© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7226 |
| Gene name | |
| Location | Contig_409:8891..9992 |
| Strand | + |
| Gene length (bp) | 1101 |
| Transcript length (bp) | 1101 |
| Coding sequence length (bp) | 1101 |
| Protein length (aa) | 367 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1456 | 0.0692 | 0.933 | 0.1651 | 0.0515 | 0.0347 | 0.1922 | 0.1896 | 0.2188 | 0.002 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.978831 |
| Orthofinder run ID | 4 |
| Orthogroup | 7107 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|3209 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|2669 |
| Ophiocordyceps subramaniannii | Hirsu2|7226 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7226 MLPLLFVALFTAAARCHVPPSAFEATLNILGRRQGDLVTTPLEQLSKAAKVANKSYAQAQETAEQAKRYHEKETE LFTQTSKASECYTSLNAILKVHPDDGKDTETFKKKKGNCDKEYADCQSLLYQALKIAKGAHLPKERLSNIELPDV RDGGLDIDHLLQNLHQVSKQASKVKAQTEQLPDYRPQLKDLVDSLSKAKDCYQKGGRGSGKAASDGTKSACNDLD TKARAKLEEVRKLAKEPGFPGGDMLSKFNIDEGGDNKTQAADKISDEGKERQTDTVKKDSPEAKKTIADLSEKIN KTEIGQIIRDAVVKLEKFVALNNVTNGGTDESAAKAAKEAGIVCLEGILKRTDDIVNKAFGSLSAQ* |
| Coding | >Hirsu2|7226 ATGCTTCCCCTCCTTTTCGTCGCGCTCTTTACGGCGGCCGCACGATGCCATGTTCCCCCTTCGGCTTTTGAGGCA ACGCTCAACATTCTGGGCCGCCGTCAGGGTGATCTGGTTACGACTCCCCTTGAACAGCTATCTAAAGCAGCAAAA GTCGCGAATAAATCATATGCTCAAGCGCAAGAGACGGCGGAACAAGCAAAGAGGTATCACGAAAAGGAAACTGAG CTATTCACACAGACCTCCAAGGCTTCCGAATGCTATACCTCATTGAATGCTATCCTCAAGGTGCATCCTGATGAT GGCAAAGACACGGAGACTTTCAAAAAGAAAAAGGGAAACTGCGATAAAGAGTACGCCGACTGCCAGTCCTTGCTG TACCAGGCCCTCAAGATAGCCAAGGGAGCCCACCTGCCTAAGGAACGGCTCTCCAACATAGAGTTGCCTGACGTG CGGGATGGGGGGCTGGACATAGATCACCTTCTGCAAAACTTACATCAAGTCTCGAAGCAAGCGTCCAAGGTGAAA GCACAAACGGAGCAACTGCCCGATTACCGCCCTCAGTTGAAGGATCTTGTCGACTCCCTATCCAAGGCTAAAGAC TGCTACCAGAAAGGGGGACGTGGCTCGGGAAAAGCCGCATCGGACGGCACCAAGTCCGCCTGTAATGACCTCGAC ACTAAAGCCAGGGCGAAGCTTGAAGAAGTCCGGAAATTGGCCAAAGAGCCTGGCTTTCCCGGCGGCGACATGTTG TCGAAGTTCAACATCGACGAGGGCGGCGACAACAAGACGCAGGCCGCTGACAAAATTTCGGACGAGGGGAAGGAG CGCCAGACCGACACGGTAAAGAAGGATTCTCCGGAAGCAAAGAAAACTATCGCAGACTTGTCCGAGAAAATCAAT AAGACTGAGATAGGTCAGATAATCAGGGACGCGGTGGTGAAGCTGGAAAAGTTCGTGGCGCTTAACAACGTGACA AATGGCGGAACGGATGAGTCTGCCGCGAAAGCCGCGAAAGAGGCCGGGATCGTGTGCCTAGAGGGCATATTAAAG AGGACTGACGACATTGTCAACAAGGCGTTCGGAAGTCTCTCTGCCCAATGA |
