Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7363
Gene name
LocationContig_424:2218..3601
Strand-
Gene length (bp)1383
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 15 36 21
2 49 71 22
3 93 115 22
4 128 150 22
5 174 196 22
6 209 231 22
7 244 266 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7363
MAFELQKHPTQMAHFVAVLVFSPLSIAVVLLRLVAVPRSGRRLGLEDALAAVATLFAVLTNLGGQVAITILNGRE
ISEKIAQSPSDFGHMRRWDMAALFFYMTHSLAVKLSVLALYRRIFGIDRAYRLCIYALAAAQTMLLVIFCIFQPL
QCRPSGRYFDFSIPGTCRSEGSVILGFDAPNSLIDFAMVALAWRMIRPLHLSTAVKWRLRLVFGMGMLVGIIGFI
KIAITYSPSAIYAFSMASIWTSVQMFVSVLCCCLPALHPFLPTADSWRRIYWRLTDRSSGKHGSAARPWAGAANT
PDQIPSHDRIELGSDASGLAQSELVDRPKAVALSHS*
Coding >Hirsu2|7363
ATGGCGTTCGAGCTGCAGAAGCACCCGACGCAGATGGCGCACTTCGTCGCCGTCCTCGTCTTCTCGCCGCTGTCC
ATCGCCGTCGTGCTGCTGCGGCTCGTGGCCGTCCCCCGCAGTGGCCGCCGCCTCGGGCTCGAAGACGCGCTGGCC
GCCGTCGCCACGCTGTTCGCCGTCCTGACGAACCTGGGCGGCCAGGTCGCCATCACTATCCTTAACGGGCGCGAG
ATCAGCGAGAAAATTGCCCAGAGTCCATCCGACTTTGGCCATATGCGCCGTTGGGATATGGCTGCCCTCTTCTTC
TACATGACGCACAGCCTCGCCGTCAAGCTCAGCGTCCTCGCCCTCTACCGCCGCATCTTCGGCATCGACCGCGCC
TATCGGCTCTGCATCTACGCCCTGGCCGCCGCGCAGACGATGCTCCTCGTCATCTTCTGCATCTTCCAGCCCCTG
CAGTGCCGGCCCTCGGGCCGCTACTTCGACTTCTCTATCCCGGGCACCTGCCGCAGCGAGGGCTCCGTCATCCTC
GGCTTCGACGCGCCCAACTCGCTCATCGACTTCGCCATGGTGGCCCTCGCCTGGAGGATGATTCGCCCGCTCCAT
CTGTCGACGGCGGTCAAGTGGCGGCTCCGGCTCGTCTTTGGCATGGGAATGCTCGTGGGAATCATAGGCTTCATC
AAGATCGCCATCACCTACTCCCCCAGCGCCATCTACGCTTTCAGCATGGCCTCCATCTGGACCAGTGTCCAGATG
TTCGTCTCCGTGCTCTGCTGCTGCCTGCCCGCCCTCCACCCCTTCCTGCCGACCGCCGATTCCTGGAGGCGCATC
TACTGGCGCCTGACGGATCGCTCGAGCGGCAAGCACGGCTCGGCAGCCCGGCCGTGGGCCGGTGCGGCAAACACG
CCGGACCAGATCCCGAGCCACGACCGCATAGAACTCGGCAGTGACGCGAGCGGCCTCGCTCAGTCCGAACTGGTA
GACAGGCCCAAGGCGGTCGCTCTGAGCCATTCTTGA
Transcript >Hirsu2|7363
ATGGCGTTCGAGCTGCAGAAGCACCCGACGCAGATGGCGCACTTCGTCGCCGTCCTCGTCTTCTCGCCGCTGTCC
ATCGCCGTCGTGCTGCTGCGGCTCGTGGCCGTCCCCCGCAGTGGCCGCCGCCTCGGGCTCGAAGACGCGCTGGCC
GCCGTCGCCACGCTGTTCGCCGTCCTGACGAACCTGGGCGGCCAGGTCGCCATCACTATCCTTAACGGGCGCGAG
ATCAGCGAGAAAATTGCCCAGAGTCCATCCGACTTTGGCCATATGCGCCGTTGGGATATGGCTGCCCTCTTCTTC
TACATGACGCACAGCCTCGCCGTCAAGCTCAGCGTCCTCGCCCTCTACCGCCGCATCTTCGGCATCGACCGCGCC
