Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7375
Gene name
LocationContig_426:332..1801
Strand-
Gene length (bp)1469
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.8E-33 24 384
PF00083 Sugar_tr Sugar (and other) transporter 5.4E-07 47 166

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P25351|YCR3_YEAST Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 11 366 5.0E-53
sp|Q8RWN2|ZIF1_ARATH Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 8 357 4.0E-38
sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 11 381 4.0E-37
sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 8 364 1.0E-34
sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 18 221 4.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|P25351|YCR3_YEAST Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 11 366 5.0E-53
sp|Q8RWN2|ZIF1_ARATH Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 8 357 4.0E-38
sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 11 381 4.0E-37
sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 8 364 1.0E-34
sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 18 221 4.0E-10
sp|P51564|TCR8_PASMD Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 33 176 5.0E-10
sp|Q0P5M9|MFS10_BOVIN Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 47 293 2.0E-09
sp|P02981|TCR3_ECOLX Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 33 175 6.0E-09
sp|P33733|TCR4_SALOR Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 18 175 2.0E-08
sp|Q07282|TCR5_ECOLX Tetracycline resistance protein, class E OS=Escherichia coli GN=tetA PE=3 SV=1 20 243 4.0E-08
sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1 33 167 5.0E-08
sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3 SV=1 33 167 5.0E-08
sp|P02982|TCR1_ECOLX Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 6 166 1.0E-07
sp|B4EYY4|MDTG_PROMH Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 29 167 1.0E-07
sp|Q14728|MFS10_HUMAN Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 47 245 1.0E-07
sp|D8MQN9|MDTG_ERWBE Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 28 167 3.0E-07
sp|Q5HHX4|NORA_STAAC Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 33 176 3.0E-07
sp|P0A0J6|NORA_STAAW Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 33 176 3.0E-07
sp|P0A0J7|NORA_STAAU Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 33 176 3.0E-07
sp|P0A0J5|NORA_STAAN Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 33 176 3.0E-07
sp|P0A0J4|NORA_STAAM Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 33 176 3.0E-07
sp|Q6GBD5|NORA_STAAS Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 33 176 3.0E-07
