© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7307 |
| Gene name | |
| Location | Contig_417:3538..6726 |
| Strand | + |
| Gene length (bp) | 3188 |
| Transcript length (bp) | 2874 |
| Coding sequence length (bp) | 2874 |
| Protein length (aa) | 958 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07217 | Het-C | Heterokaryon incompatibility protein Het-C | 4.1E-238 | 11 | 569 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1787 | 0.1558 | 0.6677 | 0.1711 | 0.0428 | 0.032 | 0.5177 | 0.2723 | 0.1667 | 0.0036 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 25 | 0.999695 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 195 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7307 MPDFRNPGLLLGLILLVALASPAAAFGAGNIASISKIEGQNWRHGDIEDALLSLAMAQAMKGKKFSKIMVSRVYF GNWLRDYSQAIDVGTVKSVSAEAIRLLLCVLGFLTFGYGSGEFEVTAERLGCYRPEDHIDNPKNYADNKDARQFD SRLRGPIDEQRELAIDRESGMKNYIANERAGIMTSAQHVRRLFGGCIELGRRYKERGNKEDLYEALRLMGTGLHC LEDFFAHSNYTELTLIEMGERNVFPHCGSETLLELEGANGPVHPIVTGTFGGVDFLHSVVGEVSDKLTQNEIDEL EGTLQESKNADTSVLRDLLDKIPDGLFGDKNQSARIDEIQSNASSAQIQNMSVSPRDPEEFTLYVRQIYSQVMPV IQFHDDIMKGITNAVEKIPVLPKIIEQLEEQLSKFVFSIIAPFVVPLIHQIRNELRTGSDEIVHSSEQEQHVVFE NDRCDDPTHSMLSKDHFSNILNEVAGRTAAKMLHWVVPQLMDAIDDDSTDVNRLLTRIIYGVMHHPAQREMGQDG VREARQLIFESVQEWWSEMGEEQREDYRRKLSREGVQAGENHKEGVQDTGHGHGCAGKLKMRKLYGQPETLETKI AGAAADAIFQGATGAISGMVEQNTGVKLPSTHAASQQPEEQPEESGGFGGFISSILGGFGKNETEKQTSQRRNDD GSYTQTQTEYGHDGGRYGQAQYSQTQHPDGSSESRYSRYEQQESQHGGRQTEGYGYEERTETRPTYGGGYEQRTE RREYSGSNEESYGGGYQRRDEDSYGGGGGGGRHEGRSGYGGGGGSYERRDEDSYGSGGGGGGGGGGGYGRRDRDE DSYGGGSGSQSRRDEDSSYSGGSSSYGRHEQRSRREEESYGGGGGGGGYGRQEQRSRRDEDSSSSSRGRRTEGSY DDDDDNERRGGSGGGAGGYGRSERSGYGADYERDNDNDDDDEYGRENRRRGQGGYGY* |
| Coding | >Hirsu2|7307 ATGCCCGATTTCAGGAACCCGGGCCTGCTCTTGGGCCTCATCCTCCTCGTCGCCTTGGCCAGCCCGGCCGCGGCC TTTGGCGCCGGGAACATCGCCTCCATCTCCAAGATCGAGGGCCAGAACTGGCGACATGGCGACATCGAGGACGCC CTCCTCAGCCTGGCCATGGCCCAGGCCATGAAGGGCAAAAAGTTCAGCAAGATCATGGTGTCGCGCGTCTACTTT GGCAACTGGCTGCGTGACTACTCCCAGGCCATCGACGTCGGCACCGTCAAGTCCGTCTCGGCCGAGGCCATCCGC CTTCTGCTCTGCGTCCTCGGCTTCCTCACCTTCGGCTACGGCTCCGGCGAGTTCGAGGTGACGGCCGAGCGCCTC GGCTGCTACCGCCCCGAGGACCACATCGACAACCCCAAGAACTACGCCGACAACAAGGACGCCCGCCAGTTCGAC