Protein ID | Hirsu2|7354 |
Gene name | |
Location | Contig_422:14942..15963 |
Strand | + |
Gene length (bp) | 1021 |
Transcript length (bp) | 873 |
Coding sequence length (bp) | 873 |
Protein length (aa) | 291 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13489 | Methyltransf_23 | Methyltransferase domain | 1.0E-11 | 37 | 174 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6892 | 0.4265 | 0.0336 | 0.0748 | 0.1213 | 0.0148 | 0.3099 | 0.1605 | 0.2362 | 0.0041 |
Orthofinder run ID | 4 |
Orthogroup | 158 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7354 LADAETRLPAPAAYAFPNDAPEQERLALQGECIKRLFGDRLHFAPLASSQPPKTILDIATGVGDWAIQMGDLFPD SLIIATDLSPIQPIHVPPNVRFYVEDSTDPWDFNQKFDYIHTRATSGCWSSFEKQIAEQAFAALEPGGWLESQEV DCTLLCDDGTVDPNGPVASWCRDMVLASDVVERPALLGCLLKEIFQRVGFVDVQQHVFKMPLNGWARDLTLKEIG WMWENNLSGGLGGLSYQLFNRVFDRTAAQIEVSLIDVRRDMADTRLHSYMPAFAVWGRKPHPGEF* |
Coding | >Hirsu2|7354 CTGGCTGACGCAGAGACGCGCCTGCCGGCCCCCGCAGCATACGCCTTCCCCAACGACGCCCCGGAGCAGGAGCGA CTGGCTCTGCAAGGCGAGTGCATCAAGCGCCTCTTCGGCGATAGGCTTCACTTTGCTCCGCTCGCCTCGTCACAG CCTCCCAAGACGATTCTTGATATTGCCACGGGCGTCGGCGACTGGGCCATCCAGATGGGCGATCTCTTCCCCGAC TCGCTCATCATCGCCACCGACCTCTCGCCGATCCAGCCTATACACGTGCCGCCCAACGTCCGCTTCTATGTCGAG GATTCGACCGATCCGTGGGACTTTAACCAGAAATTCGACTACATCCACACCCGCGCCACATCCGGCTGCTGGTCG TCGTTCGAGAAACAAATCGCCGAGCAGGCTTTTGCCGCTCTCGAGCCTGGCGGCTGGCTCGAGTCCCAGGAAGTG GACTGCACTTTGCTTTGCGATGACGGCACCGTCGACCCAAATGGGCCCGTCGCTAGTTGGTGCCGCGATATGGTC CTCGCATCCGACGTCGTCGAGCGCCCGGCCTTATTAGGCTGCCTGCTCAAGGAGATCTTTCAGCGCGTTGGCTTT GTTGATGTGCAGCAGCACGTCTTCAAGATGCCGCTCAATGGCTGGGCCCGAGACCTTACGCTCAAGGAGATAGGA TGGATGTGGGAGAATAATCTGTCGGGAGGCTTGGGTGGTCTCTCCTACCAATTGTTCAACAGAGTCTTTGACCGG ACTGCTGCTCAGATTGAGGTCTCCTTGATCGACGTACGACGTGACATGGCCGATACACGCCTGCATTCGTACATG CCTGCCTTCGCTGTTTGGGGCAGAAAGCCACATCCCGGCGAGTTCTAA |
Transcript | >Hirsu2|7354 CTGGCTGACGCAGAGACGCGCCTGCCGGCCCCCGCAGCATACGCCTTCCCCAACGACGCCCCGGAGCAGGAGCGA CTGGCTCTGCAAGGCGAGTGCATCAAGCGCCTCTTCGGCGATAGGCTTCACTTTGCTCCGCTCGCCTCGTCACAG CCTCCCAAGACGATTCTTGATATTGCCACGGGCGTCGGCGACTGGGCCATCCAGATGGGCGATCTCTTCCCCGAC TCGCTCATCATCGCCACCGACCTCTCGCCGATCCAGCCTATACACGTGCCGCCCAACGTCCGCTTCTATGTCGAG GATTCGACCGATCCGTGGGACTTTAACCAGAAATTCGACTACATCCACACCCGCGCCACATCCGGCTGCTGGTCG TCGTTCGAGAAACAAATCGCCGAGCAGGCTTTTGCCGCTCTCGAGCCTGGCGGCTGGCTCGAGTCCCAGGAAGTG GACTGCACTTTGCTTTGCGATGACGGCACCGTCGACCCAAATGGGCCCGTCGCTAGTTGGTGCCGCGATATGGTC CTCGCATCCGACGTCGTCGAGCGCCCGGCCTTATTAGGCTGCCTGCTCAAGGAGATCTTTCAGCGCGTTGGCTTT GTTGATGTGCAGCAGCACGTCTTCAAGATGCCGCTCAATGGCTGGGCCCGAGACCTTACGCTCAAGGAGATAGGA TGGATGTGGGAGAATAATCTGTCGGGAGGCTTGGGTGGTCTCTCCTACCAATTGTTCAACAGAGTCTTTGACCGG ACTGCTGCTCAGATTGAGGTCTCCTTGATCGACGTACGACGTGACATGGCCGATACACGCCTGCATTCGTACATG CCTGCCTTCGCTGTTTGGGGCAGAAAGCCACATCCCGGCGAGTTCTAA |
Gene | >Hirsu2|7354 CTGGCTGACGCAGAGACGCGCCTGCCGGCCCCCGCAGCATACGCCTTCCCCAACGACGCCCCGGAGCAGGAGCGA CTGGCTCTGCAAGGCGAGTGCATCAAGCGCCTCTTCGGCGATAGGCTTCACTTTGCTCCGCTCGCCTCGTCACAG CCTCCCAAGACGATTCTTGATATTGCCACGGGCGTCGGCGACTGGGCCATCCAGATGGGCGATCTCTTCCCCGAC TCGCTCATCATCGCCACCGACCTCTCGCCGATCCAGCCTATACACGTGCCGCCCAACGTCCGCTTCTATGTCGAG GATTCGTGAGTGATCCCCGTCTGCAGCTGACGCCGCGCGTCCTCTCGTCTAATTTGTTCCGCCCTCGAGCGTTGT CGCGCAGGACCGATCCGTGGGACTTTAACCAGAAATTCGACTACATCCACACCCGCGCCACATCCGGCTGCTGGT CGTCGTTCGAGAAACAAATCGCCGAGCAGGCTTTTGCCGCTCTCGAGCCTGGCGGCTGGCTCGAGTCCCAGGAAG TGGACTGCACTTTGCTTTGCGATGACGGCACCGTCGACCCAAATGGGCCCGTCGCTAGTTGGTGCCGCGATATGG TCCTCGCATCCGACGTCGTCGAGCGCCCGGCCTTATTAGGCTGCCTGCTCAAGGAGATCTTTCAGCGCGTTGGCT TTGTTGATGTGCAGCAGCACGTCTTCAAGATGCCGCTCAATGGCTGGGCCCGAGACCTTACGCTCAAGGAGATAG GATGGATGTGGGAGAATAATCTGTCGGGAGGCTTGGGTGGTCTCTCCTACCAATTGTTCAACAGAGTCTTTGACC GGACTGCTGCTCAGATTGAGGTACGCGCACTCTGCATCTTCCACGCTTCCCCCAGACTTTTTGGCCGTTTTTGCT CACCCTGATTGTCCAGGTCTCCTTGATCGACGTACGACGTGACATGGCCGATACACGCCTGCATTCGTACATGCC TGCCTTCGCTGTTTGGGGCAGAAAGCCACATCCCGGCGAGTTCTAA |