Protein ID | Hirsu2|7233 |
Gene name | |
Location | Contig_41:6422..8099 |
Strand | - |
Gene length (bp) | 1677 |
Transcript length (bp) | 1398 |
Coding sequence length (bp) | 1398 |
Protein length (aa) | 466 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 182 | 204 | 22 |
2 | 219 | 241 | 22 |
3 | 254 | 276 | 22 |
4 | 291 | 313 | 22 |
5 | 318 | 335 | 17 |
6 | 345 | 367 | 22 |
7 | 380 | 399 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7233 MARYKVVQFLALSCILSFNHVSRSLKRYSLTEQPHLSTCVVLFLAGCICFAASRKSKWIAFGDGRFTAGTHRPCD GPLSGAAEDEALLNGSTSHVPNRPRRFSLPALILCVVLRLELFHLVNYQQQCSSPGIEAFLCLVLIGYEIFSSRR RWGVPPTDDAEDPWRSVFDDLYDWFTGPRVTMVVMLTSACLFSLGTYLSISQITRSTYICFAPADSQSWTLTLQL LELVLDATIVILFWRILAWARTVRLRLRVLASVFVISSLVSSALWLGGIVFRGARQHDAGFGSLHGFDFLVDSVA LAIFTSSALFWICETSPITPVSVITFFVGTWSSILNVLRLGDWMHLSIAECLSPIWLIAFGTVLFLYTHDVRSVA FCERPFLTFLLMLILCVATIVSFLKRDEMSGERHPINDLMYQAQTEHHRWLLKAGTSQSLPVAVKVYEESHAGRM PPPNFSEWYQPTEKS* |
Coding | >Hirsu2|7233 ATGGCCCGATATAAGGTGGTGCAATTCTTGGCCTTGAGTTGCATCTTGTCCTTCAATCATGTGTCCCGCTCTCTG AAGCGGTATTCTTTGACCGAGCAGCCACACCTCTCGACCTGCGTGGTCCTATTTCTGGCCGGATGCATTTGCTTC GCTGCCAGTCGCAAGTCCAAGTGGATTGCTTTCGGTGATGGGCGGTTCACAGCTGGGACGCACCGGCCCTGCGAT GGACCGTTATCAGGCGCAGCAGAGGACGAGGCGCTATTGAACGGCTCAACCAGCCATGTCCCCAATCGCCCCAGG AGGTTCTCGCTGCCCGCCCTGATATTGTGCGTCGTGCTTCGGCTCGAGTTGTTTCATCTCGTCAATTATCAGCAG CAGTGTTCCAGCCCGGGTATAGAGGCCTTTCTCTGCCTGGTGCTCATCGGCTACGAGATCTTCTCTAGTCGACGG AGATGGGGGGTCCCGCCTACGGATGACGCCGAGGACCCGTGGCGTAGCGTTTTCGACGATCTCTACGACTGGTTC ACTGGGCCTCGGGTGACGATGGTCGTGATGCTCACGAGCGCGTGCCTCTTTTCTCTCGGTACCTACCTGTCCATC AGCCAGATCACGAGATCAACCTACATATGCTTTGCGCCTGCCGATAGCCAAAGTTGGACGCTTACGCTGCAGCTG CTCGAACTTGTTCTTGATGCCACGATTGTGATCCTATTCTGGCGGATCCTCGCATGGGCGAGGACTGTGAGGCTG CGACTGCGCGTCCTAGCAAGCGTCTTTGTCATCTCGTCGCTCGTCTCCTCGGCTCTGTGGCTGGGAGGCATCGTC TTCCGCGGCGCCCGCCAGCACGATGCCGGCTTTGGATCTCTTCACGGATTCGACTTTCTGGTGGACAGCGTCGCG