AGCCGCCTGCGCGGCCCCATCGATGAGCAGAGGGAGCTGGCCATCGACCGCGAATCGGGCATGAAGAATTACATC GCCAACGAGCGCGCCGGCATCATGACCTCGGCCCAGCACGTCCGCCGCCTCTTCGGCGGCTGCATCGAGCTCGGC CGCCGCTACAAGGAGCGCGGCAACAAGGAGGACCTGTACGAGGCCCTCCGCCTCATGGGCACCGGCCTCCACTGC CTCGAAGACTTCTTCGCACACAGCAACTACACCGAGCTGACCTTGATCGAGATGGGCGAGCGGAACGTCTTCCCT CACTGTGGAAGCGAGACGCTCCTCGAACTCGAGGGCGCCAATGGGCCCGTCCACCCCATCGTCACCGGCACCTTT GGCGGCGTCGATTTCCTCCACTCCGTCGTCGGCGAAGTCTCGGACAAGCTGACCCAGAACGAAATCGACGAGCTC GAAGGCACTCTGCAGGAGAGCAAGAACGCCGACACCAGCGTGCTGCGCGACCTCCTCGACAAGATCCCCGACGGC CTCTTCGGGGACAAGAACCAGAGCGCGAGGATCGACGAGATCCAGTCCAACGCGTCGTCGGCCCAGATCCAGAAC ATGTCCGTCTCCCCCCGTGACCCCGAGGAGTTCACCCTCTACGTCCGCCAGATCTACTCGCAGGTGATGCCCGTC ATCCAGTTCCACGACGACATCATGAAGGGCATCACCAACGCCGTCGAGAAGATCCCGGTGCTGCCCAAGATCATC GAGCAGCTCGAGGAGCAGCTGTCCAAATTCGTCTTCTCCATCATCGCCCCCTTCGTCGTGCCCCTGATCCACCAG ATCCGGAACGAGCTCCGGACCGGCTCCGACGAGATTGTCCACAGCAGCGAGCAGGAGCAGCACGTCGTCTTCGAG AACGACCGCTGCGACGACCCGACCCACTCCATGCTGTCCAAGGACCACTTCTCCAACATCCTGAACGAGGTCGCC GGGCGCACGGCGGCCAAGATGCTGCACTGGGTCGTCCCCCAGCTCATGGACGCCATCGACGACGACAGCACCGAC GTCAACCGGCTGCTGACGCGCATCATCTACGGCGTCATGCACCACCCCGCCCAGCGGGAGATGGGGCAGGACGGC GTCCGCGAGGCGCGCCAGCTGATCTTCGAGTCGGTCCAGGAGTGGTGGAGCGAGATGGGCGAGGAGCAGCGCGAG GACTACCGCCGGAAGCTGTCGCGCGAGGGCGTCCAGGCGGGCGAGAACCACAAGGAGGGCGTCCAGGACACGGGC CACGGCCACGGGTGCGCCGGCAAGCTCAAGATGCGCAAGCTGTACGGCCAGCCGGAGACGCTCGAGACCAAGATC GCGGGCGCGGCGGCCGACGCCATCTTCCAGGGCGCCACGGGCGCCATCTCGGGCATGGTGGAGCAGAACACGGGC GTGAAGCTGCCGTCGACGCACGCCGCCTCGCAGCAGCCGGAGGAGCAGCCGGAGGAGTCGGGCGGCTTCGGCGGC TTCATCAGCTCCATCCTCGGCGGCTTCGGCAAGAACGAGACGGAGAAGCAGACGAGCCAGCGGCGCAACGACGAC GGCTCGTACACGCAGACGCAGACCGAGTACGGCCACGACGGCGGCCGGTACGGCCAGGCCCAGTACAGCCAGACG CAGCACCCGGACGGCAGCAGCGAGTCCCGGTACAGCCGCTACGAGCAGCAGGAGTCGCAGCACGGCGGGCGGCAG ACGGAGGGGTACGGCTACGAGGAGAGGACGGAGACGCGGCCGACGTACGGCGGCGGCTACGAGCAGCGCACCGAG CGGCGCGAGTACAGCGGCTCCAACGAGGAAAGCTACGGCGGCGGCTACCAGCGCCGGGACGAGGACAGCTACGGC GGCGGCGGCGGCGGCGGGCGGCACGAGGGCCGCAGCGGGTACGGCGGCGGCGGCGGCAGCTATGAACGCCGGGAC GAGGACAGTTACGGCAGTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTACGGCCGTCGGGACCGGGACGAG GACAGCTACGGCGGCGGCAGCGGCAGCCAGTCCCGTCGGGACGAGGACAGCAGCTACAGTGGCGGCAGCAGCAGC TACGGCCGGCACGAGCAGCGATCCCGGCGGGAGGAAGAGAGCTACGGTGGCGGCGGCGGCGGCGGCGGCTACGGG CGGCAGGAGCAGAGATCCCGCCGGGACGAAGACAGCTCCAGCAGTAGCCGAGGACGCCGCACCGAGGGCAGCTAC GACGATGACGACGACAACGAGCGCCGTGGCGGATCCGGCGGCGGCGCGGGCGGTTACGGACGCAGCGAGCGAAGC GGATACGGGGCCGACTATGAGCGAGACAACGACAACGACGACGACGACGAGTACGGACGGGAGAACAGGCGGCGG GGCCAGGGCGGCTACGGCTACTAG |
