© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7245 |
| Gene name | |
| Location | Contig_41:37075..37991 |
| Strand | - |
| Gene length (bp) | 916 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13578 | Methyltransf_24 | Methyltransferase domain | 1.9E-06 | 111 | 207 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9AJU2|ELMM1_STROV | 8-demethyl-8-alpha-L-rhamnosyl tetracenomycin-C 2'-O-methyltransferase OS=Streptomyces olivaceus GN=elmMI PE=1 SV=1 | 61 | 272 | 9.0E-27 |
| sp|Q9AJU1|ELMM2_STROV | 8-demethyl-8-(2-methoxy-alpha-L-rhamnosyl)-tetracenomycin-C 3'-O-methyltransferase OS=Streptomyces olivaceus GN=elmMII PE=1 SV=1 | 49 | 249 | 7.0E-23 |
| sp|O87833|OLEY_STRAT | L-olivosyl-oleandolide 3-O-methyltransferase OS=Streptomyces antibioticus GN=oleY PE=1 SV=1 | 58 | 241 | 3.0E-22 |
| sp|Q9ZHQ4|TYLE_STRFR | Demethylmacrocin O-methyltransferase OS=Streptomyces fradiae GN=tylE PE=1 SV=1 | 41 | 241 | 3.0E-21 |
| sp|Q83WF2|MYCE_MICGR | Mycinamicin VI 2''-O-methyltransferase OS=Micromonospora griseorubida GN=mycE PE=1 SV=1 | 73 | 239 | 1.0E-19 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 17 | 39 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7245 MASPSHPTKPARMKQNCFLFYLSCLAAGLFVVALFRHLGQDTAFLLQSKPVTYLNGSFEQVALKYGTDKVTTHNY QLMYEKYMSPFRNLPIKMLEIGLGCNMVLITDYGPGASYHTWLEYLSHVNLYFIEYDARCANKYRDKAVNAQVYV GDQADVAFLEQVVADTTTEGLFDIIIDDGGHTMEQQTTSLEHLWPVVKPGGLYVIEDLQTSYWPDYGGDPSTRNP AKHTTMKYLYELLDDMMIKRDSKPVSHDLLSVECMAEICALRKRYES* |
| Coding | >Hirsu2|7245 ATGGCCAGTCCGTCTCATCCCACCAAGCCCGCCAGGATGAAGCAGAACTGTTTCCTGTTCTATCTCTCGTGTCTA GCGGCCGGTCTATTTGTTGTTGCCCTCTTCCGTCACCTGGGCCAAGACACGGCGTTTCTGCTGCAAAGCAAGCCG GTCACCTATCTCAACGGATCATTCGAGCAGGTCGCTCTCAAGTATGGCACCGACAAGGTTACCACCCATAACTAC CAATTGATGTACGAAAAGTACATGTCGCCCTTTCGAAACCTTCCAATCAAGATGCTTGAGATCGGGCTCGGTTGC AACATGGTATTGATCACTGACTACGGACCCGGAGCATCATACCATACCTGGCTCGAATACTTGTCCCATGTTAAC TTGTACTTCATCGAATATGATGCGCGCTGTGCCAACAAGTATCGAGACAAAGCCGTCAACGCCCAAGTCTACGTC GGTGATCAGGCGGACGTGGCCTTTCTCGAGCAAGTTGTAGCCGACACGACGACAGAAGGCCTATTTGACATCATA ATTGACGATGGCGGACACACCATGGAGCAGCAGACCACGTCTCTGGAGCACCTATGGCCGGTAGTCAAGCCAGGA GGGTTATACGTGATCGAGGATCTTCAAACGAGCTACTGGCCGGACTATGGTGGTGACCCGTCGACGAGAAATCCA GCAAAACACACAACGATGAAGTACCTGTACGAGTTATTGGACGATATGATGATCAAGCGGGATTCGAAGCCGGTC AGCCACGACTTGCTCTCAGTGGAGTGCATGGCGGAAATTTGCGCGTTGCGAAAGAGATATGAGAGTTGA |
