Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7299
Gene name
LocationContig_416:2869..4303
Strand-
Gene length (bp)1434
Transcript length (bp)1434
Coding sequence length (bp)1434
Protein length (aa) 478

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 42 64 22
3 76 98 22
4 118 140 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7299
MASAIWLVLSGTLAVLATSTALCLQIIAAVNIDDSPLRAATAAAASLQSVLLVILWWLAAASLFQTGKLPSTRRL
GLAFGLELLACGLAAAVSAVSLARLANPAADAPRAVVDFQAQLLTGTSVAVALAAVLQLAYLILHFVSSRRSALR
QAGASGEMPSDGRRSRSSRVKSVPYSQTRTSGGDATQEMTSIQRPPPSATASTASDRASFFKSPFSQAIRPSSSK
TKLLPAGRESIRRPLSLDSIPPRSSMEDSSFDSWDTSSVDAHNRQVVLEMSSPSIKPRGLETIPASPSDSRSPSP
RTPLELEPPRSVRTSHSYNTLRQMDEARLTGSSSVNELHIHPLFRSDSELPPPVASPNTIVLASPIAGQVLSRRE
SMQSLARMRSGSLPAARASPLAHQASLEGTKLKMQSDPQLVDERNETDEEEEPEEEQEQAQGRPRGPAAKAERRM
TPPVPAWLLSPGLPPANDSLTDVRRAA*
Coding >Hirsu2|7299
ATGGCGAGCGCCATCTGGCTAGTCCTCAGCGGCACCCTGGCCGTCCTCGCCACCTCCACCGCCCTGTGCCTGCAG
ATCATCGCCGCCGTCAACATCGACGACTCGCCGCTGAGGGCCGCCACCGCCGCCGCCGCCTCGCTGCAGTCCGTC
CTTCTCGTCATCCTGTGGTGGCTTGCCGCCGCCAGCCTCTTCCAAACCGGCAAGCTGCCCTCGACACGACGCCTC
GGCCTCGCCTTCGGCCTCGAGCTCCTGGCCTGCGGGCTCGCCGCCGCCGTCTCGGCCGTCTCCCTGGCACGCCTG
GCCAACCCTGCCGCCGACGCCCCGCGTGCCGTCGTCGACTTTCAGGCCCAGCTGCTCACGGGGACCTCGGTGGCC
GTGGCACTCGCGGCCGTCCTCCAGCTCGCCTACCTCATCCTCCACTTCGTCTCCTCCCGAAGGTCTGCTCTCCGC
CAGGCGGGTGCCTCGGGCGAGATGCCGTCAGACGGCCGGAGGAGCCGGAGCTCCCGGGTCAAGTCGGTGCCGTAC
AGCCAGACGAGGACCAGCGGCGGCGACGCGACGCAGGAGATGACGTCGATCCAACGTCCCCCGCCCTCGGCCACG
GCCTCGACCGCGTCGGACAGGGCAAGCTTCTTCAAGTCGCCCTTCTCCCAGGCCATCCGCCCCAGCTCGTCCAAG
ACGAAGCTGCTGCCGGCCGGCCGAGAATCGATCCGGCGGCCGCTCTCGCTCGACTCGATCCCGCCCAGGAGCAGC
ATGGAGGACTCGTCCTTTGACTCGTGGGACACGTCCTCGGTCGACGCCCACAACCGGCAGGTCGTCCTCGAGATG
TCCTCGCCCTCCATCAAGCCGCGCGGGCTCGAGACCATCCCGGCCAGCCCCTCCGACAGCCGCAGCCCGAGCCCG