| Transcript | >Hirsu2|7307 ATGCCCGATTTCAGGAACCCGGGCCTGCTCTTGGGCCTCATCCTCCTCGTCGCCTTGGCCAGCCCGGCCGCGGCC TTTGGCGCCGGGAACATCGCCTCCATCTCCAAGATCGAGGGCCAGAACTGGCGACATGGCGACATCGAGGACGCC CTCCTCAGCCTGGCCATGGCCCAGGCCATGAAGGGCAAAAAGTTCAGCAAGATCATGGTGTCGCGCGTCTACTTT GGCAACTGGCTGCGTGACTACTCCCAGGCCATCGACGTCGGCACCGTCAAGTCCGTCTCGGCCGAGGCCATCCGC CTTCTGCTCTGCGTCCTCGGCTTCCTCACCTTCGGCTACGGCTCCGGCGAGTTCGAGGTGACGGCCGAGCGCCTC GGCTGCTACCGCCCCGAGGACCACATCGACAACCCCAAGAACTACGCCGACAACAAGGACGCCCGCCAGTTCGAC AGCCGCCTGCGCGGCCCCATCGATGAGCAGAGGGAGCTGGCCATCGACCGCGAATCGGGCATGAAGAATTACATC GCCAACGAGCGCGCCGGCATCATGACCTCGGCCCAGCACGTCCGCCGCCTCTTCGGCGGCTGCATCGAGCTCGGC CGCCGCTACAAGGAGCGCGGCAACAAGGAGGACCTGTACGAGGCCCTCCGCCTCATGGGCACCGGCCTCCACTGC CTCGAAGACTTCTTCGCACACAGCAACTACACCGAGCTGACCTTGATCGAGATGGGCGAGCGGAACGTCTTCCCT CACTGTGGAAGCGAGACGCTCCTCGAACTCGAGGGCGCCAATGGGCCCGTCCACCCCATCGTCACCGGCACCTTT GGCGGCGTCGATTTCCTCCACTCCGTCGTCGGCGAAGTCTCGGACAAGCTGACCCAGAACGAAATCGACGAGCTC GAAGGCACTCTGCAGGAGAGCAAGAACGCCGACACCAGCGTGCTGCGCGACCTCCTCGACAAGATCCCCGACGGC CTCTTCGGGGACAAGAACCAGAGCGCGAGGATCGACGAGATCCAGTCCAACGCGTCGTCGGCCCAGATCCAGAAC ATGTCCGTCTCCCCCCGTGACCCCGAGGAGTTCACCCTCTACGTCCGCCAGATCTACTCGCAGGTGATGCCCGTC ATCCAGTTCCACGACGACATCATGAAGGGCATCACCAACGCCGTCGAGAAGATCCCGGTGCTGCCCAAGATCATC GAGCAGCTCGAGGAGCAGCTGTCCAAATTCGTCTTCTCCATCATCGCCCCCTTCGTCGTGCCCCTGATCCACCAG ATCCGGAACGAGCTCCGGACCGGCTCCGACGAGATTGTCCACAGCAGCGAGCAGGAGCAGCACGTCGTCTTCGAG AACGACCGCTGCGACGACCCGACCCACTCCATGCTGTCCAAGGACCACTTCTCCAACATCCTGAACGAGGTCGCC GGGCGCACGGCGGCCAAGATGCTGCACTGGGTCGTCCCCCAGCTCATGGACGCCATCGACGACGACAGCACCGAC GTCAACCGGCTGCTGACGCGCATCATCTACGGCGTCATGCACCACCCCGCCCAGCGGGAGATGGGGCAGGACGGC GTCCGCGAGGCGCGCCAGCTGATCTTCGAGTCGGTCCAGGAGTGGTGGAGCGAGATGGGCGAGGAGCAGCGCGAG GACTACCGCCGGAAGCTGTCGCGCGAGGGCGTCCAGGCGGGCGAGAACCACAAGGAGGGCGTCCAGGACACGGGC CACGGCCACGGGTGCGCCGGCAAGCTCAAGATGCGCAAGCTGTACGGCCAGCCGGAGACGCTCGAGACCAAGATC