© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|726 |
| Gene name | |
| Location | Contig_1149:6797..7624 |
| Strand | + |
| Gene length (bp) | 827 |
| Transcript length (bp) | 639 |
| Coding sequence length (bp) | 639 |
| Protein length (aa) | 213 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05529 | Bap31 | Bap31/Bap29 transmembrane region | 3.9E-50 | 1 | 141 |
| PF18035 | Bap31_Bap29_C | Bap31/Bap29 cytoplasmic coiled-coil domain | 7.0E-12 | 163 | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14290|YF14_SCHPO | Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 | 1 | 210 | 9.0E-35 |
| sp|Q07451|YET3_YEAST | Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 | 1 | 190 | 3.0E-30 |
| sp|P35723|YET1_YEAST | Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 | 15 | 194 | 6.0E-15 |
| sp|Q04210|YET2_YEAST | Endoplasmic reticulum transmembrane protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET2 PE=1 SV=1 | 1 | 184 | 5.0E-11 |
| sp|Q61334|BAP29_MOUSE | B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29 PE=1 SV=1 | 1 | 212 | 6.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14290|YF14_SCHPO | Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 | 1 | 210 | 9.0E-35 |
| sp|Q07451|YET3_YEAST | Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 | 1 | 190 | 3.0E-30 |
| sp|P35723|YET1_YEAST | Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 | 15 | 194 | 6.0E-15 |
| sp|Q04210|YET2_YEAST | Endoplasmic reticulum transmembrane protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET2 PE=1 SV=1 | 1 | 184 | 5.0E-11 |
| sp|Q61334|BAP29_MOUSE | B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29 PE=1 SV=1 | 1 | 212 | 6.0E-11 |
| sp|Q5R9U7|BAP29_PONAB | B-cell receptor-associated protein 29 OS=Pongo abelii GN=BCAP29 PE=2 SV=1 | 1 | 212 | 2.0E-10 |
| sp|Q9UHQ4|BAP29_HUMAN | B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29 PE=1 SV=2 | 1 | 212 | 5.0E-10 |
| sp|Q32KL9|BAP29_BOVIN | B-cell receptor-associated protein 29 OS=Bos taurus GN=BCAP29 PE=2 SV=1 | 1 | 203 | 2.0E-08 |
| sp|Q54K74|YETL_DICDI | Endoplasmic reticulum transmembrane protein YET-like OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2 | 1 | 204 | 2.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 44 | 63 | 19 |
