAAAT AGGCGTCGAGTTTGGGTTCGGGGAAAGGCTCAAAAACAGCCTCATCGGATTACGAGGCGGTATGAAACCAGGCAA GGGCGAACAGGCCTTGGTTGTCTACCCTATCCTGGCAAACATGGCGCAGCTTGTCGTATCATGCTCTTACTTCGT TTTCAGCTCGCTATACTCTACGATATTTCAAGCAAAGTTTTGGGCAGACTTCTCGACCCGTCCCCAGCGTTTGCG GGTCAGCTTCCCTCACGCCGACCAGCAGGCCACCTACATATTCAAATATCCGTTCGCCTGGGGTCTAGGGCTCAC TATGCTCAAGGCAGCGGTCGGGTGGGCGACAAGCCAATCTCTCTATGTAGTTACGATTGCAAGTGAGTGTCACAC CACTCTTTCTTCGGCTTGGTAAACTGAGTTCCGCAGATATAAACAGGTGGCGGCCGGATGTTGGCGCCGAGAATA TCGACATCTACTTTGGGTACTCCTTCAAGGCAATCCTTGCCGTCATTTGCATCAGCCCCGTCGCTGCTTTAACGC CTCTCTTCATTGGCAAGAGCTATCTGCCGTCAGACTCGCTGATTGTGGGCACCGCCTCTGCAGCCATCGCGGCTT TTTGTCCGCCCAGTGCACAACTCGGCGAACCTTGTGAGGCAATCATGAGGCAACCAGACCGAAGTACGGCCTGGG ATCGTGTCTGGGTGCAGCGCAGACACCTGCAGCCTCTCAGGTGGGGCGTGTTAAAGCTCGGTCGTGCAACAGACG GGAGCCCAGAGGCCCTGGGTCTTGGATCCGAAGAGGAAATACTATGTCCGCCCCAAGTCGGGAACATATACGTTC CAGTCGCTTTCCATACGGCAATTGTGTCGGGCAGGAGCAGGCTTGCATATATCAACGCACCCCCTATCCAGGATG GGGACCAATTCGTCTTGAGGAGCGGAAATGGTCGACTTGATTCAAAAGCGAACGTCGAAACATTCAAGTTAGTGG CTGGGTGGCGAGCGCTGCGGTCGTTTACGTGCAGCAACGCCTTCACCCTTTACCTTGTTACTATTCTATGCCCAC GGCTCAAGCTGGCTTGGGCAATGTCGAGGCCGGGCCATGACCAGAGTGAACAGCAGAGGCCCTCACCCTGA |