Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7217
Gene name
LocationContig_408:8832..9435
Strand+
Gene length (bp)603
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0884 0.0961 0.8656 0.072 0.1984 0.0192 0.197 0.1983 0.1008 0.0298

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.99964

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3709
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5056
Ophiocordyceps australis map64 (Brazil) OphauB2|7454
Ophiocordyceps camponoti-floridani Ophcf2|06237
Ophiocordyceps camponoti-rufipedis Ophun1|5425
Ophiocordyceps kimflemingae Ophio5|2107
Ophiocordyceps subramaniannii Hirsu2|7217 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7217
MKTTLAGCLLLSGLVHGQSDSGSAAPACVTECTQVLSRHSASSGAMRALCDDTASQRALFQCLVDSCRSRSYGPA
LGHVVSACSRLGSDISPLHPIESWV*
Coding >Hirsu2|7217
ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC
CCAGCATGCGTGACCGAGTGCACCCAAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGC
GACGACACCGCAAGCCAAAGAGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCGCTCGTATGGCCCGGCC
CTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCCCATTGAGAGCTGGGTC
TGA
Transcript >Hirsu2|7217
ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC
CCAGCATGCGTGACCGAGTGCACCCAAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGC
GACGACACCGCAAGCCAAAGAGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCGCTCGTATGGCCCGGCC
CTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCCCATTGAGAGCTGGGTC
TGA
Gene >Hirsu2|7217
ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC
CCAGGTGAGTGGCCTCGAGCATTCGTGAGACATCCTTCTGACGTCTGCGTGTAGCATGCGTGACCGAGTGCACCC
AAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGCGACGACACCGCAAGCCAAAGAGTGA
GTGGGAGACGGGTGCATTCGATGTCGTCGCCCCTGGCTTTGCTCGCTTTCCCAAGCCCGCTCTCTCTTCCCGACT
TGTCACTGACGCCCTTGCTGACACCGCGCGTCGACAGGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCG
CTCGTATGGCCCGGCCCTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCC
CATTGAGGTTCATTATGCTCCCCTTCCTAAACGACAGGTCATCTCCACCGAATCGGCCTCGATGCTTTCCGGCTC
TTCTCCGCCCTTTAAGGCCCAGGCTCTCGCCTTCAACCATCGACTCTTGATGGCTGTGGACTGCAGAGCTGGGTC
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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