Protein ID | Hirsu2|7173 |
Gene name | |
Location | Contig_401:4558..6525 |
Strand | + |
Gene length (bp) | 1967 |
Transcript length (bp) | 1842 |
Coding sequence length (bp) | 1842 |
Protein length (aa) | 614 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 4.2E-10 | 237 | 383 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4APQ6|TRXR_ARTBC | Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 | 236 | 564 | 2.0E-83 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 49 | 165 | 1.0E-10 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 49 | 165 | 2.0E-10 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 56 | 186 | 3.0E-10 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 56 | 186 | 3.0E-10 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4APQ6|TRXR_ARTBC | Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 | 236 | 564 | 2.0E-83 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 49 | 165 | 1.0E-10 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 49 | 165 | 2.0E-10 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 56 | 186 | 3.0E-10 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 56 | 186 | 3.0E-10 |
sp|P0C6U4|R1A_CVHN2 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N2) GN=1a PE=3 SV=1 | 56 | 165 | 2.0E-09 |
sp|P0C6X3|R1AB_CVHN2 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N2) GN=rep PE=3 SV=1 | 56 | 165 | 2.0E-09 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 58 | 219 | 4.0E-08 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 58 | 219 | 4.0E-08 |
sp|P0C6U4|R1A_CVHN2 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N2) GN=1a PE=3 SV=1 | 49 | 165 | 5.0E-08 |
sp|P0C6X3|R1AB_CVHN2 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N2) GN=rep PE=3 SV=1 | 49 | 165 | 5.0E-08 |
sp|P0C6U3|R1A_CVHN1 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 | 49 | 165 | 2.0E-07 |
sp|P0C6X2|R1AB_CVHN1 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 | 49 | 165 | 2.0E-07 |
sp|Q9ZL18|TRXB_HELPJ | Thioredoxin reductase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=trxB PE=3 SV=1 | 238 | 411 | 1.0E-06 |
sp|Q5HQW4|TRXB_STAEQ | Thioredoxin reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxB PE=3 SV=1 | 237 | 388 | 1.0E-06 |
sp|Q8CPY8|TRXB_STAES | Thioredoxin reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxB PE=3 SV=1 | 237 | 388 | 1.0E-06 |
sp|P0C6U5|R1A_CVHN5 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N5) GN=1a PE=3 SV=1 | 56 | 165 | 2.0E-06 |
sp|P0C6X4|R1AB_CVHN5 | Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N5) GN=rep PE=3 SV=1 | 56 | 165 | 2.0E-06 |
sp|Q6GIM7|TRXB_STAAR | Thioredoxin reductase OS=Staphylococcus aureus (strain MRSA252) GN=trxB PE=3 SV=1 | 237 | 388 | 2.0E-06 |
sp|P66011|TRXB_STAAW | Thioredoxin reductase OS=Staphylococcus aureus (strain MW2) GN=trxB PE=1 SV=1 | 237 | 388 | 2.0E-06 |
sp|Q6GB66|TRXB_STAAS | Thioredoxin reductase OS=Staphylococcus aureus (strain MSSA476) GN=trxB PE=3 SV=1 | 237 | 388 | 2.0E-06 |
sp|P99101|TRXB_STAAN | Thioredoxin reductase OS=Staphylococcus aureus (strain N315) GN=trxB PE=1 SV=1 | 237 | 388 | 2.0E-06 |
sp|P66010|TRXB_STAAM | Thioredoxin reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxB PE=3 SV=1 | 237 | 388 | 2.0E-06 |
sp|Q5HHQ4|TRXB_STAAC | Thioredoxin reductase OS=Staphylococcus aureus (strain COL) GN=trxB PE=3 SV=1 | 237 | 388 | 2.0E-06 |
sp|P56431|TRXB_HELPY | Thioredoxin reductase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=trxB PE=1 SV=1 | 238 | 411 | 6.0E-06 |
sp|P0C6U5|R1A_CVHN5 | Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N5) GN=1a PE=3 SV=1 | 58 | 164 | 1.0E-05 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1543 | 0.0433 | 0.836 | 0.1022 | 0.1563 | 0.2945 | 0.0894 | 0.1127 | 0.1263 | 0.0136 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999082 |
Orthofinder run ID | 4 |