| Transcript | >Hirsu2|7245 ATGGCCAGTCCGTCTCATCCCACCAAGCCCGCCAGGATGAAGCAGAACTGTTTCCTGTTCTATCTCTCGTGTCTA GCGGCCGGTCTATTTGTTGTTGCCCTCTTCCGTCACCTGGGCCAAGACACGGCGTTTCTGCTGCAAAGCAAGCCG GTCACCTATCTCAACGGATCATTCGAGCAGGTCGCTCTCAAGTATGGCACCGACAAGGTTACCACCCATAACTAC CAATTGATGTACGAAAAGTACATGTCGCCCTTTCGAAACCTTCCAATCAAGATGCTTGAGATCGGGCTCGGTTGC AACATGGTATTGATCACTGACTACGGACCCGGAGCATCATACCATACCTGGCTCGAATACTTGTCCCATGTTAAC TTGTACTTCATCGAATATGATGCGCGCTGTGCCAACAAGTATCGAGACAAAGCCGTCAACGCCCAAGTCTACGTC GGTGATCAGGCGGACGTGGCCTTTCTCGAGCAAGTTGTAGCCGACACGACGACAGAAGGCCTATTTGACATCATA ATTGACGATGGCGGACACACCATGGAGCAGCAGACCACGTCTCTGGAGCACCTATGGCCGGTAGTCAAGCCAGGA GGGTTATACGTGATCGAGGATCTTCAAACGAGCTACTGGCCGGACTATGGTGGTGACCCGTCGACGAGAAATCCA GCAAAACACACAACGATGAAGTACCTGTACGAGTTATTGGACGATATGATGATCAAGCGGGATTCGAAGCCGGTC AGCCACGACTTGCTCTCAGTGGAGTGCATGGCGGAAATTTGCGCGTTGCGAAAGAGATATGAGAGTTGA |
| Gene | >Hirsu2|7245 ATGGCCAGTCCGTCTCATCCCACCAAGCCCGCCAGGATGAAGCAGAACTGTTTCCTGTTCTATCTCTCGTGTCTA GCGGCCGGTCTATTTGTTGTTGCCCTCTTCCGTCACCTGGGCCAAGACACGGCGTTTCTGCTGCAAAGCAAGCCG GTCACCTATCTGTGAGCAAACAGAGCCGACGCATCCCATCGGCACTGACTGCCGCGCAGCAACGGATCATTCGAG CAGGTCGCTCTCAAGTATGGCACCGACAAGGTTACCACCCATAACTACCAATTGATGTACGAAAAGTACATGTCG CCCTTTCGAAACCTTCCAATCAAGATGCTTGAGATCGGGCTCGGTTGCAACATGGTATTGATCACTGTCAGTTGG TCTGTTGGATGGGAACCCTGCTTACGAACTACGACCATAGGACTACGGACCCGGAGCATCATACCATACCTGGCT CGAATACTTGTCCCATGTTAACTTGTACTTCATCGAATATGATGCGCGCTGTGCCAACAAGTATCGAGACAAAGC CGTCAACGCCCAAGTCTACGTCGGTGATCAGGCGGACGTGGCCTTTCTCGAGCAAGTTGTAGCCGACACGACGAC AGAAGGCCTATTTGACATCATAATTGACGATGGCGGACACACCATGGAGCAGCAGACCACGTCTCTGGAGCACCT ATGGCCGGTAGTCAAGCCAGGAGGGTTATACGTGATCGAGGATCTTCAAACGAGCTACTGGCCGGACTATGGTGG TGACCCGTCGACGAGAAATCCAGCAAAACACACAACGATGAAGTACCTGTACGAGTTATTGGACGATATGATGAT CAAGCGGGATTCGAAGCCGGTCAGCCACGACTTGCTCTCAGTGGAGTGCATGGCGGAAATTTGCGCGTTGCGAAA GAGATATGAGAGTTGA |