sp|Q9D2V8|MFS10_MOUSE Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 47 175 4.0E-07
sp|Q6GIU7|NORA_STAAR Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 33 176 6.0E-07
sp|P58120|PMRA_LACLA Multi-drug resistance efflux pump PmrA homolog OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=pmrA PE=3 SV=1 29 167 1.0E-06
sp|A8GCZ5|MDTG_SERP5 Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 29 167 2.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 85 104 19
2 144 166 22
3 187 209 22
4 338 360 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7375
MTEASPSRPRLPVQQLAILVVVRLAEPLAYTSIYPYLPEMIRGFGVRQNEVAKWAGLTTAVFAISQGLAAVPWGR
ASDRYGRKPVILCGLASTMVCFVAWGMSTSLPMAMAARAVQGAGNGNVAIIRTVVAEIVPVKELQPRAFSIMPLV
WSVGSVIGPAFGGFLAQPAVKYPHLFGHIHFFQRFPYALPNLVATLFFLVSAAAAILFLQESLPSKRDEPDAGLE
LGKRISRLFRRTRSPPSGRRPFADGEAALPSRLAEAQSKKARSPEPPPRVKEILTRQTSISLLTYTILCLHSVAF
DQNITVFLNYPVVEHTPDNTKLPFYFTGGFGLESNRIGTLFAVYGITCGLIQFIIYPSLVRKYGILKCWNFCGPS
SLPFISSLTHCPQQALPPLFPLDSEFMLSDRPADRRS*
Coding >Hirsu2|7375
ATGACGGAGGCTTCGCCGTCGAGGCCCAGGCTGCCCGTCCAGCAGCTGGCCATCCTCGTCGTCGTGCGGCTCGCC
GAGCCCCTGGCTTACACCTCCATCTACCCCTACCTGCCCGAGATGATCCGGGGCTTCGGCGTGCGGCAGAACGAG
GTGGCCAAGTGGGCCGGCCTCACCACCGCCGTCTTCGCCATCTCCCAGGGCCTGGCCGCCGTCCCCTGGGGCCGC
GCCTCGGACCGCTACGGCCGGAAGCCCGTCATCCTGTGCGGCCTGGCCAGCACCATGGTCTGCTTCGTCGCCTGG
GGCATGTCCACCAGCCTGCCCATGGCCATGGCCGCCCGCGCCGTCCAGGGCGCCGGCAACGGGAACGTCGCCATC
ATCCGCACCGTCGTCGCCGAGATCGTCCCGGTCAAGGAGCTGCAGCCGCGCGCCTTTTCCATCATGCCCCTGGTC
TGGTCCGTCGGCTCCGTCATCGGCCCGGCCTTCGGCGGCTTCCTGGCCCAGCCGGCCGTCAAGTACCCTCACCTC
TTCGGCCACATCCACTTCTTCCAGCGCTTCCCCTACGCCCTGCCCAACCTCGTCGCCACCCTCTTCTTCCTCGTC
TCCGCCGCTGCCGCCATCCTCTTCCTTCAGGAATCGCTGCCGAGCAAGCGCGACGAGCCCGACGCCGGCCTGGAG
CTGGGGAAGCGCATCTCGCGCCTCTTCCGCCGCACGAGGTCGCCGCCGTCTGGCCGGCGGCCGTTCGCTGACGGA
GAGGCCGCCCTGCCGTCGCGTCTGGCCGAGGCGCAGTCGAAAAAGGCGCGGTCGCCGGAGCCGCCGCCGAGGGTC
AAGGAGATCCTGACGCGCCAGACGTCCATCAGCCTGCTGACCTACACCATCCTGTGCCTGCACTCGGTCGCCTTC
GACCAGAACATCACCGTCTTCCTCAACTACCCCGTCGTCGAGCACACGCCCGACAACACCAAGCTCCCCTTCTAC
TTCACCGGCGGCTTCGGCCTCGAGTCCAACCGGATCGGCACCCTCTTCGCCGTCTACGGCATCACCTGCGGCCTC
ATCCAGTTCATCATCTACCCGTCCCTGGTCAGGAAGTACGGCATTCTCAAGTGCTGGAATTTCTGCGGTCCGTCT
TCTCTCCCCTTCATCTCCTCCCTCACCCACTGCCCACAGCAGGCCCTCCCCCCCCTATTCCCGCTCGATTCCGAG
TTCATGCTATCCGATCGGCCCGCTGACCGGCGGAGCTGA
Transcript >Hirsu2|7375
ATGACGGAGGCTTCGCCGTCGAGGCCCAGGCTGCCCGTCCAGCAGCTGGCCATCCTCGTCGTCGTGCGGCTCGCC
GAGCCCCTGGCTTACACCTCCATCTACCCCTACCTGCCCGAGATGATCCGGGGCTTCGGCGTGCGGCAGAACGAG
GTGGCCAAGTGGGCCGGCCTCACCACCGCCGTCTTCGCCATCTCCCAGGGCCTGGCCGCCGTCCCCTGGGGCCGC
GCCTCGGACCGCTACGGCCGGAAGCCCGTCATCCTGTGCGGCCTGGCCAGCACCATGGTCTGCTTCGTCGCCTGG
