Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7343
Gene name
LocationContig_421:3469..4573
Strand+
Gene length (bp)1104
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 1.2E-08 21 58

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7343
MPIIRNLDDVDELNGLAPRSCELCHGKEHVMRCSACQAVFYCSKACQTVDREDHKMPCKVIKKARLLYESEYEKL
RDKPGDVFTPERVFETAVGHFWGILDTRPYMRARYGFVDALLLSYGTAGGPVDVVQTALNHLLDMLRLCRSDNMG
VRDLIPALYIRLGRDQEAYDFVKWYATSGQDPEYDWGDMELPFLDVKDADLLEEPHENFLNEKWMSSLSHTVALM
LLKVRVLLDLQAVQNASVALCGAVPQEVVDLVRNQLVGSVIRARRDLLLAEPEETTRLVESLKCQIQQLHRVVKG
YNPHFWNLLVEDPDVGVLNRPNQYSTRSSEEAILVIGYSSAAWYETPGAVDVLRKLTKPTPMNHFHL*
Coding >Hirsu2|7343
ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC
GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC
CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG
CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC
GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC
CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC
GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC
GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC
CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG
CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG
CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC
GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG
TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA
ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC
GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA
Transcript >Hirsu2|7343
ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC
GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC
CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG
CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC
GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC
CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC
GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC
GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC
CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG
CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG
CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC
GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG
TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA
ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC
GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA
Gene >Hirsu2|7343
ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC
GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC
CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG
CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC
GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC
CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC
GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC
GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC
CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG
CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG
CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC
GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG
TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA
ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC
GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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