CTTGCGATCTTCACCTCTTCTGCCCTGTTTTGGATCTGCGAGACATCCCCAATCACACCCGTTAGTGTCATCACG TTTTTTGTCGGAACCTGGAGCTCCATCTTGAATGTCCTTCGCCTCGGCGACTGGATGCATCTTTCGATTGCAGAA TGCCTTTCGCCGATCTGGCTCATTGCGTTCGGGACAGTCCTCTTCCTCTACACCCATGACGTCCGCTCCGTTGCC TTTTGCGAGCGCCCCTTCTTGACCTTCCTATTGATGTTGATTCTATGCGTGGCCACGATCGTTTCCTTCCTTAAG CGGGATGAGATGTCTGGCGAGCGCCATCCTATCAACGACCTCATGTATCAAGCTCAGACGGAGCACCATCGCTGG CTGCTGAAGGCCGGGACGAGCCAGAGCCTACCTGTCGCGGTCAAAGTGTACGAAGAAAGCCACGCTGGGAGGATG CCCCCGCCCAACTTCTCGGAGTGGTACCAACCTACGGAAAAGAGCTGA |
Transcript | >Hirsu2|7233 ATGGCCCGATATAAGGTGGTGCAATTCTTGGCCTTGAGTTGCATCTTGTCCTTCAATCATGTGTCCCGCTCTCTG AAGCGGTATTCTTTGACCGAGCAGCCACACCTCTCGACCTGCGTGGTCCTATTTCTGGCCGGATGCATTTGCTTC GCTGCCAGTCGCAAGTCCAAGTGGATTGCTTTCGGTGATGGGCGGTTCACAGCTGGGACGCACCGGCCCTGCGAT GGACCGTTATCAGGCGCAGCAGAGGACGAGGCGCTATTGAACGGCTCAACCAGCCATGTCCCCAATCGCCCCAGG AGGTTCTCGCTGCCCGCCCTGATATTGTGCGTCGTGCTTCGGCTCGAGTTGTTTCATCTCGTCAATTATCAGCAG CAGTGTTCCAGCCCGGGTATAGAGGCCTTTCTCTGCCTGGTGCTCATCGGCTACGAGATCTTCTCTAGTCGACGG AGATGGGGGGTCCCGCCTACGGATGACGCCGAGGACCCGTGGCGTAGCGTTTTCGACGATCTCTACGACTGGTTC ACTGGGCCTCGGGTGACGATGGTCGTGATGCTCACGAGCGCGTGCCTCTTTTCTCTCGGTACCTACCTGTCCATC AGCCAGATCACGAGATCAACCTACATATGCTTTGCGCCTGCCGATAGCCAAAGTTGGACGCTTACGCTGCAGCTG CTCGAACTTGTTCTTGATGCCACGATTGTGATCCTATTCTGGCGGATCCTCGCATGGGCGAGGACTGTGAGGCTG CGACTGCGCGTCCTAGCAAGCGTCTTTGTCATCTCGTCGCTCGTCTCCTCGGCTCTGTGGCTGGGAGGCATCGTC TTCCGCGGCGCCCGCCAGCACGATGCCGGCTTTGGATCTCTTCACGGATTCGACTTTCTGGTGGACAGCGTCGCG CTTGCGATCTTCACCTCTTCTGCCCTGTTTTGGATCTGCGAGACATCCCCAATCACACCCGTTAGTGTCATCACG TTTTTTGTCGGAACCTGGAGCTCCATCTTGAATGTCCTTCGCCTCGGCGACTGGATGCATCTTTCGATTGCAGAA TGCCTTTCGCCGATCTGGCTCATTGCGTTCGGGACAGTCCTCTTCCTCTACACCCATGACGTCCGCTCCGTTGCC TTTTGCGAGCGCCCCTTCTTGACCTTCCTATTGATGTTGATTCTATGCGTGGCCACGATCGTTTCCTTCCTTAAG CGGGATGAGATGTCTGGCGAGCGCCATCCTATCAACGACCTCATGTATCAAGCTCAGACGGAGCACCATCGCTGG CTGCTGAAGGCCGGGACGAGCCAGAGCCTACCTGTCGCGGTCAAAGTGTACGAAGAAAGCCACGCTGGGAGGATG CCCCCGCCCAACTTCTCGGAGTGGTACCAACCTACGGAAAAGAGCTGA |