TATCGGCTCTGCATCTACGCCCTGGCCGCCGCGCAGACGATGCTCCTCGTCATCTTCTGCATCTTCCAGCCCCTG
CAGTGCCGGCCCTCGGGCCGCTACTTCGACTTCTCTATCCCGGGCACCTGCCGCAGCGAGGGCTCCGTCATCCTC
GGCTTCGACGCGCCCAACTCGCTCATCGACTTCGCCATGGTGGCCCTCGCCTGGAGGATGATTCGCCCGCTCCAT
CTGTCGACGGCGGTCAAGTGGCGGCTCCGGCTCGTCTTTGGCATGGGAATGCTCGTGGGAATCATAGGCTTCATC
AAGATCGCCATCACCTACTCCCCCAGCGCCATCTACGCTTTCAGCATGGCCTCCATCTGGACCAGTGTCCAGATG
TTCGTCTCCGTGCTCTGCTGCTGCCTGCCCGCCCTCCACCCCTTCCTGCCGACCGCCGATTCCTGGAGGCGCATC
TACTGGCGCCTGACGGATCGCTCGAGCGGCAAGCACGGCTCGGCAGCCCGGCCGTGGGCCGGTGCGGCAAACACG
CCGGACCAGATCCCGAGCCACGACCGCATAGAACTCGGCAGTGACGCGAGCGGCCTCGCTCAGTCCGAACTGGTA
GACAGGCCCAAGGCGGTCGCTCTGAGCCATTCTTGA
Gene >Hirsu2|7363
ATGGCGTTCGAGCTGCAGAAGCACCCGACGCAGATGGCGCACTTCGTCGCCGTCCTCGTCTTCTCGCCGCTGTCC
ATCGCCGTCGTGCTGCTGCGGCTCGTGGCCGTCCCCCGCAGTGGCCGCCGCCTCGGGCTCGAAGACGCGCTGGCC
GCCGTCGCCACGCTGTTCGCCGTCCTGACGAACCTGGGCGGCCAGGTCGGTCAGTCGGGCTCGTCCGAGTGCGCT
CGTCTGGCGCTGGCTGACTGTTGTTTCGCCCGCGGCAGCCATCACTATCCTTAACGGGCGCGAGATCAGCGAGAA
AATTGCCCAGAGTCCATCCGACTTTGGCCATATGCGCCGTGTATGTTGCACACTCTCATGAGCCCGTCTGTCTCT
TTTCTCTCTCCCTCTCCCTTTGTCTCTTCCTGTCTCCTTCTTTCTTCTGCTCCCTCCCTCCCCCCCTCTGCCCGA
GTCCAGTCATCTCATGCCCGCGAGTGAGGCCGTAGTGGGATATGGCTGCCCTCTTCTTCTACATGACGCACAGCC
TCGCCGTCAAGCTCAGCGTCCTCGCCCTCTACCGCCGCATCTTCGGCATCGACCGCGCCTATCGGCTCTGCATCT
ACGCCCTGGCCGCCGCGCAGACGATGCTCCTCGTCATCTTCTGCATCTTCCAGCCCCTGCAGTGCCGGCCCTCGG
GCCGCTACTTCGACTTCTCTATCCCGGGCACCTGCCGCAGCGAGGGCTCCGTCATCCTCGGCTTCGACGCGCCCA
ACTCGCTCATCGACTTCGCCATGGTGGCCCTCGCCTGGAGGATGATTCGCCCGCTCCATCTGTCGACGGCGGTCA
AGTGGCGGCTCCGGCTCGTCTTTGGCATGGGAATGCTGTACGTGAACACTCGATGTGCACATACGCACCCCCCCC
CTTTTTTTTCGCTCACGACGTTGACCTGTCCCCAGCGTGGGAATCATAGGCTTCATCAAGATCGCCATCACCTAC
TCCCCCAGCGCCATCTGTAAGTCCCCCGTGTCCCCCCGCCCTTGTCCGCTTCGATATGCCTCGTGCCGCTCACTG
CTCCCTCCACCCGCCTCTGCCGTGCACGCAGACGCTTTCAGCATGGCCTCCATCTGGACCAGTGTCCAGATGTTC
GTCTCCGTGCTCTGCTGCTGCCTGCCCGCCCTCCACCCCTTCCTGCCGACCGCCGATTCCTGGAGGCGCATCTAC
TGGCGCCTGACGGATCGCTCGAGCGGCAAGCACGGCTCGGCAGCCCGGCCGTGGGCCGGTGCGGCAAACACGCCG
GACCAGATCCCGAGCCACGACCGCATAGAACTCGGCAGTGACGCGAGCGGCCTCGCTCAGTCCGAACTGGTAGAC
AGGCCCAAGGCGGTCGCTCTGAGCCATTCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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