GCGGGCGCGGCGGCCGACGCCATCTTCCAGGGCGCCACGGGCGCCATCTCGGGCATGGTGGAGCAGAACACGGGC GTGAAGCTGCCGTCGACGCACGCCGCCTCGCAGCAGCCGGAGGAGCAGCCGGAGGAGTCGGGCGGCTTCGGCGGC TTCATCAGCTCCATCCTCGGCGGCTTCGGCAAGAACGAGACGGAGAAGCAGACGAGCCAGCGGCGCAACGACGAC GGCTCGTACACGCAGACGCAGACCGAGTACGGCCACGACGGCGGCCGGTACGGCCAGGCCCAGTACAGCCAGACG CAGCACCCGGACGGCAGCAGCGAGTCCCGGTACAGCCGCTACGAGCAGCAGGAGTCGCAGCACGGCGGGCGGCAG ACGGAGGGGTACGGCTACGAGGAGAGGACGGAGACGCGGCCGACGTACGGCGGCGGCTACGAGCAGCGCACCGAG CGGCGCGAGTACAGCGGCTCCAACGAGGAAAGCTACGGCGGCGGCTACCAGCGCCGGGACGAGGACAGCTACGGC GGCGGCGGCGGCGGCGGGCGGCACGAGGGCCGCAGCGGGTACGGCGGCGGCGGCGGCAGCTATGAACGCCGGGAC GAGGACAGTTACGGCAGTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTACGGCCGTCGGGACCGGGACGAG GACAGCTACGGCGGCGGCAGCGGCAGCCAGTCCCGTCGGGACGAGGACAGCAGCTACAGTGGCGGCAGCAGCAGC TACGGCCGGCACGAGCAGCGATCCCGGCGGGAGGAAGAGAGCTACGGTGGCGGCGGCGGCGGCGGCGGCTACGGG CGGCAGGAGCAGAGATCCCGCCGGGACGAAGACAGCTCCAGCAGTAGCCGAGGACGCCGCACCGAGGGCAGCTAC GACGATGACGACGACAACGAGCGCCGTGGCGGATCCGGCGGCGGCGCGGGCGGTTACGGACGCAGCGAGCGAAGC GGATACGGGGCCGACTATGAGCGAGACAACGACAACGACGACGACGACGAGTACGGACGGGAGAACAGGCGGCGG GGCCAGGGCGGCTACGGCTACTAG |
| Gene | >Hirsu2|7307 ATGCCCGATTTCAGGAACCCGGGCCTGCTCTTGGGCCTCATCCTCCTCGTCGCCTTGGCCAGCCCGGCCGCGGCC TTTGGCGCCGGGAACATCGCCTCCATCTCCAAGATCGAGGGCCAGAACTGTGCGCTCTTCCCCCTGCCGCCCCTC TCTCTCGTGGACGCCTGGCTGACCGCTTCTCCGCCTCCCCGCAGGGCGACATGGCGACATCGAGGACGCCCTCCT CAGCCTGGCCATGGCCCAGGCCATGAAGGGCAAAAAGTTCAGCAAGATCATGGTGTCGCGCGTCTACTTTGGCAA CTGGCTGCGTGACTACTCCCAGGCCATCGACGTCGGCACCGTCAAGTCCGTCTCGGCCGAGGCCATCCGCCTTCT GCTCTGCGTCCTCGGCTTCCTCACCTTCGGCTACGGCTCCGGCGAGTTCGAGGTGACGGCCGAGCGCCTCGGCTG CTACCGCCCCGAGGACCACATCGACAACCCCAAGAACTACGCCGACAACAAGGACGCCCGCCAGTTCGACAGCCG CCTGCGCGGCCCCATCGATGAGCAGAGGGAGCTGGCCATCGACCGCGAATCGGGCATGAAGAATTACATCGCCAA CGAGCGCGCCGGCATCATGACCTCGGCCCAGCACGTCCGCCGCCTCTTCGGCGGCTGCATCGAGCTCGGCCGCCG CTACAAGGAGCGCGGCAACAAGGAGGACCTGTACGAGGCCCTCCGCCTCATGGGCACCGGCCTCCACTGCCTCGA AGGTTGGCCCCTCGCCGCCCCATTCCGGGCTTCGTTTCGCGCCCTCGCTGACGGCAGAGACGAAACAGACTTCTT CGCACACAGCAACTACACCGAGCTGACCTTGATCGAGATGGGCGAGCGGAACGTCTTCCCTCACTGTGGAAGCGA GACGCTCCTCGAACTCGAGGGCGCCAATGGGCCCGTCCACCCCATCGTCACCGGCACCTTTGGCGGCGTCGATTT CCTCCACTCCGTCGTCGGCGAAGGTCGGTCCACCACGCCGCCCACCCGCCTCCGGACGCCGTGCTGACCCCGTCT