Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7167
Gene name
LocationContig_400:8625..9719
Strand-
Gene length (bp)1094
Transcript length (bp)1017
Coding sequence length (bp)1017
Protein length (aa) 339

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00445 Ribonuclease_T2 Ribonuclease T2 family 2.1E-11 188 297

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 195 327 3.0E-14
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 202 323 6.0E-11
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 195 330 2.0E-10
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 198 301 4.0E-10
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 195 330 2.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 195 327 3.0E-14
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 202 323 6.0E-11
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 195 330 2.0E-10
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 198 301 4.0E-10
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 195 330 2.0E-09
sp|P08056|RNRH_RHINI Ribonuclease Rh OS=Rhizopus niveus PE=1 SV=1 195 330 6.0E-07
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 195 327 2.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0033897 ribonuclease T2 activity Yes
GO:0016849 phosphorus-oxygen lyase activity No
GO:0003674 molecular_function No
GO:0140098 catalytic activity, acting on RNA No
GO:0003676 nucleic acid binding No
GO:0016787 hydrolase activity No
GO:0004518 nuclease activity No
GO:0004521 endoribonuclease activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004519 endonuclease activity No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0004540 ribonuclease activity No
GO:0140640 catalytic activity, acting on a nucleic acid No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1108 0.0528 0.954 0.0839 0.113 0.0317 0.2143 0.2582 0.1284 0.0056

