Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7343
Gene name
Location	Contig_421:3469..4573
Strand	+
Gene length (bp)	1104
Transcript length (bp)	1104
Coding sequence length (bp)	1104
Protein length (aa)	368

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01753	zf-MYND	MYND finger	1.7E-08	21	58

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7343 MPIIRNLDDVDELNGLAPRSCELCHGKEHVMRCSACQAVFYCSKACQTVDREDHKMPCKVIKKARLLYESEYEKL RDKPGDVFTPERVFETAVGHFWGILDTRPYMRARYGFVDALLLSYGTAGGPVDVVQTALNHLLDMLRLCRSDNMG VRDLIPALYIRLGRDQEAYDFVKWYATSGQDPEYDWGDMELPFLDVKDADLLEEPHENFLNEKWMSSLSHTVALM LLKVRVLLDLQAVQNASVALCGAVPQEVVDLVRNQLVGSVIRARRDLLLAEPEETTRLVESLKCQIQQLHRVVKG YNPHFWNLLVEDPDVGVLNRPNQYSTRSSEEAILVIGYSSAAWYETPGAVDVLRKLTKPTPMNHFHL*
Coding	>Hirsu2\|7343 ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA
Transcript	>Hirsu2\|7343 ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA
Gene	>Hirsu2\|7343 ATGCCAATCATACGGAACCTTGACGATGTGGATGAGCTCAACGGCCTCGCGCCGCGGTCCTGCGAGCTGTGCCAC GGCAAAGAACATGTCATGCGCTGCAGCGCCTGTCAAGCCGTCTTTTACTGCTCCAAGGCCTGCCAGACCGTGGAC CGAGAAGACCACAAGATGCCGTGCAAGGTAATCAAAAAGGCACGGCTGCTCTACGAAAGCGAGTACGAAAAACTG CGAGACAAGCCGGGCGACGTCTTCACGCCGGAAAGGGTGTTTGAAACGGCCGTCGGCCACTTTTGGGGCATCCTC GATACCCGTCCCTACATGCGTGCCCGCTACGGCTTCGTGGATGCGCTGCTGCTCAGCTACGGGACTGCCGGCGGC CCCGTCGATGTGGTGCAGACGGCGCTCAACCACTTGCTGGACATGCTCCGCCTGTGTCGCTCTGACAACATGGGC GTGCGAGACCTCATTCCCGCCCTGTACATCCGGCTCGGGAGAGACCAGGAGGCGTACGACTTCGTGAAATGGTAC GCTACCTCGGGCCAGGACCCGGAATACGACTGGGGCGATATGGAATTGCCCTTTCTTGACGTCAAGGACGCCGAC CTGCTGGAGGAACCGCACGAAAATTTCCTCAACGAAAAGTGGATGAGCTCCCTCAGCCACACGGTCGCCCTCATG CTCCTCAAGGTGCGAGTCCTGCTCGACCTCCAGGCTGTCCAGAACGCGAGCGTGGCTCTCTGTGGCGCCGTCCCG CAGGAAGTCGTCGATCTTGTCCGGAACCAGCTCGTCGGCAGCGTCATACGCGCCCGGCGGGATCTCCTGCTGGCC GAGCCGGAGGAGACGACGCGGCTGGTGGAATCGCTAAAATGTCAAATCCAGCAGCTACATCGTGTTGTGAAGGGG TACAACCCGCACTTCTGGAATCTGCTGGTTGAGGACCCAGACGTGGGTGTCTTGAATCGGCCGAACCAGTACTCA ACGCGCTCGAGCGAGGAGGCAATCCTGGTAATCGGGTACAGCTCTGCGGCCTGGTATGAGACGCCGGGAGCCGTC GACGTGCTAAGAAAGCTGACAAAGCCGACGCCAATGAACCACTTCCATCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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