CGCAGTCTCGGACAAGCTGACCCAGAACGAAATCGACGAGCTCGAAGGCACTCTGCAGGAGAGCAAGAACGCCGA CACCAGCGTGCTGCGCGACCTCCTCGACAAGATCCCCGACGGCCTCTTCGGGGACAAGAACCAGAGCGCGAGGAT CGACGAGATCCAGTCCAACGCGTCGTCGGCCCAGATCCAGAACATGTCCGTCTCCCCCCGTGACCCCGAGGAGTT CACCCTCTACGTCCGCCAGATCTACTCGCAGGTGATGCCCGTCATCCAGTTCCACGACGACATCATGAAGGGCAT CACCAACGCCGTCGAGAAGATCCCGGTGCTGCCCAAGATCATCGAGCAGCTCGAGGAGCAGCTGTCCAAATTCGT CTTCTCCATCATCGCCCCCTTCGTCGTGCCCCTGATCCACCAGATCCGGAACGAGCTCCGGACCGGCTCCGACGA GATTGTCCACAGCAGCGAGCAGGAGCAGCACGTCGTCTTCGAGAACGACCGCTGCGACGACCCGACCCACTCCAT GCTGTCCAAGGACCACTTCTCCAACGTAGGGTTTTCTTTTCTCATTTTTCTCTTTTTTCCCCCCTCGTTCTGCGG ACGGCCCCCGGGAGCATCGGGCGGCCCCGGCCGACAAGATCAATGGGCTTGACTGACGGGCGGCGTCGCAGATCC TGAACGAGGTCGCCGGGCGCACGGCGGCCAAGATGCTGCACTGGGTCGTCCCCCAGCTCATGGACGCCATCGACG ACGACAGCACCGACGTCAACCGGCTGCTGACGCGCATCATCTACGGCGTCATGCACCACCCCGCCCAGCGGGAGA TGGGGCAGGACGGCGTCCGCGAGGCGCGCCAGCTGATCTTCGAGTCGGTCCAGGAGTGGTGGAGCGAGATGGGCG AGGAGCAGCGCGAGGACTACCGCCGGAAGCTGTCGCGCGAGGGCGTCCAGGCGGGCGAGAACCACAAGGAGGGCG TCCAGGACACGGGCCACGGCCACGGGTGCGCCGGCAAGCTCAAGATGCGCAAGCTGTACGGCCAGCCGGAGACGC TCGAGACCAAGATCGCGGGCGCGGCGGCCGACGCCATCTTCCAGGGCGCCACGGGCGCCATCTCGGGCATGGTGG AGCAGAACACGGGCGTGAAGCTGCCGTCGACGCACGCCGCCTCGCAGCAGCCGGAGGAGCAGCCGGAGGAGTCGG GCGGCTTCGGCGGCTTCATCAGCTCCATCCTCGGCGGCTTCGGCAAGAACGAGACGGAGAAGCAGACGAGCCAGC GGCGCAACGACGACGGCTCGTACACGCAGACGCAGACCGAGTACGGCCACGACGGCGGCCGGTACGGCCAGGCCC AGTACAGCCAGACGCAGCACCCGGACGGCAGCAGCGAGTCCCGGTACAGCCGCTACGAGCAGCAGGAGTCGCAGC ACGGCGGGCGGCAGACGGAGGGGTACGGCTACGAGGAGAGGACGGAGACGCGGCCGACGTACGGCGGCGGCTACG AGCAGCGCACCGAGCGGCGCGAGTACAGCGGCTCCAACGAGGAAAGCTACGGCGGCGGCTACCAGCGCCGGGACG AGGACAGCTACGGCGGCGGCGGCGGCGGCGGGCGGCACGAGGGCCGCAGCGGGTACGGCGGCGGCGGCGGCAGCT ATGAACGCCGGGACGAGGACAGTTACGGCAGTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTACGGCCGTC GGGACCGGGACGAGGACAGCTACGGCGGCGGCAGCGGCAGCCAGTCCCGTCGGGACGAGGACAGCAGCTACAGTG GCGGCAGCAGCAGCTACGGCCGGCACGAGCAGCGATCCCGGCGGGAGGAAGAGAGCTACGGTGGCGGCGGCGGCG GCGGCGGCTACGGGCGGCAGGAGCAGAGATCCCGCCGGGACGAAGACAGCTCCAGCAGTAGCCGAGGACGCCGCA CCGAGGGCAGCTACGACGATGACGACGACAACGAGCGCCGTGGCGGATCCGGCGGCGGCGCGGGCGGTTACGGAC GCAGCGAGCGAAGCGGATACGGGGCCGACTATGAGCGAGACAACGACAACGACGACGACGACGAGTACGGACGGG AGAACAGGCGGCGGGGCCAGGGCGGCTACGGCTACTAG |