Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7171
Gene name
Location	Contig_400:19146..20003
Strand	-
Gene length (bp)	857
Transcript length (bp)	534
Coding sequence length (bp)	534
Protein length (aa)	178

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	4.7E-18	22	154

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P36136\|SHB17_YEAST	Sedoheptulose 1,7-bisphosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHB17 PE=1 SV=1	25	166	7.0E-33

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7171 LGIAGPLPWNAYGKGPRDGLACDARVEVTEDVREWDYGDYEGITSKEIRKIRADQGLTGTWDIWRDGCPGGESPD QVTQRLDRVIAEIREKWHQPAMSRGREEAAGESGDVLIVAHGHILRAFALRWAGKTLQEGPTFLLEAGGLGTLSY EHHSIEEPAILLGGAFHVDIDEQANQQ*
Coding	>Hirsu2\|7171 CTGGGCATTGCGGGACCCCTCCCATGGAACGCCTACGGCAAAGGCCCGCGTGACGGACTGGCGTGCGACGCCAGG GTCGAGGTTACCGAGGACGTTCGCGAGTGGGACTACGGCGACTACGAGGGCATCACGAGCAAGGAGATCCGGAAG ATACGGGCCGATCAGGGCCTCACGGGCACGTGGGACATTTGGCGCGATGGCTGTCCCGGTGGAGAGAGCCCCGAC CAGGTGACACAGAGACTGGACAGGGTCATTGCTGAGATTCGAGAGAAGTGGCACCAGCCGGCCATGAGCCGCGGC CGTGAAGAAGCGGCGGGCGAGAGCGGCGACGTGCTCATCGTCGCCCACGGCCACATCCTCCGCGCCTTTGCCCTG CGCTGGGCCGGCAAGACTCTGCAGGAGGGTCCGACCTTTCTCCTGGAAGCCGGAGGCCTCGGCACCCTGAGCTAC GAGCACCACAGTATAGAGGAGCCGGCCATTCTTCTCGGTGGCGCATTTCACGTTGATATTGACGAGCAGGCAAAT CAGCAGTGA
Transcript	>Hirsu2\|7171 CTGGGCATTGCGGGACCCCTCCCATGGAACGCCTACGGCAAAGGCCCGCGTGACGGACTGGCGTGCGACGCCAGG GTCGAGGTTACCGAGGACGTTCGCGAGTGGGACTACGGCGACTACGAGGGCATCACGAGCAAGGAGATCCGGAAG ATACGGGCCGATCAGGGCCTCACGGGCACGTGGGACATTTGGCGCGATGGCTGTCCCGGTGGAGAGAGCCCCGAC CAGGTGACACAGAGACTGGACAGGGTCATTGCTGAGATTCGAGAGAAGTGGCACCAGCCGGCCATGAGCCGCGGC CGTGAAGAAGCGGCGGGCGAGAGCGGCGACGTGCTCATCGTCGCCCACGGCCACATCCTCCGCGCCTTTGCCCTG CGCTGGGCCGGCAAGACTCTGCAGGAGGGTCCGACCTTTCTCCTGGAAGCCGGAGGCCTCGGCACCCTGAGCTAC GAGCACCACAGTATAGAGGAGCCGGCCATTCTTCTCGGTGGCGCATTTCACGTTGATATTGACGAGCAGGCAAAT CAGCAGTGA
Gene	>Hirsu2\|7171 CTGGGCATTGCGGGACCCCTCCCATGGAACGCCTACGGCAAAGGCCCGCGTGACGGACTGGCGTGCGACGCCAGG GTCGAGGTTACCGAGGACGTTCGCGAGTGGGACTACGGCGACTACGAGGGCATCACGAGCAAGGAGATCCGGAAG ATACGGGCCGATCAGGGCCTCACGGGCACGTGGGACATTTGGCGCGATGGCTGTCCCGGTGGAGAGTGAGTCAAC TGTCGGCCTGATAGGGTCTCTTACTGCCCCTTGATCNNCCCCCTTTTCCCCCCCCCCCCCCCTTTTTTTTTTCGT CTTACACGAAGATGACCTTGTCTTCCTTCATGTACTGGACACTGCACCTTGAGCCTCGACTCCGAAACGGCACGG TCCCGAGTTACAGAAAGGGTGGCGCCCAGGCTGACAGGAGCTGGACGAGAAAGGAGCCCCGACCAGGTGACACAG AGACTGGACAGGGTCATTGCTGAGATTCGAGAGAAGTGGCACCAGCCGGCCATGAGCCGCGGCCGTGAAGAAGCG GCGGGCGAGAGCGGCGACGTGCTCATCGTCGCCCACGGCCACATCCTCCGCGCCTTTGCCCTGCGCTGGGCCGGC AAGACTCTGCAGGAGGGTCCGACCTTTCTCCTGGAAGCCGGAGGCCTCGGCACCCTGAGGTGAGTTCTCGTCCAC TCGACGACCTGAAGATTACAGTGGGGGGCGCTTCAGGTTCTCGGACCCAGTCCCGAGTACGGGATGGAAGCTAAC CTTGGGGTGACGTCGCTAGCTACGAGCACCACAGTATAGAGGAGCCGGCCATTCTTCTCGGTGGCGCATTTCACG TTGATATTGACGAGCAGGCAAATCAGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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