Gene | >Hirsu2|7233 ATGGCCCGATATAAGGTGGTGCAATTCTTGGCCTTGAGGTGCGAACGCTCCCCCCCCCTCCCCTCTATCTGAGCT TCAAGTTTCTGGCCGATCCCATGCTCATGCTCGGTCAGTTGCATCTTGTCCTTCAATCATGTGTCCCGCTCTCTG AAGCGGTATTCTTTGACCGGTAAGGGCGGGCCGCAGTCCGTCAAATGACCCTCACACGCAGAAACGACGCTGACC AGCCCTGCAGAGCAGCCACACCTCTCGACCTGCGTGGTCCTATTTCTGGCCGGATGCATTTGCTTCGCTGCCAGT CGCAAGTCCAAGTGGATTGCTTTCGGTGATGGGCGGTTCACAGCTGGGACGCACCGGCCCTGCGATGGACCGTTA TCAGGCGCAGCAGAGGACGAGGCGCTATTGAACGGCTCAACCAGCCATGTCCCCAATCGCCCCAGGAGGTTCTCG CTGCCCGCCCTGATATTGTGCGTCGTGCTTCGGCTCGAGTTGTTTCATCTCGTCAATTATCAGCAGCAGTGTTCC AGCCCGGGTATAGAGGTGAGAGCACCTCTTCCGCGCCTCATCACTCTTCTGACTGACTCGGTGACGGCAGGCCTT TCTCTGCCTGGTGCTCATCGGCTACGAGATCTTCTCTAGTCGACGGAGATGGGGGGTCCCGCCTACGGATGACGC CGAGGACCCGTGGCGTAGCGTTTTCGACGATCTCTACGACTGGTTCACTGGGCCTCGGGTGACGATGGTCGTGAT GCTCACGAGCGCGTGCCTCTTTTCTCTCGGTACCTACCTGTCCATCAGCCAGATCACGAGATCAACCTACATATG CTTTGCGCCTGCCGATAGCCAAAGTTGGACGCTTACGCTGCAGCTGCTCGAACTTGTTCTTGATGCCACGATTGT GATCCTATTCTGGCGGATCCTCGCATGGGCGAGGACTGTGAGGCTGCGACTGCGCGTCCTAGCAAGCGTCTTTGT CATCTCGTCGCTCGTCTCCTCGGCTCTGTGGCTGGGAGGCATCGTCTTCCGCGGCGCCCGCCAGCACGATGCCGG CTTTGGATCTCTTCACGGATTCGACTTTCTGGTGGACAGCGTCGCGCTTGCGATCTTCACCTCTTCTGCCCTGTT TTGGATCTGCGAGACATCCCCAATCACACCCGTTAGTGTCATCACGTTTTTTGTCGGAACCTGGAGCTCCATCTT GAATGTCCTTCGCCTCGGCGACTGGATGCATCTTTCGATTGCAGAATGCCTTTCGCCGATCTGGCTCATTGCGTT CGGGACAGTCCTCTTCCTCTACACCCATGACGTCCGCTCCGTTGCCTTTTGCGAGCGCCCCTTCTTGACCTTCCT ATTGATGTTGATTCTATGCGTGGCCACGATCGTTTCCTTCCTTAAGCGGGATGAGATGTCTGGCGAGCGCCATCC TATCAACGACCTCATGTATCAAGCTCAGACGGAGCACCATCGCTGGCTGCTGAAGGCCGGGACGAGCCAGAGCCT ACCTGTCGCGGTCAAAGTGTACGAAGAAAGCCACGCTGGGAGGATGCCCCCGCCCAACTTCTCGGAGTGGTACCA GTACGCTTCAGCGTCTCTCGTGATTGATGAATTTCAACAAATCGACCAAGATCTGGCTCCCTTTGCAGGCATTGC GCCCGCAGACCTACGGAAAAGAGCTGA |