© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|7257 |
| Gene name | |
| Location | Contig_410:10441..11476 |
| Strand | + |
| Gene length (bp) | 1035 |
| Transcript length (bp) | 1035 |
| Coding sequence length (bp) | 1035 |
| Protein length (aa) | 345 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1005 | 0.0399 | 0.9652 | 0.0698 | 0.0977 | 0.0156 | 0.0789 | 0.0905 | 0.0864 | 0.0011 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.9997 |
| Orthofinder run ID | 4 |
| Orthogroup | 10326 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|7257 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7257 MKATAVILASLLGGALAAPPRGNPQQKGVDKTPPPNDSDKDVCFAAYQKLKEQCLESAQRDEPAAERCEQEGQEA RKQCLDVQVKDGKVVAGDEVRKEENEARRKEICSAAYQKLMDACLAKPQDDTEPATERLERCRRDNEKARSQCLD VQVKDEEVVTGDEARQKDEEARQKDEEARRKDEEARREGKENREKEAKCAVEGNRARAECMKGRFTSKANTGKTR ENCDEEKKKKVEACMRVGPIDQYCDDMAAASNKLYDKNFCLKAFRLCGDPTSLKDEEAKKCADQKMADKKAGTAD QQDSTPIDNEAVSDQVASAQGAGGGCKAIVAQAEECKRTNGVLR* |
| Coding | >Hirsu2|7257 ATGAAGGCCACTGCTGTCATCCTGGCCTCTCTGCTGGGAGGAGCACTCGCGGCCCCGCCCCGCGGCAACCCCCAG CAAAAGGGCGTTGACAAGACGCCGCCGCCAAACGACAGCGACAAGGACGTCTGCTTCGCCGCCTACCAAAAGCTG AAGGAACAGTGTTTGGAATCTGCCCAGCGCGACGAGCCGGCCGCCGAGCGATGCGAACAGGAGGGCCAAGAGGCC CGCAAGCAGTGCCTGGACGTCCAGGTTAAGGACGGAAAAGTCGTCGCCGGAGATGAGGTTCGCAAGGAGGAAAAC GAGGCCCGCCGGAAGGAAATCTGCTCCGCCGCCTACCAAAAGCTGATGGACGCGTGTTTGGCAAAACCCCAGGAC GACACGGAGCCGGCCACCGAGCGCCTCGAACGATGCCGCCGGGACAACGAAAAGGCCCGCAGCCAGTGCCTGGAC GTCCAGGTTAAGGACGAAGAAGTCGTCACCGGAGACGAGGCCCGTCAGAAGGACGAGGAGGCCCGTCAGAAGGAC GAGGAGGCCCGCCGCAAGGACGAGGAGGCCCGCCGCGAGGGCAAGGAGAACCGCGAGAAGGAGGCCAAGTGTGCC GTTGAGGGCAACCGTGCCCGTGCCGAGTGTATGAAGGGCCGCTTTACCTCCAAGGCGAACACGGGCAAGACGAGG GAGAACTGCGATGAGGAGAAGAAGAAGAAGGTCGAGGCGTGCATGCGCGTCGGCCCGATCGATCAATACTGCGAC GACATGGCGGCTGCCAGCAACAAATTGTACGACAAAAACTTCTGCCTTAAGGCCTTTAGACTATGCGGTGACCCG ACCTCTCTGAAGGACGAGGAGGCTAAGAAGTGCGCGGACCAGAAGATGGCGGATAAAAAAGCCGGCACTGCAGAC CAGCAAGACTCCACGCCTATCGACAACGAGGCCGTGTCCGACCAAGTTGCGTCCGCCCAAGGCGCCGGCGGGGGC TGCAAGGCCATTGTAGCCCAGGCCGAGGAATGCAAGAGGACGAATGGTGTACTGCGGTAG |