| 3 | 108 | 130 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|726 MTLYYSLVFVLLMFEMGLFMLLIVPFPFTVKRKIFTFISENPVVAKIQYWMKITFVFILILFVDSVNRVYRVQLE LLAATEQTSKGAATVMGHERLEVQARKFYSQRNMYLCGFTLFLSLILNRTYVMILEVMRLEDRVRSYEGTKKDTK ESEKLAVAGKPGELAALKKELERKEQDLQTLKKQSQQLHKSYDELCDKYAASQKNLESSKSK* |
| Coding | >Hirsu2|726 ATGACGCTCTACTACAGCCTCGTTTTCGTCCTCCTCATGTTCGAGATGGGCTTGTTCATGCTCTTGATCGTGCCG TTCCCTTTCACCGTCAAGCGCAAGATCTTTACCTTCATCTCGGAAAACCCGGTTGTGGCCAAGATCCAGTACTGG ATGAAAATCACCTTCGTCTTCATCCTCATCCTCTTTGTCGACAGCGTCAATCGCGTGTACCGCGTCCAGCTCGAG CTGCTGGCGGCCACGGAGCAGACGTCTAAGGGAGCTGCGACCGTCATGGGCCACGAACGGCTCGAGGTGCAGGCC CGCAAGTTCTACTCGCAGCGCAACATGTACCTCTGCGGCTTCACCCTGTTCCTGTCGCTCATCCTGAACCGCACC TATGTCATGATCCTCGAGGTGATGCGGCTCGAGGACCGGGTCCGGTCGTACGAGGGCACCAAGAAGGACACCAAG GAGAGCGAGAAGCTGGCGGTGGCCGGCAAGCCCGGCGAGCTGGCCGCGCTGAAGAAGGAGCTGGAGCGCAAGGAG CAGGACCTGCAGACGCTGAAGAAGCAGAGCCAGCAGCTCCACAAGAGCTACGACGAGCTGTGCGATAAGTACGCC GCCTCGCAGAAGAACTTGGAGTCGAGCAAGTCCAAGTGA |
| Transcript | >Hirsu2|726 ATGACGCTCTACTACAGCCTCGTTTTCGTCCTCCTCATGTTCGAGATGGGCTTGTTCATGCTCTTGATCGTGCCG TTCCCTTTCACCGTCAAGCGCAAGATCTTTACCTTCATCTCGGAAAACCCGGTTGTGGCCAAGATCCAGTACTGG ATGAAAATCACCTTCGTCTTCATCCTCATCCTCTTTGTCGACAGCGTCAATCGCGTGTACCGCGTCCAGCTCGAG CTGCTGGCGGCCACGGAGCAGACGTCTAAGGGAGCTGCGACCGTCATGGGCCACGAACGGCTCGAGGTGCAGGCC CGCAAGTTCTACTCGCAGCGCAACATGTACCTCTGCGGCTTCACCCTGTTCCTGTCGCTCATCCTGAACCGCACC TATGTCATGATCCTCGAGGTGATGCGGCTCGAGGACCGGGTCCGGTCGTACGAGGGCACCAAGAAGGACACCAAG GAGAGCGAGAAGCTGGCGGTGGCCGGCAAGCCCGGCGAGCTGGCCGCGCTGAAGAAGGAGCTGGAGCGCAAGGAG CAGGACCTGCAGACGCTGAAGAAGCAGAGCCAGCAGCTCCACAAGAGCTACGACGAGCTGTGCGATAAGTACGCC GCCTCGCAGAAGAACTTGGAGTCGAGCAAGTCCAAGTGA |
| Gene | >Hirsu2|726 ATGACGCTCTACTACAGCCTCGTGCGTCTGTCCTCGGGGGATGGGCGCCGAGTCCATGTCGTCTGCTGACTGCCG CCAGGTTTTCGTCCTCCTCATGTTCGAGATGGGCTTGTTCATGCTCTTGATCGTGCCGTTCCCTTTCACCGTCAA GCGCAAGATCTTTACGTACGTTCGCCTTGCCCCCGCCCGCGCGCGACGCGGCCGACACGCTTGCGCCGCGACGCT GACGACGTGGCAGCTTCATCTCGGAAAACCCGGTTGTGGCCAAGATCCAGTACTGGATGAAAATCACCTTCGTCT TCATCCTCATCCTCTTTGTCGACAGCGTCAATCGCGTGTACCGCGTCCAGCTCGAGCTGCTGGCGGCCACGGAGC AGACGTCTAAGGGAGCGTAGGTCCAGGCCCGTTGCATGCGTTGACCTCCAGGATGCTGACGGCGCCTCGACAGTG CGACCGTCATGGGCCACGAACGGCTCGAGGTGCAGGCCCGCAAGTTCTACTCGCAGCGCAACATGTACCTCTGCG GCTTCACCCTGTTCCTGTCGCTCATCCTGAACCGCACCTATGTCATGATCCTCGAGGTGATGCGGCTCGAGGACC GGGTCCGGTCGTACGAGGGCACCAAGAAGGACACCAAGGAGAGCGAGAAGCTGGCGGTGGCCGGCAAGCCCGGCG AGCTGGCCGCGCTGAAGAAGGAGCTGGAGCGCAAGGAGCAGGACCTGCAGACGCTGAAGAAGCAGAGCCAGCAGC TCCACAAGAGCTACGACGAGCTGTGCGATAAGTACGCCGCCTCGCAGAAGAACTTGGAGTCGAGCAAGTCCAAGT GA |