© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7318 |
| Gene name | |
| Location | Contig_419:15075..15485 |
| Strand | - |
| Gene length (bp) | 410 |
| Transcript length (bp) | 345 |
| Coding sequence length (bp) | 345 |
| Protein length (aa) | 115 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0794 | 0.0552 | 0.9722 | 0.0745 | 0.1389 | 0.01 | 0.1091 | 0.0456 | 0.0223 | 0.0042 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.999487 |
| Orthofinder run ID | 4 |
| Orthogroup | 7675 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|7318 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7318 MKLSAALLTAAAGLAASRPLGNTINLDPTRPEEGFQPGTDPKPDRPFKVGLGANHVEVPKTSVPTLGPGVDTGEV PTRDIRTGEKAPFNVDGVTVDRVRGGIADISTPPKKQQQ* |
| Coding | >Hirsu2|7318 ATGAAGCTCTCCGCCGCCCTACTCACCGCCGCCGCTGGCCTCGCTGCCTCCAGGCCGCTGGGCAATACGATCAAC CTGGATCCGACCAGGCCAGAGGAAGGATTTCAGCCGGGGACGGACCCGAAGCCCGACCGGCCCTTCAAGGTCGGC TTAGGCGCGAATCACGTCGAGGTACCCAAGACGAGTGTGCCGACTCTCGGGCCAGGCGTCGACACGGGAGAGGTC CCGACCCGGGATATCAGGACGGGCGAAAAGGCCCCCTTCAACGTCGACGGCGTCACGGTCGACAGGGTCCGGGGA GGGATTGCAGACATTTCTACTCCCCCCAAGAAACAGCAGCAGTAG |
| Transcript | >Hirsu2|7318 ATGAAGCTCTCCGCCGCCCTACTCACCGCCGCCGCTGGCCTCGCTGCCTCCAGGCCGCTGGGCAATACGATCAAC CTGGATCCGACCAGGCCAGAGGAAGGATTTCAGCCGGGGACGGACCCGAAGCCCGACCGGCCCTTCAAGGTCGGC TTAGGCGCGAATCACGTCGAGGTACCCAAGACGAGTGTGCCGACTCTCGGGCCAGGCGTCGACACGGGAGAGGTC CCGACCCGGGATATCAGGACGGGCGAAAAGGCCCCCTTCAACGTCGACGGCGTCACGGTCGACAGGGTCCGGGGA GGGATTGCAGACATTTCTACTCCCCCCAAGAAACAGCAGCAGTAG |
| Gene | >Hirsu2|7318 ATGAAGCTCTCCGCCGCCCTACTCACCGCCGCCGCTGGCCTCGCTGCCTCCAGGCCGCTGGGCAATACGATCAAC CTGGATCCGACCAGGCCAGAGGAAGGATTTCAGCCGGGGACGGACCCGAAGCCCGACCGGCCCTTCAAGGTCGGC TTAGGCGCGAATCACGTCGAGGTACCCAAGACGAGTGTGCCGACTCTCGGGCCAGGCGTCGACACGGGAGAGGTC CCGACCCGGGATATCAGGACGGGCGAAAAGGCCCCCTTCAACGTCGACGGCGTCACGGTCGACAGGGTCCGGGGA GGGGTAAGTGGCGCGAAGCGGGCGAGCCGGGGGCGTCAGGGCATCGCTGATATTTATGACCCGCGCAGATTGCAG ACATTTCTACTCCCCCCAAGAAACAGCAGCAGTAG |