© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7191 |
| Gene name | |
| Location | Contig_404:9129..10105 |
| Strand | + |
| Gene length (bp) | 976 |
| Transcript length (bp) | 579 |
| Coding sequence length (bp) | 579 |
| Protein length (aa) | 193 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10785 | NADH-u_ox-rdase | NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit | 1.7E-27 | 22 | 107 |
| PF12853 | NADH_u_ox_C | C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit | 9.6E-26 | 116 | 190 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02854|NUXM_NEUCR | NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo20.9 PE=1 SV=1 | 6 | 192 | 9.0E-92 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 63 | 18 |
| 2 | 78 | 95 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7191 MADTTTTQKPPSYVGTSKVVETDYPLIDNDPHFKRVVGYARRSDYVAGALAASFAPVALLTLERFAPSHVGRGGF PKVLRLAGFIGLAGGFLYFYQRSCLRFYGATENSREIEMDMREMVDKVKAGQPLYGESKLSPYLQGVAARQSRYS ALFLSTVPWFNFVNHNQHGVDTAKYYQQAERELEAERAVKGS* |
| Coding | >Hirsu2|7191 ATGGCGGACACGACGACGACACAGAAACCCCCTTCCTACGTGGGCACGAGCAAGGTGGTAGAGACGGACTATCCG CTCATCGACAATGACCCCCACTTCAAGCGCGTGGTAGGCTACGCCCGGAGGTCGGACTACGTCGCCGGCGCGCTG GCGGCCTCGTTCGCGCCCGTGGCGCTCTTGACGCTCGAGCGGTTCGCGCCCTCGCACGTCGGCAGGGGCGGCTTC CCCAAGGTCTTGCGTCTGGCCGGCTTCATCGGCCTGGCCGGCGGCTTCCTCTACTTTTACCAACGCTCGTGCCTG CGGTTCTACGGCGCGACGGAGAACTCGCGCGAGATCGAAATGGACATGCGCGAGATGGTGGACAAGGTCAAGGCC GGGCAGCCGCTCTACGGCGAGAGCAAGCTGAGCCCGTACCTGCAGGGCGTCGCGGCGCGACAGAGCCGCTACTCG GCCCTCTTCCTCAGCACCGTGCCGTGGTTCAACTTTGTCAACCACAACCAGCACGGCGTCGACACGGCCAAGTAT TACCAGCAGGCCGAGCGGGAGCTGGAGGCAGAGCGGGCGGTCAAGGGCTCGTGA |
| Transcript | >Hirsu2|7191 ATGGCGGACACGACGACGACACAGAAACCCCCTTCCTACGTGGGCACGAGCAAGGTGGTAGAGACGGACTATCCG CTCATCGACAATGACCCCCACTTCAAGCGCGTGGTAGGCTACGCCCGGAGGTCGGACTACGTCGCCGGCGCGCTG GCGGCCTCGTTCGCGCCCGTGGCGCTCTTGACGCTCGAGCGGTTCGCGCCCTCGCACGTCGGCAGGGGCGGCTTC CCCAAGGTCTTGCGTCTGGCCGGCTTCATCGGCCTGGCCGGCGGCTTCCTCTACTTTTACCAACGCTCGTGCCTG CGGTTCTACGGCGCGACGGAGAACTCGCGCGAGATCGAAATGGACATGCGCGAGATGGTGGACAAGGTCAAGGCC GGGCAGCCGCTCTACGGCGAGAGCAAGCTGAGCCCGTACCTGCAGGGCGTCGCGGCGCGACAGAGCCGCTACTCG GCCCTCTTCCTCAGCACCGTGCCGTGGTTCAACTTTGTCAACCACAACCAGCACGGCGTCGACACGGCCAAGTAT TACCAGCAGGCCGAGCGGGAGCTGGAGGCAGAGCGGGCGGTCAAGGGCTCGTGA |
| Gene | >Hirsu2|7191 ATGGCGGACACGACGACGACACAGAAACCCCCTTCCTACGTGGGCACGAGCAAGGTGGTAGAGACGGACTATCCG GTAACGAATTGACCCCCCCTCGCCGCTCGTTCAGCGAGCGACCTTGCCTCACTTCGAAGCGGCGACCAAGCTGAC CCGATCCCAGCTCATCGACAATGACCCGTACGCCTTCCTGATCTCTCTACCCCCTCTTTCACCCTGCTTTCCTGC GACGCGGCAGACAATCGATCGGGATAAGAAGAGAAGCTGACGCTTGCCTCCCCGCGCCGCAGCCACTTCAAGCGC GTGGTAGGCTACGCCCGGAGGTCGGACTACGTCGCCGGCGCGCTGGCGGCCTCGTTCGCGCCCGTGGCGCTCTTG ACGCTCGAGCGGTTCGCGCCCTCGCACGTCGGCAGGGGCGGCTTCCCCAAGGTCTTGCGTCTGGCCGGCTTCATC GGCCTGGCCGGCGGCTTCCTCTACTTTTACCAACGCTCGTGCCGTACGTCCGAACCGAATTCCTTACTGTCATGG GAGCGAAGGCGGAGAACACGATGGGAAGAGGACCAGGCAGCAAGATGAGGGGGGGGAAGACGTCGAAGAGAGAGG CAGACGAAAAGGGAGAGGGGGGGAAGATGTGGTCGATGACCAAGGATGGGATCCCCTTTTTTTCGTCTTGGCTGT CGGACTAACAAGGGCGGCAGTGCGGTTCTACGGCGCGACGGAGAACTCGCGCGAGATCGAAATGGACATGCGCGA GATGGTGGACAAGGTCAAGGCCGGGCAGCCGCTCTACGGCGAGAGCAAGCTGAGCCCGTACCTGCAGGGCGTCGC GGCGCGACAGAGCCGCTACTCGGCCCTCTTCCTCAGCACCGTGCCGTGGTTCAACTTTGTCAACCACAACCAGCA CGGCGTCGACACGGCCAAGTATTACCAGCAGGCCGAGCGGGAGCTGGAGGCAGAGCGGGCGGTCAAGGGCTCGTG A |