Protein ID | Hirsu2|7217 |
Gene name | |
Location | Contig_408:8832..9435 |
Strand | + |
Gene length (bp) | 603 |
Transcript length (bp) | 303 |
Coding sequence length (bp) | 303 |
Protein length (aa) | 101 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0884 | 0.0961 | 0.8656 | 0.072 | 0.1984 | 0.0192 | 0.197 | 0.1983 | 0.1008 | 0.0298 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.99964 |
Orthofinder run ID | 4 |
Orthogroup | 3709 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7217 MKTTLAGCLLLSGLVHGQSDSGSAAPACVTECTQVLSRHSASSGAMRALCDDTASQRALFQCLVDSCRSRSYGPA LGHVVSACSRLGSDISPLHPIESWV* |
Coding | >Hirsu2|7217 ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC CCAGCATGCGTGACCGAGTGCACCCAAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGC GACGACACCGCAAGCCAAAGAGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCGCTCGTATGGCCCGGCC CTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCCCATTGAGAGCTGGGTC TGA |
Transcript | >Hirsu2|7217 ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC CCAGCATGCGTGACCGAGTGCACCCAAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGC GACGACACCGCAAGCCAAAGAGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCGCTCGTATGGCCCGGCC CTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCCCATTGAGAGCTGGGTC TGA |
Gene | >Hirsu2|7217 ATGAAGACGACACTCGCCGGCTGCCTGCTCCTCTCGGGGCTGGTCCATGGGCAGAGCGACTCGGGTTCTGCGGCC CCAGGTGAGTGGCCTCGAGCATTCGTGAGACATCCTTCTGACGTCTGCGTGTAGCATGCGTGACCGAGTGCACCC AAGTCCTGTCGCGCCATTCGGCTTCGTCTGGAGCGATGCGAGCTCTCTGCGACGACACCGCAAGCCAAAGAGTGA GTGGGAGACGGGTGCATTCGATGTCGTCGCCCCTGGCTTTGCTCGCTTTCCCAAGCCCGCTCTCTCTTCCCGACT TGTCACTGACGCCCTTGCTGACACCGCGCGTCGACAGGCTTTGTTCCAATGCCTGGTCGACTCGTGCCGCTCGCG CTCGTATGGCCCGGCCCTGGGCCACGTCGTCTCTGCCTGCTCGCGCCTGGGCAGCGACATCAGCCCACTGCATCC CATTGAGGTTCATTATGCTCCCCTTCCTAAACGACAGGTCATCTCCACCGAATCGGCCTCGATGCTTTCCGGCTC TTCTCCGCCCTTTAAGGCCCAGGCTCTCGCCTTCAACCATCGACTCTTGATGGCTGTGGACTGCAGAGCTGGGTC TGA |