Protein ID | Hirsu2|7230 |
Gene name | |
Location | Contig_409:15525..16772 |
Strand | + |
Gene length (bp) | 1247 |
Transcript length (bp) | 1089 |
Coding sequence length (bp) | 1089 |
Protein length (aa) | 363 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Mitochondrial transit peptide | 0.3465 | 0.3297 | 0.2493 | 0.215 | 0.5277 | 0.0513 | 0.5378 | 0.2785 | 0.3784 | 0.1405 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 24 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 3712 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7230 MLLEFLSLLALSFIMAHLVPAALIRRLRDMERPESPEVVPAETSPAADDDRFHPTPIDIAVMRIMLVRSKRLPPD LVDSIFDHAEYWAHSTTAVNYRSENHDRLHIRGTGPQQDRFLIRSYPLGLTAIHGDQDLAEELAYDTSEALPRPL DKERDGHFFAKLANYPTPRLVHPCRKIVFSIRSHDQGFGGEPGTRETYNSSWTWFEAGLERFDASQICDEKCGYD VRRDSPSSTAPVLPVCGLRPLQPLIEKSEAGDDGDGGHEYKYKHNLLHNKNWEIHRNLVAKGEWQDHVVTWSYLD DIKPDSDAGMALDEEGRGRETGDGSFVRSLKLGDVVTVWGKARFPGWTNNVESVKVDVYWAV* |
Coding | >Hirsu2|7230 ATGCTCCTGGAGTTCCTGTCGCTGCTCGCGCTCAGCTTCATCATGGCTCACCTGGTCCCTGCCGCGCTGATCCGC CGCCTGCGCGACATGGAGCGGCCCGAGAGCCCGGAGGTGGTGCCGGCCGAGACGTCGCCGGCGGCGGACGACGAC CGCTTCCACCCGACGCCCATCGACATCGCCGTGATGCGCATCATGCTCGTACGCAGCAAGAGACTGCCGCCGGAC CTGGTCGACTCCATTTTCGACCACGCCGAGTACTGGGCTCACTCGACTACCGCCGTCAACTACCGCTCCGAGAAT CATGACCGCCTGCACATCCGAGGCACTGGGCCACAGCAGGACCGATTTCTGATCCGATCCTATCCTCTCGGCCTG ACGGCTATCCATGGAGACCAGGATCTGGCCGAGGAGCTGGCCTACGATACCAGCGAAGCTCTACCGCGACCTCTG GACAAGGAGCGCGACGGGCACTTCTTTGCCAAGCTAGCCAACTACCCGACTCCAAGGCTGGTCCACCCTTGTCGC AAGATCGTCTTTTCTATCAGGAGCCATGACCAAGGCTTCGGCGGCGAGCCAGGGACGAGAGAGACGTACAACTCT TCGTGGACCTGGTTCGAGGCTGGTCTGGAGCGGTTTGACGCCTCGCAAATCTGCGACGAGAAGTGCGGCTATGAC GTCCGTCGCGACTCGCCCAGCTCAACCGCCCCCGTACTCCCCGTGTGTGGCCTGCGGCCGCTACAGCCGCTGATC GAGAAAAGCGAGGCCGGGGACGATGGGGATGGGGGCCACGAATACAAGTACAAGCACAATCTGCTGCACAACAAG AATTGGGAGATTCACCGGAACCTGGTGGCCAAGGGCGAGTGGCAGGACCACGTAGTGACGTGGTCGTACCTCGAC GACATCAAGCCCGACTCGGACGCGGGCATGGCGCTCGACGAGGAAGGGCGGGGGCGTGAGACGGGCGACGGATCG TTCGTGCGAAGCCTGAAGCTCGGAGACGTAGTCACGGTCTGGGGCAAGGCGAGGTTTCCTGGGTGGACCAACAAT GTCGAGTCTGTCAAGGTTGACGTGTACTGGGCTGTCTGA |
