Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7346
Gene name
LocationContig_421:10143..11336
Strand-
Gene length (bp)1193
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13912 zf-C2H2_6 C2H2-type zinc finger 1.2E-02 281 297

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7346
MPSGLQSNGQWLCQPCNELFDSWEALLAHKRTIRSSKVRNHIHCKHCGQDFKTGQAEFEHIKQFHPQDQQLVCPG
CGQGPFARVSGLMGHIEGGQCSGLDIAVLDERREQRTEFSRRLQDFTDQPVRNNFTKYMAAPRTLGSTWLPKPED
GVPAAASPSGSAEDEAKPAIDAATADWGARDDLPSGETKREEGEEDGWAKWNSLTTAAAAVPMAAGLASDAKLIT
SMDVEHPDHPSFSAMKYYSPYIEQFTCPKLPCGKTFKKAGGLISHLRSEAHGNRTYRCPSCNRAFKSLKAIVSHA
EQSSARCQVRESDNYVAFMDQLTAGVVDVSETPHDDGTIRYVSSGKSAGTTTDV*
Coding >Hirsu2|7346
ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC
CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC
TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGC
TGCGGTCAAGGCCCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGAC
ATCGCCGTCCTCGACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCG
GTTCGCAACAACTTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGAC
GGCGTCCCCGCCGCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCA
GACTGGGGCGCGAGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAG
TGGAACAGCCTCACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACG
TCCATGGACGTGGAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTC
ACCTGCCCCAAGCTGCCGTGCGGCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCG
CACGGAAACAGGACGTACCGGTGCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCG
GAGCAGAGCAGCGCGCGGTGCCAGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGC
GTCGTCGACGTGTCGGAGACGCCCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACG
ACGACGGATGTGTAA
Transcript >Hirsu2|7346
ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC
CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC
TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGC
TGCGGTCAAGGCCCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGAC
ATCGCCGTCCTCGACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCG
GTTCGCAACAACTTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGAC
GGCGTCCCCGCCGCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCA
GACTGGGGCGCGAGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAG
TGGAACAGCCTCACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACG
TCCATGGACGTGGAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTC
ACCTGCCCCAAGCTGCCGTGCGGCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCG
CACGGAAACAGGACGTACCGGTGCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCG
GAGCAGAGCAGCGCGCGGTGCCAGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGC
GTCGTCGACGTGTCGGAGACGCCCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACG
ACGACGGATGTGTAA
Gene >Hirsu2|7346
ATGCCTTCTGGCCTGCAGAGCAACGGCCAGTGGCTCTGCCAGCCGTGCAACGAGCTTTTCGACAGCTGGGAGGCC
CTGCTGGCCCACAAGCGGACGATACGCTCGTCCAAAGTTCGCAATCACATCCACTGCAAGCACTGCGGCCAGGAC
TTCAAGACGGGCCAGGCCGAGTTTGAACACATCAAACAGGTGAGCGTGCTCCCTCTTCCTCTTTTTCCCTCTCCG
GTCCGCATGGCTCAGTGTGCGCGGCAGTTTCATCCCCAGGACCAGCAGCTCGTGTGTCCCGGCTGCGGTCAAGGC
CCCTTTGCCCGCGTGAGCGGCCTGATGGGCCACATCGAGGGAGGCCAGTGCTCCGGGCTCGACATCGCCGTCCTC
GACGAGCGGCGAGAGCAGCGAACCGAGTTCTCGAGAAGGCTGCAGGACTTTACGGACCAGCCGGTTCGCAACAAC
TTCACCAAATACATGGCCGCTCCGCGCACACTCGGCTCCACCTGGCTCCCCAAGCCGGAGGACGGCGTCCCCGCC
GCGGCCTCTCCGTCCGGATCTGCTGAGGACGAGGCGAAGCCGGCCATAGATGCGGCAACGGCAGACTGGGGCGCG
AGGGACGATTTGCCGTCGGGGGAGACGAAGCGCGAAGAAGGGGAAGAGGACGGCTGGGCCAAGTGGAACAGCCTC
ACGACGGCGGCGGCGGCGGTGCCGATGGCGGCGGGCTTGGCCTCTGACGCGAAGCTCATCACGTCCATGGACGTG
GAGCACCCGGACCACCCGTCGTTCAGTGCGATGAAGTACTACTCGCCCTACATCGAACAGTTCACCTGCCCCAAG
CTGCCGTGCGGGTGAGTGCGGCCCCGGCCCCGAGCAGAGAGCTTGACCGGGTCGGCATCGCTGACGCGTGCGACA
GCAAGACGTTCAAGAAGGCGGGCGGCCTGATCAGCCACCTCCGGTCCGAGGCGCACGGAAACAGGACGTACCGGT
GCCCGTCGTGCAACCGAGCGTTCAAGTCGCTCAAGGCCATCGTGTCCCACGCGGAGCAGAGCAGCGCGCGGTGCC
AGGTGCGCGAGTCGGACAACTACGTCGCCTTCATGGACCAGCTGACGGCCGGCGTCGTCGACGTGTCGGAGACGC
CCCACGACGACGGCACGATCCGATACGTGTCGTCGGGCAAGAGTGCCGGGACGACGACGGATGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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