GGCATGTCCACCAGCCTGCCCATGGCCATGGCCGCCCGCGCCGTCCAGGGCGCCGGCAACGGGAACGTCGCCATC
ATCCGCACCGTCGTCGCCGAGATCGTCCCGGTCAAGGAGCTGCAGCCGCGCGCCTTTTCCATCATGCCCCTGGTC
TGGTCCGTCGGCTCCGTCATCGGCCCGGCCTTCGGCGGCTTCCTGGCCCAGCCGGCCGTCAAGTACCCTCACCTC
TTCGGCCACATCCACTTCTTCCAGCGCTTCCCCTACGCCCTGCCCAACCTCGTCGCCACCCTCTTCTTCCTCGTC
TCCGCCGCTGCCGCCATCCTCTTCCTTCAGGAATCGCTGCCGAGCAAGCGCGACGAGCCCGACGCCGGCCTGGAG
CTGGGGAAGCGCATCTCGCGCCTCTTCCGCCGCACGAGGTCGCCGCCGTCTGGCCGGCGGCCGTTCGCTGACGGA
GAGGCCGCCCTGCCGTCGCGTCTGGCCGAGGCGCAGTCGAAAAAGGCGCGGTCGCCGGAGCCGCCGCCGAGGGTC
AAGGAGATCCTGACGCGCCAGACGTCCATCAGCCTGCTGACCTACACCATCCTGTGCCTGCACTCGGTCGCCTTC
GACCAGAACATCACCGTCTTCCTCAACTACCCCGTCGTCGAGCACACGCCCGACAACACCAAGCTCCCCTTCTAC
TTCACCGGCGGCTTCGGCCTCGAGTCCAACCGGATCGGCACCCTCTTCGCCGTCTACGGCATCACCTGCGGCCTC
ATCCAGTTCATCATCTACCCGTCCCTGGTCAGGAAGTACGGCATTCTCAAGTGCTGGAATTTCTGCGGTCCGTCT
TCTCTCCCCTTCATCTCCTCCCTCACCCACTGCCCACAGCAGGCCCTCCCCCCCCTATTCCCGCTCGATTCCGAG
TTCATGCTATCCGATCGGCCCGCTGACCGGCGGAGCTGA
Gene >Hirsu2|7375
ATGACGGAGGCTTCGCCGTCGAGGCCCAGGCTGCCCGTCCAGCAGCTGGCCATCCTCGGCAAGTCTGCCCGCGGG
AACAGGCCCTCCGCTGTCCTGTCGTCCTTCTTCCTCGCCATTCCCGCGCTGGTTGCTGACGTCTCTCGGCCGACA
GTCGTCGTGCGGCTCGCCGAGCCCCTGGCTTACACCTCCATCTACCCCTACCTGCCCGAGATGATCCGGGGCTTC
GGCGTGCGGCAGAACGAGGTGGCCAAGTGGGCCGGCCTCACCACCGCCGTCTTCGCCATCTCCCAGGGCCTGGCC
GCCGTCCCCTGGGGCCGCGCCTCGGACCGCTACGGCCGGAAGCCCGTCATCCTGTGCGGCCTGGCCAGCACCATG
GTCTGCTTCGTCGCCTGGGGCATGTCCACCAGCCTGCCCATGGCCATGGCCGCCCGCGCCGTCCAGGGCGCCGGC
AACGGGAACGGTGCCCTCTCCTTTGCATTCCTCCTCCTCCTCTAGCAACGGCCGTGGCCGCTGACCGCCCGCAGT
CGCCATCATCCGCACCGTCGTCGCCGAGATCGTCCCGGTCAAGGAGCTGCAGCCGCGCGCCTTTTCCATCATGCC
CCTGGTCTGGTCCGTCGGCTCCGTCATCGGCCCGGCCTTCGGCGGCTTCCTGGCCCAGCCGGCCGTCAAGTACCC
TCACCTCTTCGGCCACATCCACTTCTTCCAGCGCTTCCCCTACGCCCTGCCCAACCTCGTCGCCACCCTCTTCTT
CCTCGTCTCCGCCGCTGCCGCCATCCTCTTCCTTCAGGTACACCGCTCTCCNNNNCCCCCCTTTTTTTTTTCTTC
GGCCCGCACCAGCCACCTGACCGGATCCTGTCCAGGAATCGCTGCCGAGCAAGCGCGACGAGCCCGACGCCGGCC
TGGAGCTGGGGAAGCGCATCTCGCGCCTCTTCCGCCGCACGAGGTCGCCGCCGTCTGGCCGGCGGCCGTTCGCTG
ACGGAGAGGCCGCCCTGCCGTCGCGTCTGGCCGAGGCGCAGTCGAAAAAGGCGCGGTCGCCGGAGCCGCCGCCGA
GGGTCAAGGAGATCCTGACGCGCCAGACGTCCATCAGCCTGCTGACCTACACCATCCTGTGCCTGCACTCGGTCG
CCTTCGACCAGAACATCACCGTCTTCCTCAACTACCCCGTCGTCGAGCACACGCCCGACAACACCAAGCTCCCCT
TCTACTTCACCGGCGGCTTCGGCCTCGAGTCCAACCGGATCGGCACCCTCTTCGCCGTCTACGGCATCACCTGCG
GCCTCATCCAGTTCATCATCTACCCGTCCCTGGTCAGGAAGTACGGCATTCTCAAGTGCTGGAATTTCTGCGGTC
CGTCTTCTCTCCCCTTCATCTCCTCCCTCACCCACTGCCCACAGCAGGCCCTCCCCCCCCTATTCCCGCTCGATT
CCGAGTTCATGCTATCCGATCGGCCCGCTGACCGGCGGAGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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