AGGACGCCGCTGGAGCTGGAGCCCCCCCGCTCCGTCCGGACCAGCCACAGCTACAACACGCTGAGGCAGATGGAC
GAGGCCCGCCTGACGGGGTCGAGCTCCGTCAACGAGCTGCACATCCACCCCCTGTTCCGGTCCGACTCGGAGCTC
CCGCCGCCCGTCGCCTCGCCCAACACCATAGTCCTTGCCTCGCCCATCGCGGGGCAGGTCCTCTCGCGCCGCGAG
AGCATGCAGTCGCTGGCCCGCATGCGAAGCGGAAGCCTGCCAGCCGCCCGCGCCTCCCCCCTGGCCCACCAGGCG
AGCCTGGAAGGCACCAAGCTCAAGATGCAGAGCGACCCTCAGCTGGTGGACGAGAGGAACGAGACCGACGAGGAG
GAGGAGCCGGAGGAGGAGCAGGAGCAGGCCCAGGGCCGGCCGCGGGGGCCGGCCGCGAAGGCCGAACGGAGGATG
ACGCCGCCGGTGCCGGCCTGGCTGCTGAGCCCCGGCCTGCCGCCGGCAAACGACAGCCTGACCGATGTTAGGAGA
GCGGCGTGA
Transcript >Hirsu2|7299
ATGGCGAGCGCCATCTGGCTAGTCCTCAGCGGCACCCTGGCCGTCCTCGCCACCTCCACCGCCCTGTGCCTGCAG
ATCATCGCCGCCGTCAACATCGACGACTCGCCGCTGAGGGCCGCCACCGCCGCCGCCGCCTCGCTGCAGTCCGTC
CTTCTCGTCATCCTGTGGTGGCTTGCCGCCGCCAGCCTCTTCCAAACCGGCAAGCTGCCCTCGACACGACGCCTC
GGCCTCGCCTTCGGCCTCGAGCTCCTGGCCTGCGGGCTCGCCGCCGCCGTCTCGGCCGTCTCCCTGGCACGCCTG
GCCAACCCTGCCGCCGACGCCCCGCGTGCCGTCGTCGACTTTCAGGCCCAGCTGCTCACGGGGACCTCGGTGGCC
GTGGCACTCGCGGCCGTCCTCCAGCTCGCCTACCTCATCCTCCACTTCGTCTCCTCCCGAAGGTCTGCTCTCCGC
CAGGCGGGTGCCTCGGGCGAGATGCCGTCAGACGGCCGGAGGAGCCGGAGCTCCCGGGTCAAGTCGGTGCCGTAC
AGCCAGACGAGGACCAGCGGCGGCGACGCGACGCAGGAGATGACGTCGATCCAACGTCCCCCGCCCTCGGCCACG
GCCTCGACCGCGTCGGACAGGGCAAGCTTCTTCAAGTCGCCCTTCTCCCAGGCCATCCGCCCCAGCTCGTCCAAG
ACGAAGCTGCTGCCGGCCGGCCGAGAATCGATCCGGCGGCCGCTCTCGCTCGACTCGATCCCGCCCAGGAGCAGC
ATGGAGGACTCGTCCTTTGACTCGTGGGACACGTCCTCGGTCGACGCCCACAACCGGCAGGTCGTCCTCGAGATG
TCCTCGCCCTCCATCAAGCCGCGCGGGCTCGAGACCATCCCGGCCAGCCCCTCCGACAGCCGCAGCCCGAGCCCG
AGGACGCCGCTGGAGCTGGAGCCCCCCCGCTCCGTCCGGACCAGCCACAGCTACAACACGCTGAGGCAGATGGAC
GAGGCCCGCCTGACGGGGTCGAGCTCCGTCAACGAGCTGCACATCCACCCCCTGTTCCGGTCCGACTCGGAGCTC
CCGCCGCCCGTCGCCTCGCCCAACACCATAGTCCTTGCCTCGCCCATCGCGGGGCAGGTCCTCTCGCGCCGCGAG
AGCATGCAGTCGCTGGCCCGCATGCGAAGCGGAAGCCTGCCAGCCGCCCGCGCCTCCCCCCTGGCCCACCAGGCG