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.976534

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6933
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5198
Ophiocordyceps subramaniannii Hirsu2|10538
Ophiocordyceps subramaniannii Hirsu2|7167 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7167
MMLLRALTPVIGFASLAQADTVHLRRNQTATSASKHIDVCNPQKEGHGRMVFTERWEPDSHSWVSERLWHAKSGG
SAPEEYCDKSRAYKNITAIIFYNNVKEMIRPWNRPFFLNETQYQDLLGNIKRVINDLNATELLAANVSADIFAKV
EYEKLFNKDNFEFARAMIDLYDPNAPIHVPVESLDTLKSQFGTAGGVERFMEEAWARDGTCVPALSLDCYENYAD
FEYGQEVVAYVERLATTSHQTYEKLEDAGIVPSEEKTYAMTKIEKAIKGNLAYARPTFVCESDVLIAIRYYYKVE
GHFDQSVFETADPESEESKACPANVRYLSRINAPTERL*
Coding >Hirsu2|7167
ATGATGCTGCTCCGCGCCTTGACACCTGTCATAGGCTTTGCCTCTCTCGCCCAGGCGGACACAGTTCACCTTCGC
AGAAACCAGACGGCCACGAGCGCGTCTAAGCATATCGATGTCTGCAACCCGCAAAAAGAGGGCCATGGGCGTATG
GTCTTCACGGAGCGTTGGGAGCCGGATTCCCACTCGTGGGTCAGCGAACGTCTCTGGCATGCTAAAAGCGGCGGC
TCGGCGCCCGAGGAATACTGCGATAAGAGCAGGGCATACAAAAATATCACGGCCATTATCTTCTACAACAACGTT
AAGGAAATGATACGTCCCTGGAACCGTCCCTTTTTTCTTAACGAGACCCAGTACCAGGATCTGCTAGGCAATATC
AAGCGCGTGATCAACGACCTCAATGCCACGGAACTGCTAGCCGCTAACGTTTCCGCCGACATCTTTGCCAAAGTT
GAGTATGAGAAGCTATTTAACAAGGATAACTTTGAGTTCGCCAGAGCCATGATCGACCTGTACGACCCGAACGCC
CCGATTCATGTTCCTGTTGAGTCGCTGGACACGCTCAAGAGCCAGTTCGGGACTGCCGGTGGCGTCGAGCGCTTT
ATGGAGGAGGCCTGGGCCAGAGATGGCACCTGCGTCCCCGCACTCAGCCTGGACTGCTATGAGAACTATGCCGAT
TTCGAGTACGGCCAGGAAGTCGTGGCCTACGTTGAACGGTTGGCTACCACTAGCCATCAGACATACGAGAAGCTC
GAAGATGCGGGAATCGTGCCGTCCGAGGAAAAGACGTATGCCATGACGAAAATCGAGAAAGCCATCAAGGGCAAC
TTAGCCTATGCTAGGCCTACGTTTGTCTGCGAAAGTGACGTTCTTATCGCGATCAGATACTACTATAAGGTCGAG
GGGCATTTCGACCAAAGTGTCTTTGAGACTGCTGATCCTGAGTCGGAGGAGTCCAAGGCTTGCCCCGCGAATGTC
CGGTACCTGTCAAGGATCAATGCCCCGACTGAAAGACTTTAG
Transcript >Hirsu2|7167
ATGATGCTGCTCCGCGCCTTGACACCTGTCATAGGCTTTGCCTCTCTCGCCCAGGCGGACACAGTTCACCTTCGC
AGAAACCAGACGGCCACGAGCGCGTCTAAGCATATCGATGTCTGCAACCCGCAAAAAGAGGGCCATGGGCGTATG
GTCTTCACGGAGCGTTGGGAGCCGGATTCCCACTCGTGGGTCAGCGAACGTCTCTGGCATGCTAAAAGCGGCGGC
TCGGCGCCCGAGGAATACTGCGATAAGAGCAGGGCATACAAAAATATCACGGCCATTATCTTCTACAACAACGTT
AAGGAAATGATACGTCCCTGGAACCGTCCCTTTTTTCTTAACGAGACCCAGTACCAGGATCTGCTAGGCAATATC
AAGCGCGTGATCAACGACCTCAATGCCACGGAACTGCTAGCCGCTAACGTTTCCGCCGACATCTTTGCCAAAGTT
GAGTATGAGAAGCTATTTAACAAGGATAACTTTGAGTTCGCCAGAGCCATGATCGACCTGTACGACCCGAACGCC
CCGATTCATGTTCCTGTTGAGTCGCTGGACACGCTCAAGAGCCAGTTCGGGACTGCCGGTGGCGTCGAGCGCTTT
ATGGAGGAGGCCTGGGCCAGAGATGGCACCTGCGTCCCCGCACTCAGCCTGGACTGCTATGAGAACTATGCCGAT
TTCGAGTACGGCCAGGAAGTCGTGGCCTACGTTGAACGGTTGGCTACCACTAGCCATCAGACATACGAGAAGCTC
GAAGATGCGGGAATCGTGCCGTCCGAGGAAAAGACGTATGCCATGACGAAAATCGAGAAAGCCATCAAGGGCAAC
TTAGCCTATGCTAGGCCTACGTTTGTCTGCGAAAGTGACGTTCTTATCGCGATCAGATACTACTATAAGGTCGAG
GGGCATTTCGACCAAAGTGTCTTTGAGACTGCTGATCCTGAGTCGGAGGAGTCCAAGGCTTGCCCCGCGAATGTC
CGGTACCTGTCAAGGATCAATGCCCCGACTGAAAGACTTTAG
Gene >Hirsu2|7167
ATGATGCTGCTCCGCGCCTTGACACCTGTCATAGGCTTTGCCTCTCTCGCCCAGGCGGACACAGTTCACCTTCGC
AGAAACCAGACGGCCACGAGCGCGTCTAAGCATATCGATGTCTGCAACCCGCAAAAAGAGGGCCATGGGCGTATG
GTCTTCACGGAGCGTTGGGAGCCGGATTCCCGTAAGTCAGCAAGCTTTCGCCACGCGAAGCAGGCTTCCAAGACA
GCTCTAAAGCTCACACACAACATGTTCACAAAGACTCGTGGGTCAGCGAACGTCTCTGGCATGCTAAAAGCGGCG
GCTCGGCGCCCGAGGAATACTGCGATAAGAGCAGGGCATACAAAAATATCACGGCCATTATCTTCTACAACAACG
TTAAGGAAATGATACGTCCCTGGAACCGTCCCTTTTTTCTTAACGAGACCCAGTACCAGGATCTGCTAGGCAATA
TCAAGCGCGTGATCAACGACCTCAATGCCACGGAACTGCTAGCCGCTAACGTTTCCGCCGACATCTTTGCCAAAG
TTGAGTATGAGAAGCTATTTAACAAGGATAACTTTGAGTTCGCCAGAGCCATGATCGACCTGTACGACCCGAACG
CCCCGATTCATGTTCCTGTTGAGTCGCTGGACACGCTCAAGAGCCAGTTCGGGACTGCCGGTGGCGTCGAGCGCT
TTATGGAGGAGGCCTGGGCCAGAGATGGCACCTGCGTCCCCGCACTCAGCCTGGACTGCTATGAGAACTATGCCG
ATTTCGAGTACGGCCAGGAAGTCGTGGCCTACGTTGAACGGTTGGCTACCACTAGCCATCAGACATACGAGAAGC
TCGAAGATGCGGGAATCGTGCCGTCCGAGGAAAAGACGTATGCCATGACGAAAATCGAGAAAGCCATCAAGGGCA
ACTTAGCCTATGCTAGGCCTACGTTTGTCTGCGAAAGTGACGTTCTTATCGCGATCAGATACTACTATAAGGTCG
AGGGGCATTTCGACCAAAGTGTCTTTGAGACTGCTGATCCTGAGTCGGAGGAGTCCAAGGCTTGCCCCGCGAATG
TCCGGTACCTGTCAAGGATCAATGCCCCGACTGAAAGACTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail