Protein ID | Hirsu2|717 |
Gene name | |
Location | Contig_1146:7924..8524 |
Strand | + |
Gene length (bp) | 600 |
Transcript length (bp) | 600 |
Coding sequence length (bp) | 600 |
Protein length (aa) | 200 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.075 | 0.036 | 0.9587 | 0.0894 | 0.0984 | 0.0279 | 0.143 | 0.1135 | 0.105 | 0.0049 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.99948 |
Orthofinder run ID | 4 |
Orthogroup | 443 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|717 MKASIPLLAACAGLSLASPAGGRARPGNNVNIEDISRQLAKNVEGALSKVRESEYWRKKDAMFKKAMAEDDYRWW LAFQMEPVVEEIDCDRSRYDFQETYQPDCEDKCREHFINKVRYLGLIQINDPDLYGVWSYHLPPGACLPRRMCWL KRDWDRREDVLVYKTGAKRALILPWGGILGDLELIPGGFYVKGMRQQCV* |
Coding | >Hirsu2|717 ATGAAAGCCTCGATTCCGCTCCTTGCCGCATGCGCGGGTCTGAGTCTGGCGAGCCCGGCCGGGGGGCGGGCACGT CCCGGCAACAACGTCAATATCGAAGACATCAGCCGTCAACTCGCCAAGAACGTCGAGGGCGCGCTCAGCAAGGTA CGGGAGTCGGAGTACTGGCGGAAGAAGGACGCCATGTTCAAGAAGGCCATGGCCGAGGACGACTACCGCTGGTGG CTGGCCTTCCAGATGGAGCCGGTCGTGGAGGAGATCGACTGCGACCGGTCCCGGTACGACTTCCAGGAGACGTAC CAGCCGGACTGCGAGGACAAGTGCCGGGAGCACTTCATCAACAAGGTCCGGTACCTGGGCCTCATCCAGATCAAC GACCCGGACCTGTACGGCGTCTGGAGCTACCACCTCCCGCCGGGGGCCTGCCTGCCGCGGCGCATGTGCTGGCTC AAGCGCGACTGGGACCGTCGGGAGGACGTGCTGGTGTACAAGACGGGCGCCAAGAGGGCCCTGATCCTGCCCTGG GGCGGCATCCTCGGCGACCTCGAGCTGATTCCCGGCGGCTTCTACGTCAAGGGCATGCGTCAGCAGTGCGTCTGA |
Transcript | >Hirsu2|717 ATGAAAGCCTCGATTCCGCTCCTTGCCGCATGCGCGGGTCTGAGTCTGGCGAGCCCGGCCGGGGGGCGGGCACGT CCCGGCAACAACGTCAATATCGAAGACATCAGCCGTCAACTCGCCAAGAACGTCGAGGGCGCGCTCAGCAAGGTA CGGGAGTCGGAGTACTGGCGGAAGAAGGACGCCATGTTCAAGAAGGCCATGGCCGAGGACGACTACCGCTGGTGG CTGGCCTTCCAGATGGAGCCGGTCGTGGAGGAGATCGACTGCGACCGGTCCCGGTACGACTTCCAGGAGACGTAC CAGCCGGACTGCGAGGACAAGTGCCGGGAGCACTTCATCAACAAGGTCCGGTACCTGGGCCTCATCCAGATCAAC GACCCGGACCTGTACGGCGTCTGGAGCTACCACCTCCCGCCGGGGGCCTGCCTGCCGCGGCGCATGTGCTGGCTC AAGCGCGACTGGGACCGTCGGGAGGACGTGCTGGTGTACAAGACGGGCGCCAAGAGGGCCCTGATCCTGCCCTGG GGCGGCATCCTCGGCGACCTCGAGCTGATTCCCGGCGGCTTCTACGTCAAGGGCATGCGTCAGCAGTGCGTCTGA |
Gene | >Hirsu2|717 ATGAAAGCCTCGATTCCGCTCCTTGCCGCATGCGCGGGTCTGAGTCTGGCGAGCCCGGCCGGGGGGCGGGCACGT CCCGGCAACAACGTCAATATCGAAGACATCAGCCGTCAACTCGCCAAGAACGTCGAGGGCGCGCTCAGCAAGGTA CGGGAGTCGGAGTACTGGCGGAAGAAGGACGCCATGTTCAAGAAGGCCATGGCCGAGGACGACTACCGCTGGTGG CTGGCCTTCCAGATGGAGCCGGTCGTGGAGGAGATCGACTGCGACCGGTCCCGGTACGACTTCCAGGAGACGTAC CAGCCGGACTGCGAGGACAAGTGCCGGGAGCACTTCATCAACAAGGTCCGGTACCTGGGCCTCATCCAGATCAAC GACCCGGACCTGTACGGCGTCTGGAGCTACCACCTCCCGCCGGGGGCCTGCCTGCCGCGGCGCATGTGCTGGCTC AAGCGCGACTGGGACCGTCGGGAGGACGTGCTGGTGTACAAGACGGGCGCCAAGAGGGCCCTGATCCTGCCCTGG GGCGGCATCCTCGGCGACCTCGAGCTGATTCCCGGCGGCTTCTACGTCAAGGGCATGCGTCAGCAGTGCGTCTGA |