AGCCTGGAAGGCACCAAGCTCAAGATGCAGAGCGACCCTCAGCTGGTGGACGAGAGGAACGAGACCGACGAGGAG
GAGGAGCCGGAGGAGGAGCAGGAGCAGGCCCAGGGCCGGCCGCGGGGGCCGGCCGCGAAGGCCGAACGGAGGATG
ACGCCGCCGGTGCCGGCCTGGCTGCTGAGCCCCGGCCTGCCGCCGGCAAACGACAGCCTGACCGATGTTAGGAGA
GCGGCGTGA
Gene >Hirsu2|7299
ATGGCGAGCGCCATCTGGCTAGTCCTCAGCGGCACCCTGGCCGTCCTCGCCACCTCCACCGCCCTGTGCCTGCAG
ATCATCGCCGCCGTCAACATCGACGACTCGCCGCTGAGGGCCGCCACCGCCGCCGCCGCCTCGCTGCAGTCCGTC
CTTCTCGTCATCCTGTGGTGGCTTGCCGCCGCCAGCCTCTTCCAAACCGGCAAGCTGCCCTCGACACGACGCCTC
GGCCTCGCCTTCGGCCTCGAGCTCCTGGCCTGCGGGCTCGCCGCCGCCGTCTCGGCCGTCTCCCTGGCACGCCTG
GCCAACCCTGCCGCCGACGCCCCGCGTGCCGTCGTCGACTTTCAGGCCCAGCTGCTCACGGGGACCTCGGTGGCC
GTGGCACTCGCGGCCGTCCTCCAGCTCGCCTACCTCATCCTCCACTTCGTCTCCTCCCGAAGGTCTGCTCTCCGC
CAGGCGGGTGCCTCGGGCGAGATGCCGTCAGACGGCCGGAGGAGCCGGAGCTCCCGGGTCAAGTCGGTGCCGTAC
AGCCAGACGAGGACCAGCGGCGGCGACGCGACGCAGGAGATGACGTCGATCCAACGTCCCCCGCCCTCGGCCACG
GCCTCGACCGCGTCGGACAGGGCAAGCTTCTTCAAGTCGCCCTTCTCCCAGGCCATCCGCCCCAGCTCGTCCAAG
ACGAAGCTGCTGCCGGCCGGCCGAGAATCGATCCGGCGGCCGCTCTCGCTCGACTCGATCCCGCCCAGGAGCAGC
ATGGAGGACTCGTCCTTTGACTCGTGGGACACGTCCTCGGTCGACGCCCACAACCGGCAGGTCGTCCTCGAGATG
TCCTCGCCCTCCATCAAGCCGCGCGGGCTCGAGACCATCCCGGCCAGCCCCTCCGACAGCCGCAGCCCGAGCCCG
AGGACGCCGCTGGAGCTGGAGCCCCCCCGCTCCGTCCGGACCAGCCACAGCTACAACACGCTGAGGCAGATGGAC
GAGGCCCGCCTGACGGGGTCGAGCTCCGTCAACGAGCTGCACATCCACCCCCTGTTCCGGTCCGACTCGGAGCTC
CCGCCGCCCGTCGCCTCGCCCAACACCATAGTCCTTGCCTCGCCCATCGCGGGGCAGGTCCTCTCGCGCCGCGAG
AGCATGCAGTCGCTGGCCCGCATGCGAAGCGGAAGCCTGCCAGCCGCCCGCGCCTCCCCCCTGGCCCACCAGGCG
AGCCTGGAAGGCACCAAGCTCAAGATGCAGAGCGACCCTCAGCTGGTGGACGAGAGGAACGAGACCGACGAGGAG
GAGGAGCCGGAGGAGGAGCAGGAGCAGGCCCAGGGCCGGCCGCGGGGGCCGGCCGCGAAGGCCGAACGGAGGATG
ACGCCGCCGGTGCCGGCCTGGCTGCTGAGCCCCGGCCTGCCGCCGGCAAACGACAGCCTGACCGATGTTAGGAGA
GCGGCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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