Transcript | >Hirsu2|7230 ATGCTCCTGGAGTTCCTGTCGCTGCTCGCGCTCAGCTTCATCATGGCTCACCTGGTCCCTGCCGCGCTGATCCGC CGCCTGCGCGACATGGAGCGGCCCGAGAGCCCGGAGGTGGTGCCGGCCGAGACGTCGCCGGCGGCGGACGACGAC CGCTTCCACCCGACGCCCATCGACATCGCCGTGATGCGCATCATGCTCGTACGCAGCAAGAGACTGCCGCCGGAC CTGGTCGACTCCATTTTCGACCACGCCGAGTACTGGGCTCACTCGACTACCGCCGTCAACTACCGCTCCGAGAAT CATGACCGCCTGCACATCCGAGGCACTGGGCCACAGCAGGACCGATTTCTGATCCGATCCTATCCTCTCGGCCTG ACGGCTATCCATGGAGACCAGGATCTGGCCGAGGAGCTGGCCTACGATACCAGCGAAGCTCTACCGCGACCTCTG GACAAGGAGCGCGACGGGCACTTCTTTGCCAAGCTAGCCAACTACCCGACTCCAAGGCTGGTCCACCCTTGTCGC AAGATCGTCTTTTCTATCAGGAGCCATGACCAAGGCTTCGGCGGCGAGCCAGGGACGAGAGAGACGTACAACTCT TCGTGGACCTGGTTCGAGGCTGGTCTGGAGCGGTTTGACGCCTCGCAAATCTGCGACGAGAAGTGCGGCTATGAC GTCCGTCGCGACTCGCCCAGCTCAACCGCCCCCGTACTCCCCGTGTGTGGCCTGCGGCCGCTACAGCCGCTGATC GAGAAAAGCGAGGCCGGGGACGATGGGGATGGGGGCCACGAATACAAGTACAAGCACAATCTGCTGCACAACAAG AATTGGGAGATTCACCGGAACCTGGTGGCCAAGGGCGAGTGGCAGGACCACGTAGTGACGTGGTCGTACCTCGAC GACATCAAGCCCGACTCGGACGCGGGCATGGCGCTCGACGAGGAAGGGCGGGGGCGTGAGACGGGCGACGGATCG TTCGTGCGAAGCCTGAAGCTCGGAGACGTAGTCACGGTCTGGGGCAAGGCGAGGTTTCCTGGGTGGACCAACAAT GTCGAGTCTGTCAAGGTTGACGTGTACTGGGCTGTCTGA |
Gene | >Hirsu2|7230 ATGCTCCTGGAGTTCCTGTCGCTGCTCGCGCTCAGCTTCATCATGGCTCACCTGGTCCCTGCCGCGCTGATCCGC CGCCTGCGCGACATGGAGCGGCCCGAGAGCCCGGAGGTGGTGCCGGCCGAGACGTCGCCGGCGGCGGACGACGAC CGCTTCCACCCGACGCCCATCGACATCGCCGTGATGCGCATCATGCTCGTACGCAGCAAGAGACTGCCGCCGGAC CTGGTCGACTCCATTTTCGACCACGCCGAGTACTGGGCTCACTCGACTACCGCCGTCAACTACCGCTCCGAGAAT CATGACCGCCTGCACATCCGAGGCACTGGGCCACAGCAGGACCGATTTCTGGTACGCCATGTGCCCCCCCCATTT TTGCGCTCTGCCTTCTCCTACTGACAGTGCACCGTCGCTCGACGCCGGTCCCAGATCCGATCCTATCCTCTCGGC CTGACGGCTATCCATGGAGACCAGGATCTGGCCGAGGAGCTGGCCTACGATACCAGCGAAGCTCTACCGCGACCT CTGGACAAGGAGCGCGACGGGCACTTCTTTGCCAAGCTAGCCAACTACCCGACTCCAAGGCTGGTCCACCCTTGT CGCAAGATCGTCTTTTCTATCAGGAGCCATGACCAAGGCTTCGGCGGCGAGCCAGGGACGAGAGAGACGTACAAC TCTTCGTGGACCTGGTTCGAGGCTGGTCTGGAGCGGTTTGACGCCTCGCAAATCTGTGAGTGGCCTAATGGCCTT CCATTCTTCGGCATGTTACGCGGCGGACACGATGCGAGAAAGCGTTACTAACCCGAGCAGGCGACGAGAAGTGCG GCTATGACGTCCGTCGCGACTCGCCCAGCTCAACCGCCCCCGTACTCCCCGTGTGTGGCCTGCGGCCGCTACAGC CGCTGATCGAGAAAAGCGAGGCCGGGGACGATGGGGATGGGGGCCACGAATACAAGTACAAGCACAATCTGCTGC ACAACAAGAATTGGGAGATTCACCGGAACCTGGTGGCCAAGGGCGAGTGGCAGGACCACGTAGTGACGTGGTCGT ACCTCGACGACATCAAGCCCGACTCGGACGCGGGCATGGCGCTCGACGAGGAAGGGCGGGGGCGTGAGACGGGCG ACGGATCGTTCGTGCGAAGCCTGAAGCTCGGAGACGTAGTCACGGTCTGGGGCAAGGCGAGGTTTCCTGGGTGGA CCAACAATGTCGAGTCTGTCAAGGTTGACGTGTACTGGGCTGTCTGA |