Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7346
Gene name
Location	Contig_421:10143..11336
Strand	-
Gene length (bp)	1193
Transcript length (bp)	1065
Coding sequence length (bp)	1065
Protein length (aa)	355

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13912	zf-C2H2_6	C2H2-type zinc finger	1.2E-02	281	297

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
C2H2 zinc finger

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7346 MPSGLQSNGQWLCQPCNELFDSWEALLAHKRTIRSSKVRNHIHCKHCGQDFKTGQAEFEHIKQFHPQDQQLVCPG CGQGPFARVSGLMGHIEGGQCSGLDIAVLDERREQRTEFSRRLQDFTDQPVRNNFTKYMAAPRTLGSTWLPKPED GVPAAASPSGSAEDEAKPAIDAATADWGARDDLPSGETKREEGEEDGWAKWNSLTTAAAAVPMAAGLASDAKLIT SMDVEHPDHPSFSAMKYYSPYIEQFTCPKLPCGKTFKKAGGLISHLRSEAHGNRTYRCPSCNRAFKSLKAIVSHA EQSSARCQVRESDNYVAFMDQLTAGVVDVSETPHDDGTIRYVSSGKSAGTTTDV*
Coding	>Hirsu2\|7346 ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGC TGCGGTCAAGGCCCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGAC ATCGCCGTCCTCGACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCG GTTCGCAACAACTTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGAC GGCGTCCCCGCCGCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCA GACTGGGGCGCGAGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAG TGGAACAGCCTCACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACG TCCATGGACGTGGAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTC ACCTGCCCCAAGCTGCCGTGCGGCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCG CACGGAAACAGGACGTACCGGTGCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCG GAGCAGAGCAGCGCGCGGTGCCAGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGC GTCGTCGACGTGTCGGAGACGCCCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACG ACGACGGATGTGTAA
Transcript	>Hirsu2\|7346 ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGC TGCGGTCAAGGCCCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGAC ATCGCCGTCCTCGACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCG GTTCGCAACAACTTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGAC GGCGTCCCCGCCGCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCA GACTGGGGCGCGAGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAG TGGAACAGCCTCACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACG TCCATGGACGTGGAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTC ACCTGCCCCAAGCTGCCGTGCGGCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCG CACGGAAACAGGACGTACCGGTGCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCG GAGCAGAGCAGCGCGCGGTGCCAGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGC GTCGTCGACGTGTCGGAGACGCCCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACG ACGACGGATGTGTAA
Gene	>Hirsu2\|7346 ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGGTGAGCGTGCTCCCTCTTCCTCTTTTTCCCTCTCCG GTCCGCATGGCTCAGTGTGCGCGGCAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGCTGCGGTCAAGGC CCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGACATCGCCGTCCTC GACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCGGTTCGCAACAAC TTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGACGGCGTCCCCGCC GCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCAGACTGGGGCGCG AGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAGTGGAACAGCCTC ACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACGTCCATGGACGTG GAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTCACCTGCCCCAAG CTGCCGTGCGGGTGAGTGCGGCCCCGGCCCCGAGCAGAGAGCTTGACCGGGTCGGCATCGCTGACGCGTGCGACA GCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCGCACGGAAACAGGACGTACCGGT GCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCGGAGCAGAGCAGCGCGCGGTGCC AGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGCGTCGTCGACGTGTCGGAGACGC CCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACGACGACGGATGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail