Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7173
Gene name
LocationContig_401:4558..6525
Strand+
Gene length (bp)1967
Transcript length (bp)1842
Coding sequence length (bp)1842
Protein length (aa) 614

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 4.2E-10 237 383

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4APQ6|TRXR_ARTBC Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 236 564 2.0E-83
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 49 165 1.0E-10
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 49 165 2.0E-10
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 56 186 3.0E-10
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 56 186 3.0E-10
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|D4APQ6|TRXR_ARTBC Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 236 564 2.0E-83
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 49 165 1.0E-10
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 49 165 2.0E-10
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 56 186 3.0E-10
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 56 186 3.0E-10
sp|P0C6U4|R1A_CVHN2 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N2) GN=1a PE=3 SV=1 56 165 2.0E-09
sp|P0C6X3|R1AB_CVHN2 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N2) GN=rep PE=3 SV=1 56 165 2.0E-09
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 58 219 4.0E-08
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 58 219 4.0E-08
sp|P0C6U4|R1A_CVHN2 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N2) GN=1a PE=3 SV=1 49 165 5.0E-08
sp|P0C6X3|R1AB_CVHN2 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N2) GN=rep PE=3 SV=1 49 165 5.0E-08
sp|P0C6U3|R1A_CVHN1 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N1) GN=1a PE=1 SV=1 49 165 2.0E-07
sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1) GN=rep PE=3 SV=1 49 165 2.0E-07
sp|Q9ZL18|TRXB_HELPJ Thioredoxin reductase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=trxB PE=3 SV=1 238 411 1.0E-06
sp|Q5HQW4|TRXB_STAEQ Thioredoxin reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxB PE=3 SV=1 237 388 1.0E-06
sp|Q8CPY8|TRXB_STAES Thioredoxin reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxB PE=3 SV=1 237 388 1.0E-06
sp|P0C6U5|R1A_CVHN5 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N5) GN=1a PE=3 SV=1 56 165 2.0E-06
sp|P0C6X4|R1AB_CVHN5 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N5) GN=rep PE=3 SV=1 56 165 2.0E-06
sp|Q6GIM7|TRXB_STAAR Thioredoxin reductase OS=Staphylococcus aureus (strain MRSA252) GN=trxB PE=3 SV=1 237 388 2.0E-06
sp|P66011|TRXB_STAAW Thioredoxin reductase OS=Staphylococcus aureus (strain MW2) GN=trxB PE=1 SV=1 237 388 2.0E-06
sp|Q6GB66|TRXB_STAAS Thioredoxin reductase OS=Staphylococcus aureus (strain MSSA476) GN=trxB PE=3 SV=1 237 388 2.0E-06
sp|P99101|TRXB_STAAN Thioredoxin reductase OS=Staphylococcus aureus (strain N315) GN=trxB PE=1 SV=1 237 388 2.0E-06
sp|P66010|TRXB_STAAM Thioredoxin reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxB PE=3 SV=1 237 388 2.0E-06
sp|Q5HHQ4|TRXB_STAAC Thioredoxin reductase OS=Staphylococcus aureus (strain COL) GN=trxB PE=3 SV=1 237 388 2.0E-06
sp|P56431|TRXB_HELPY Thioredoxin reductase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=trxB PE=1 SV=1 238 411 6.0E-06
sp|P0C6U5|R1A_CVHN5 Replicase polyprotein 1a OS=Human coronavirus HKU1 (isolate N5) GN=1a PE=3 SV=1 58 164 1.0E-05
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7173
MRPLAAVLVTAVAAAATTVVARTDRAVAVRAAEARPYDYGGYGSGRRYGDDDYGREDDGDDDDDDDDDDDDDDDD
DDDDDGDGRGSTGRDDDGDDDDDDDDRGGRGGDDRDDEGDDDDDDGDGRGGDDRDDGDSDDDKGSSARDDGKDGK
EDQEDAHGRGEDDEEGSSARDRGKENQEYASGRGEDAPGKEDGKKVEAEANVTVSKDDKQANITDAGTDGKYRED
GNFDESKNHTRYDVIIVGGGPSGLSALSGLARVRRNVLLIDSGEYRNGPTGHMHDVLGFDGVTPAYYRWAARRQL
SFYKTASMTNGTVTSIKPAGDKGDRYFSVTRSRGGKSTELTARKIILGTGLRDLLPATPGVRENWGKGIYWCAWC
DGHEHADQKLGIIARLDRSMGQVRQMLTLNRDIVVLTNATDSAETRISLERTDPKWQEFVRRHDVKIDNRPLKSI
TLVRAGEAGRADPALPSAPEDRLFRVDFARGEPVFRNGFLISTETEQASPLGPELGVALYGGRLAADAARGLETN
VAGVYAVGDANADNSTNVPHALWSGKRAAVSVHGTLAREEWDRELDAAPGGYRRFRSQKSAQHDVRAVWRMMNGR
AGDLLHAGDFDRF*
Coding >Hirsu2|7173
ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG
GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT
GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC
GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG
GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG
GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA
AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC
AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC
GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC
GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC
GGGCACATGCATGACGTCTTGGGCTTCGATGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTG
TCCTTCTACAAGACGGCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGC
TACTTCAGCGTGACCCGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGG
CTCCGCGACCTGCTGCCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGC
GACGGGCACGAGCACGCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAG
ATGCTGACGCTGAACCGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAG
CGGACCGACCCCAAGTGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATC
ACACTGGTCCGCGCCGGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGC
GTCGACTTCGCGCGCGGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCG
CTCGGGCCGGAGCTGGGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAAC
GTCGCCGGCGTCTACGCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGC
AAGCGCGCCGCCGTCTCCGTCCACGGCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGA
GGCTACAGGAGGTTCCGAAGCCAGAAGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGG
GCCGGCGACCTGCTCCACGCCGGAGACTTTGACCGCTTCTAG
Transcript >Hirsu2|7173
ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG
GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT
GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC
GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG
GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG
GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA
AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC
AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC
GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC
GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC
GGGCACATGCATGACGTCTTGGGCTTCGATGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTG
TCCTTCTACAAGACGGCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGC
TACTTCAGCGTGACCCGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGG
CTCCGCGACCTGCTGCCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGC
GACGGGCACGAGCACGCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAG
ATGCTGACGCTGAACCGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAG
CGGACCGACCCCAAGTGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATC
ACACTGGTCCGCGCCGGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGC
GTCGACTTCGCGCGCGGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCG
CTCGGGCCGGAGCTGGGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAAC
GTCGCCGGCGTCTACGCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGC
AAGCGCGCCGCCGTCTCCGTCCACGGCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGA
GGCTACAGGAGGTTCCGAAGCCAGAAGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGG
GCCGGCGACCTGCTCCACGCCGGAGACTTTGACCGCTTCTAG
Gene >Hirsu2|7173
ATGAGGCCCCTCGCGGCTGTGCTCGTCACCGCCGTGGCGGCGGCGGCGACGACGGTTGTTGCGAGAACCGACCGG
GCGGTGGCGGTGCGGGCGGCGGAGGCGAGGCCGTACGACTATGGCGGTTACGGGAGCGGCCGCCGCTATGGCGAT
GATGACTATGGTCGCGAGGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GACGATGATGACGACGGGGATGGCCGTGGGAGTACTGGCCGTGACGACGATGGCGATGATGATGACGATGATGAC
GACCGGGGTGGCCGTGGGGGTGACGACCGTGACGATGAAGGTGATGACGATGACGACGACGGGGATGGCCGTGGG
GGTGACGACCGCGACGATGGTGACAGTGATGACGACAAGGGCTCCTCTGCTCGTGACGATGGCAAGGATGGCAAG
GAAGACCAAGAGGATGCCCACGGCCGTGGCGAGGACGATGAAGAGGGCTCCTCTGCTCGGGACCGTGGCAAGGAA
AACCAAGAATACGCCAGCGGCCGTGGCGAGGATGCCCCTGGCAAAGAAGACGGCAAGAAAGTCGAGGCCGAGGCC
AACGTCACCGTGAGCAAGGACGACAAACAAGCCAATATCACGGATGCCGGCACGGACGGCAAATACCGCGAGGAC
GGAAACTTTGACGAGAGCAAGAACCACACTCGGTACGATGTCATCATCGTCGGCGGCGGCCCCTCCGGGCTGAGC
GCTCTGAGCGGCCTGGCCCGGGTCCGCCGAAACGTGCTCTTGATCGACTCGGGCGAGTATCGCAACGGGCCGACC
GGGCACATGCATGACGTCTTGGGCTTCGATGGTGAGTCTCTTCATCAAGCATGAAATCCCACGAGGCCGCGCGCT
CACGATGGGATGCCAGGCGTGACACCGGCATACTACCGCTGGGCCGCGCGGAGGCAGCTGTCCTTCTACAAGACG
GCCTCCATGACCAACGGCACGGTGACGAGCATCAAGCCGGCGGGGGACAAGGGCGACCGCTACTTCAGCGTGACC
CGGAGCCGGGGCGGCAAGAGCACGGAGCTGACGGCGCGCAAGATCATCCTCGGCACGGGGCTCCGCGACCTGCTG
CCGGCGACGCCGGGCGTGCGCGAGAACTGGGGCAAGGGCATCTACTGGTGCGCGTGGTGCGACGGGCACGAGCAC
GCCGACCAGAAGCTGGGCATCATCGCGCGGCTGGACCGGTCGATGGGCCAGGTCCGGCAGATGCTGACGCTGAAC
CGCGACATCGTCGTCTTGACCAACGCGACCGACTCGGCCGAGACGCGCATCTCGCTCGAGCGGACCGACCCCAAG
TGGCAGGAGTTTGTGCGGCGGCACGACGTCAAGATCGACAACCGGCCGCTCAAGTCCATCACACTGGTCCGCGCC
GGCGAGGCGGGCCGCGCCGACCCGGCCCTGCCGAGCGCGCCGGAGGACCGCCTGTTCCGCGTCGACTTCGCGCGC
GGCGAGCCCGTCTTCCGCAACGGCTTCCTCATCAGCACCGAGACGGAGCAGGCGTCCCCGCTCGGGCCGGAGCTG
GGCGTCGCCCTGTACGGAGGCCGGCTGGCGGCCGACGCGGCCCGCGGCCTCGAGACCAACGTCGCCGGCGTCTAC
GCCGTCGGCGACGCCAACGCCGACAACTCGACCAACGTGCCGCACGCGCTCTGGAGCGGCAAGCGCGCCGCCGTC
TCCGTCCACGGTGAGAGCGCCCCTCTCCCTTTCCTTCTACCCACCCCGCGAGGCGGCCGGCTGACGACGAGACAG
GCACACTGGCGCGCGAGGAATGGGACCGGGAGCTCGACGCCGCGCCGGGAGGCTACAGGAGGTTCCGAAGCCAGA
AGAGCGCGCAGCACGACGTCCGGGCCGTCTGGAGGATGATGAACGGCCGGGCCGGCGACCTGCTCCACGCCGGAG
ACTTTGACCGCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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