| Transcript | >Hirsu2|7226 ATGCTTCCCCTCCTTTTCGTCGCGCTCTTTACGGCGGCCGCACGATGCCATGTTCCCCCTTCGGCTTTTGAGGCA ACGCTCAACATTCTGGGCCGCCGTCAGGGTGATCTGGTTACGACTCCCCTTGAACAGCTATCTAAAGCAGCAAAA GTCGCGAATAAATCATATGCTCAAGCGCAAGAGACGGCGGAACAAGCAAAGAGGTATCACGAAAAGGAAACTGAG CTATTCACACAGACCTCCAAGGCTTCCGAATGCTATACCTCATTGAATGCTATCCTCAAGGTGCATCCTGATGAT GGCAAAGACACGGAGACTTTCAAAAAGAAAAAGGGAAACTGCGATAAAGAGTACGCCGACTGCCAGTCCTTGCTG TACCAGGCCCTCAAGATAGCCAAGGGAGCCCACCTGCCTAAGGAACGGCTCTCCAACATAGAGTTGCCTGACGTG CGGGATGGGGGGCTGGACATAGATCACCTTCTGCAAAACTTACATCAAGTCTCGAAGCAAGCGTCCAAGGTGAAA GCACAAACGGAGCAACTGCCCGATTACCGCCCTCAGTTGAAGGATCTTGTCGACTCCCTATCCAAGGCTAAAGAC TGCTACCAGAAAGGGGGACGTGGCTCGGGAAAAGCCGCATCGGACGGCACCAAGTCCGCCTGTAATGACCTCGAC ACTAAAGCCAGGGCGAAGCTTGAAGAAGTCCGGAAATTGGCCAAAGAGCCTGGCTTTCCCGGCGGCGACATGTTG TCGAAGTTCAACATCGACGAGGGCGGCGACAACAAGACGCAGGCCGCTGACAAAATTTCGGACGAGGGGAAGGAG CGCCAGACCGACACGGTAAAGAAGGATTCTCCGGAAGCAAAGAAAACTATCGCAGACTTGTCCGAGAAAATCAAT AAGACTGAGATAGGTCAGATAATCAGGGACGCGGTGGTGAAGCTGGAAAAGTTCGTGGCGCTTAACAACGTGACA AATGGCGGAACGGATGAGTCTGCCGCGAAAGCCGCGAAAGAGGCCGGGATCGTGTGCCTAGAGGGCATATTAAAG AGGACTGACGACATTGTCAACAAGGCGTTCGGAAGTCTCTCTGCCCAATGA |
| Gene | >Hirsu2|7226 ATGCTTCCCCTCCTTTTCGTCGCGCTCTTTACGGCGGCCGCACGATGCCATGTTCCCCCTTCGGCTTTTGAGGCA ACGCTCAACATTCTGGGCCGCCGTCAGGGTGATCTGGTTACGACTCCCCTTGAACAGCTATCTAAAGCAGCAAAA GTCGCGAATAAATCATATGCTCAAGCGCAAGAGACGGCGGAACAAGCAAAGAGGTATCACGAAAAGGAAACTGAG CTATTCACACAGACCTCCAAGGCTTCCGAATGCTATACCTCATTGAATGCTATCCTCAAGGTGCATCCTGATGAT GGCAAAGACACGGAGACTTTCAAAAAGAAAAAGGGAAACTGCGATAAAGAGTACGCCGACTGCCAGTCCTTGCTG TACCAGGCCCTCAAGATAGCCAAGGGAGCCCACCTGCCTAAGGAACGGCTCTCCAACATAGAGTTGCCTGACGTG CGGGATGGGGGGCTGGACATAGATCACCTTCTGCAAAACTTACATCAAGTCTCGAAGCAAGCGTCCAAGGTGAAA GCACAAACGGAGCAACTGCCCGATTACCGCCCTCAGTTGAAGGATCTTGTCGACTCCCTATCCAAGGCTAAAGAC TGCTACCAGAAAGGGGGACGTGGCTCGGGAAAAGCCGCATCGGACGGCACCAAGTCCGCCTGTAATGACCTCGAC ACTAAAGCCAGGGCGAAGCTTGAAGAAGTCCGGAAATTGGCCAAAGAGCCTGGCTTTCCCGGCGGCGACATGTTG TCGAAGTTCAACATCGACGAGGGCGGCGACAACAAGACGCAGGCCGCTGACAAAATTTCGGACGAGGGGAAGGAG CGCCAGACCGACACGGTAAAGAAGGATTCTCCGGAAGCAAAGAAAACTATCGCAGACTTGTCCGAGAAAATCAAT AAGACTGAGATAGGTCAGATAATCAGGGACGCGGTGGTGAAGCTGGAAAAGTTCGTGGCGCTTAACAACGTGACA AATGGCGGAACGGATGAGTCTGCCGCGAAAGCCGCGAAAGAGGCCGGGATCGTGTGCCTAGAGGGCATATTAAAG AGGACTGACGACATTGTCAACAAGGCGTTCGGAAGTCTCTCTGCCCAATGA |