Orthogroup | 544 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7173 MRPLAAVLVTAVAAAATTVVARTDRAVAVRAAEARPYDYGGYGSGRRYGDDDYGREDDGDDDDDDDDDDDDDDDD DDDDDGDGRGSTGRDDDGDDDDDDDDRGGRGGDDRDDEGDDDDDDGDGRGGDDRDDGDSDDDKGSSARDDGKDGK EDQEDAHGRGEDDEEGSSARDRGKENQEYASGRGEDAPGKEDGKKVEAEANVTVSKDDKQANITDAGTDGKYRED GNFDESKNHTRYDVIIVGGGPSGLSALSGLARVRRNVLLIDSGEYRNGPTGHMHDVLGFDGVTPAYYRWAARRQL SFYKTASMTNGTVTSIKPAGDKGDRYFSVTRSRGGKSTELTARKIILGTGLRDLLPATPGVRENWGKGIYWCAWC DGHEHADQKLGIIARLDRSMGQVRQMLTLNRDIVVLTNATDSAETRISLERTDPKWQEFVRRHDVKIDNRPLKSI TLVRAGEAGRADPALPSAPEDRLFRVDFARGEPVFRNGFLISTETEQASPLGPELGVALYGGRLAADAARGLETN VAGVYAVGDANADNSTNVPHALWSGKRAAVSVHGTLAREEWDRELDAAPGGYRRFRSQKSAQHDVRAVWRMMNGR AGDLLHAGDFDRF* |
Coding | >Hirsu2|7173 ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC GGGCACATGCATGACGTCTTGGGCTTCGATGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTG TCCTTCTACAAGACGGCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGC TACTTCAGCGTGACCCGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGG CTCCGCGACCTGCTGCCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGC GACGGGCACGAGCACGCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAG ATGCTGACGCTGAACCGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAG CGGACCGACCCCAAGTGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATC ACACTGGTCCGCGCCGGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGC GTCGACTTCGCGCGCGGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCG CTCGGGCCGGAGCTGGGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAAC GTCGCCGGCGTCTACGCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGC AAGCGCGCCGCCGTCTCCGTCCACGGCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGA GGCTACAGGAGGTTCCGAAGCCAGAAGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGG GCCGGCGACCTGCTCCACGCCGGAGACTTTGACCGCTTCTAG |
Transcript | >Hirsu2|7173 ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC GGGCACATGCATGACGTCTTGGGCTTCGATGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTG TCCTTCTACAAGACGGCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGC TACTTCAGCGTGACCCGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGG CTCCGCGACCTGCTGCCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGC GACGGGCACGAGCACGCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAG ATGCTGACGCTGAACCGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAG CGGACCGACCCCAAGTGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATC ACACTGGTCCGCGCCGGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGC GTCGACTTCGCGCGCGGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCG CTCGGGCCGGAGCTGGGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAAC GTCGCCGGCGTCTACGCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGC AAGCGCGCCGCCGTCTCCGTCCACGGCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGA GGCTACAGGAGGTTCCGAAGCCAGAAGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGG GCCGGCGACCTGCTCCACGCCGGAGACTTTGACCGCTTCTAG |
Gene | >Hirsu2|7173 ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC GGGCACATGCATGACGTCTTGGGCTTCGATGGTGAGTCTCTTCATCAAGCATGAAATCCCACGAGGCCGCGCGCT CACGATGGGATGCCAGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTGTCCTTCTACAAGACG GCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGCTACTTCAGCGTGACC CGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGGCTCCGCGACCTGCTG CCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGCGACGGGCACGAGCAC GCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAGATGCTGACGCTGAAC CGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAGCGGACCGACCCCAAG TGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATCACACTGGTCCGCGCC GGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGCGTCGACTTCGCGCGC GGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCGCTCGGGCCGGAGCTG GGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAACGTCGCCGGCGTCTAC GCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGCAAGCGCGCCGCCGTC TCCGTCCACGGTGAGAGCGCCCCTCTCCCTTTCCTTCTACCCACCCCGCGAGGCGGCCGGCTGACGACGAGACAG GCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGAGGCTACAGGAGGTTCCGAAGCCAGA AGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGGGCCGGCGACCTGCTCCACGCCGGAG ACTTTGACCGCTTCTAG |