© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|72 |
| Gene name | |
| Location | Contig_1009:3573..4214 |
| Strand | + |
| Gene length (bp) | 641 |
| Transcript length (bp) | 561 |
| Coding sequence length (bp) | 561 |
| Protein length (aa) | 187 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19968|NUZM_NEUCR | NADH-ubiquinone oxidoreductase 21.3 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=20H10.080 PE=2 SV=2 | 1 | 185 | 1.0E-66 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1883 | 0.1286 | 0.0448 | 0.122 | 0.9692 | 0.165 | 0.066 | 0.0302 | 0.0545 | 0.039 |
| Orthofinder run ID | 4 |
| Orthogroup | 3699 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|72 MSSKAVATAAGGVVSIAKKQTLQSQGIWERFRRAFALDPNRSNGVPLNPWYRNPPPGANEPLAYDDPVTTPAGDI ADNAYWRRDVRRATPRPSLVGQADVVELLTVGSAARPLGELVGEAGERRLVAARQEGETGLARCLAKEPDSVATQ VLVDGMPPLPSGQCLVSGKWGVYEYKRAEEDSYPEE* |
| Coding | >Hirsu2|72 ATGTCGTCCAAGGCCGTGGCGACCGCCGCGGGCGGCGTGGTGTCCATTGCCAAAAAACAAACGCTGCAGTCGCAG GGCATCTGGGAACGCTTCCGGCGGGCCTTCGCCCTCGACCCGAACCGGTCCAACGGCGTGCCGCTCAACCCGTGG TACCGCAACCCGCCGCCGGGGGCCAACGAGCCGCTGGCGTACGACGACCCCGTGACGACGCCGGCCGGCGACATC GCCGACAACGCCTACTGGCGGCGCGACGTGCGCCGCGCCACCCCGCGGCCCAGCCTCGTCGGCCAGGCCGACGTC GTCGAGCTGCTGACTGTCGGCAGCGCCGCCCGGCCCCTCGGCGAGCTGGTCGGCGAGGCCGGCGAGCGCCGCCTC GTCGCCGCCCGCCAAGAGGGCGAGACGGGCCTGGCCCGCTGCCTGGCCAAGGAGCCCGATTCCGTGGCCACGCAG GTCCTCGTCGACGGCATGCCGCCGCTGCCCAGCGGCCAGTGCCTCGTGTCCGGCAAGTGGGGTGTCTACGAGTAC AAGCGGGCCGAGGAGGATTCGTACCCCGAGGAGTGA |
| Transcript | >Hirsu2|72 ATGTCGTCCAAGGCCGTGGCGACCGCCGCGGGCGGCGTGGTGTCCATTGCCAAAAAACAAACGCTGCAGTCGCAG GGCATCTGGGAACGCTTCCGGCGGGCCTTCGCCCTCGACCCGAACCGGTCCAACGGCGTGCCGCTCAACCCGTGG TACCGCAACCCGCCGCCGGGGGCCAACGAGCCGCTGGCGTACGACGACCCCGTGACGACGCCGGCCGGCGACATC GCCGACAACGCCTACTGGCGGCGCGACGTGCGCCGCGCCACCCCGCGGCCCAGCCTCGTCGGCCAGGCCGACGTC GTCGAGCTGCTGACTGTCGGCAGCGCCGCCCGGCCCCTCGGCGAGCTGGTCGGCGAGGCCGGCGAGCGCCGCCTC GTCGCCGCCCGCCAAGAGGGCGAGACGGGCCTGGCCCGCTGCCTGGCCAAGGAGCCCGATTCCGTGGCCACGCAG GTCCTCGTCGACGGCATGCCGCCGCTGCCCAGCGGCCAGTGCCTCGTGTCCGGCAAGTGGGGTGTCTACGAGTAC AAGCGGGCCGAGGAGGATTCGTACCCCGAGGAGTGA |
| Gene | >Hirsu2|72 ATGTCGTCCAAGGCCGTGGCGACCGCCGCGGGCGGCGTGGTGTCCATTGCCAAAGTACGTAAACCGTCTTCCCCG GCGCCAATTCCCGCCTCCTGAGTCCCGGAGAGAGCGCGGCGGCTGACGAGGGGGCACAGAAACAAACGCTGCAGT CGCAGGGCATCTGGGAACGCTTCCGGCGGGCCTTCGCCCTCGACCCGAACCGGTCCAACGGCGTGCCGCTCAACC CGTGGTACCGCAACCCGCCGCCGGGGGCCAACGAGCCGCTGGCGTACGACGACCCCGTGACGACGCCGGCCGGCG ACATCGCCGACAACGCCTACTGGCGGCGCGACGTGCGCCGCGCCACCCCGCGGCCCAGCCTCGTCGGCCAGGCCG ACGTCGTCGAGCTGCTGACTGTCGGCAGCGCCGCCCGGCCCCTCGGCGAGCTGGTCGGCGAGGCCGGCGAGCGCC GCCTCGTCGCCGCCCGCCAAGAGGGCGAGACGGGCCTGGCCCGCTGCCTGGCCAAGGAGCCCGATTCCGTGGCCA CGCAGGTCCTCGTCGACGGCATGCCGCCGCTGCCCAGCGGCCAGTGCCTCGTGTCCGGCAAGTGGGGTGTCTACG AGTACAAGCGGGCCGAGGAGGATTCGTACCCCGAGGAGTGA |