| Transcript | >Hirsu2|7257 ATGAAGGCCACTGCTGTCATCCTGGCCTCTCTGCTGGGAGGAGCACTCGCGGCCCCGCCCCGCGGCAACCCCCAG CAAAAGGGCGTTGACAAGACGCCGCCGCCAAACGACAGCGACAAGGACGTCTGCTTCGCCGCCTACCAAAAGCTG AAGGAACAGTGTTTGGAATCTGCCCAGCGCGACGAGCCGGCCGCCGAGCGATGCGAACAGGAGGGCCAAGAGGCC CGCAAGCAGTGCCTGGACGTCCAGGTTAAGGACGGAAAAGTCGTCGCCGGAGATGAGGTTCGCAAGGAGGAAAAC GAGGCCCGCCGGAAGGAAATCTGCTCCGCCGCCTACCAAAAGCTGATGGACGCGTGTTTGGCAAAACCCCAGGAC GACACGGAGCCGGCCACCGAGCGCCTCGAACGATGCCGCCGGGACAACGAAAAGGCCCGCAGCCAGTGCCTGGAC GTCCAGGTTAAGGACGAAGAAGTCGTCACCGGAGACGAGGCCCGTCAGAAGGACGAGGAGGCCCGTCAGAAGGAC GAGGAGGCCCGCCGCAAGGACGAGGAGGCCCGCCGCGAGGGCAAGGAGAACCGCGAGAAGGAGGCCAAGTGTGCC GTTGAGGGCAACCGTGCCCGTGCCGAGTGTATGAAGGGCCGCTTTACCTCCAAGGCGAACACGGGCAAGACGAGG GAGAACTGCGATGAGGAGAAGAAGAAGAAGGTCGAGGCGTGCATGCGCGTCGGCCCGATCGATCAATACTGCGAC GACATGGCGGCTGCCAGCAACAAATTGTACGACAAAAACTTCTGCCTTAAGGCCTTTAGACTATGCGGTGACCCG ACCTCTCTGAAGGACGAGGAGGCTAAGAAGTGCGCGGACCAGAAGATGGCGGATAAAAAAGCCGGCACTGCAGAC CAGCAAGACTCCACGCCTATCGACAACGAGGCCGTGTCCGACCAAGTTGCGTCCGCCCAAGGCGCCGGCGGGGGC TGCAAGGCCATTGTAGCCCAGGCCGAGGAATGCAAGAGGACGAATGGTGTACTGCGGTAG |
| Gene | >Hirsu2|7257 ATGAAGGCCACTGCTGTCATCCTGGCCTCTCTGCTGGGAGGAGCACTCGCGGCCCCGCCCCGCGGCAACCCCCAG CAAAAGGGCGTTGACAAGACGCCGCCGCCAAACGACAGCGACAAGGACGTCTGCTTCGCCGCCTACCAAAAGCTG AAGGAACAGTGTTTGGAATCTGCCCAGCGCGACGAGCCGGCCGCCGAGCGATGCGAACAGGAGGGCCAAGAGGCC CGCAAGCAGTGCCTGGACGTCCAGGTTAAGGACGGAAAAGTCGTCGCCGGAGATGAGGTTCGCAAGGAGGAAAAC GAGGCCCGCCGGAAGGAAATCTGCTCCGCCGCCTACCAAAAGCTGATGGACGCGTGTTTGGCAAAACCCCAGGAC GACACGGAGCCGGCCACCGAGCGCCTCGAACGATGCCGCCGGGACAACGAAAAGGCCCGCAGCCAGTGCCTGGAC GTCCAGGTTAAGGACGAAGAAGTCGTCACCGGAGACGAGGCCCGTCAGAAGGACGAGGAGGCCCGTCAGAAGGAC GAGGAGGCCCGCCGCAAGGACGAGGAGGCCCGCCGCGAGGGCAAGGAGAACCGCGAGAAGGAGGCCAAGTGTGCC GTTGAGGGCAACCGTGCCCGTGCCGAGTGTATGAAGGGCCGCTTTACCTCCAAGGCGAACACGGGCAAGACGAGG GAGAACTGCGATGAGGAGAAGAAGAAGAAGGTCGAGGCGTGCATGCGCGTCGGCCCGATCGATCAATACTGCGAC GACATGGCGGCTGCCAGCAACAAATTGTACGACAAAAACTTCTGCCTTAAGGCCTTTAGACTATGCGGTGACCCG ACCTCTCTGAAGGACGAGGAGGCTAAGAAGTGCGCGGACCAGAAGATGGCGGATAAAAAAGCCGGCACTGCAGAC CAGCAAGACTCCACGCCTATCGACAACGAGGCCGTGTCCGACCAAGTTGCGTCCGCCCAAGGCGCCGGCGGGGGC TGCAAGGCCATTGTAGCCCAGGCCGAGGAATGCAAGAGGACGAATGGTGTACTGCGGTAG |