Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7422
Gene name
LocationContig_43:53329..53676
Strand-
Gene length (bp)347
Transcript length (bp)219
Coding sequence length (bp)219
Protein length (aa) 73

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09813 Coiled-coil_56 Coiled-coil domain-containing protein 56 1.4E-04 29 59

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q758B5|COA3_ASHGO Cytochrome c oxidase assembly factor 3, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COA3 PE=3 SV=1 6 72 7.0E-11
sp|Q6CHT7|COA3_YARLI Cytochrome c oxidase assembly factor 3, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COA3 PE=3 SV=1 11 70 8.0E-10
sp|C5E368|COA3_LACTC Cytochrome c oxidase assembly factor 3, mitochondrial OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=COA3 PE=3 SV=1 1 63 2.0E-09
sp|Q6CLM9|COA3_KLULA Cytochrome c oxidase assembly factor 3, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=COA3 PE=3 SV=1 6 72 1.0E-07
sp|A5DLM7|COA3_PICGU Cytochrome c oxidase assembly factor 3, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=COA3 PE=3 SV=2 5 63 2.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|Q758B5|COA3_ASHGO Cytochrome c oxidase assembly factor 3, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COA3 PE=3 SV=1 6 72 7.0E-11
sp|Q6CHT7|COA3_YARLI Cytochrome c oxidase assembly factor 3, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COA3 PE=3 SV=1 11 70 8.0E-10
sp|C5E368|COA3_LACTC Cytochrome c oxidase assembly factor 3, mitochondrial OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=COA3 PE=3 SV=1 1 63 2.0E-09
sp|Q6CLM9|COA3_KLULA Cytochrome c oxidase assembly factor 3, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=COA3 PE=3 SV=1 6 72 1.0E-07
sp|A5DLM7|COA3_PICGU Cytochrome c oxidase assembly factor 3, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=COA3 PE=3 SV=2 5 63 2.0E-07
sp|A7TQM5|COA3_VANPO Cytochrome c oxidase assembly factor 3, mitochondrial OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=COA3 PE=3 SV=1 6 71 4.0E-07
sp|C5E1G5|COA3_ZYGRC Cytochrome c oxidase assembly factor 3, mitochondrial OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) GN=COA3 PE=3 SV=1 1 63 6.0E-07
sp|A3LWK1|COA3_PICST Cytochrome c oxidase assembly factor 3, mitochondrial OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=COA3 PE=3 SV=1 5 63 1.0E-06
sp|B9WK46|COA3_CANDC Cytochrome c oxidase assembly factor 3, mitochondrial OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=COA3 PE=3 SV=1 1 63 2.0E-06
sp|C4YTL7|COA3_CANAW Cytochrome c oxidase assembly factor 3, mitochondrial OS=Candida albicans (strain WO-1) GN=COA3 PE=3 SV=1 1 63 2.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7422
MVGAHSTYYDRRLRQGPALIRARRPYLLKNSLTGLGLLAVAGGIYYYTLRAVGQDDFDDVKVPQPPQQPELR*
Coding >Hirsu2|7422
ATGGTCGGCGCGCACTCGACCTACTACGACCGCCGCCTACGGCAAGGCCCGGCACTCATCCGTGCCCGACGCCCC
TACCTGCTCAAGAACTCGCTCACGGGACTGGGACTGCTTGCGGTCGCCGGCGGCATCTACTACTACACCCTCAGG
GCCGTCGGCCAGGACGACTTCGATGATGTCAAGGTTCCCCAACCGCCTCAACAGCCGGAACTGAGATAG
Transcript >Hirsu2|7422
ATGGTCGGCGCGCACTCGACCTACTACGACCGCCGCCTACGGCAAGGCCCGGCACTCATCCGTGCCCGACGCCCC
TACCTGCTCAAGAACTCGCTCACGGGACTGGGACTGCTTGCGGTCGCCGGCGGCATCTACTACTACACCCTCAGG
GCCGTCGGCCAGGACGACTTCGATGATGTCAAGGTTCCCCAACCGCCTCAACAGCCGGAACTGAGATAG
Gene >Hirsu2|7422
ATGGTCGGGTAAGCAAGTCGTTCTTCTCTCCCGCTCTCGTCCCCCGCAATCAAGTCGACCGCTGATCGACCATAT
CCGCCTCAGCGCGCACTCGACCTACTACGACCGCCGCCTACGGCAAGGCCCGGCACTCATCCGTGCCCGACGCCC
CTACCTGCTCAAGAACTCGCTCACGGGACTGGGACTGCTTGCGGTCGCCGGCGGCATCTGTACGTTGCGCCACCA
CCCGAGGCCGTGTCCTACGCTGACACGCTGCCGGAGACTACTACACCCTCAGGGCCGTCGGCCAGGACGACTTCG
ATGATGTCAAGGTTCCCCAACCGCCTCAACAGCCGGAACTGAGATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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