Protein ID | Hirsu2|7162 |
Gene name | |
Location | Contig_40:49816..51205 |
Strand | - |
Gene length (bp) | 1389 |
Transcript length (bp) | 1287 |
Coding sequence length (bp) | 1287 |
Protein length (aa) | 429 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Endoplasmic reticulum | Signal peptide | 0.1777 | 0.1757 | 0.8035 | 0.1446 | 0.2084 | 0.0673 | 0.6709 | 0.4606 | 0.5335 | 0.006 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7106 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|7162 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7162 MALHGHLGGFKTTILILACSILFGFSWASRSYNPPTPLSSLSSKPTDDDGGSTQDVGAYEGYAATTAKDDDDLRA KDEHGHPRGSRSASIPVGGGGGEEIAVYETNTSSTRHIQHVFIVLHGKRRDGGRYWTIMDEAVRSARSQDVAGAD RHTLVVAPRFFSALFDDGLYTGRQLAWADLNAWQAGMRASHPPGTRQTAIDALSALVEAYSNRAAYPSVANVTVV GHGGGGQLAQRFAAVAKEPPPHVHVRYIHGDPSTSAYFTPDRPAKGEELASCPSYNVWRYGFDSFDSATGEEGTP REYFSRYISRDVVSLVGLEDVEANGDQSCMARVQGGERRRDRNLAWYKYVNVLAGTDRDLRGFPGHFGPLPDWSE LSNRTINMRLIVVQNASHDGERLFESPDGRSALFYDGRLQRGWRPSRDRVYHG* |
Coding | >Hirsu2|7162 ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGCA AAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCCGTCGGCGGTGGCGGCGGCGAGGAAATC GCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTCTTCATCGTGCTCCATGGCAAGCGCCGC GACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCCCGCAGCCAGGACGTGGCCGGGGCGGAC CGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGACGACGGCCTGTACACCGGCCGACAGCTC GCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCACCCACCGGGCACGCGGCAGACGGCCATC GACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTACCCCAGCGTCGCCAACGTCACCGTCGTC GGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCCAAGGAGCCGCCGCCTCACGTCCATGTC CGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGACCGGCCGGCCAAGGGGGAGGAGCTGGCC TCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGACAGCGCGACGGGCGAGGAGGGGACGCCG CGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTCGGCCTCGAGGACGTCGAGGCCAACGGG GACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGACCGCAACCTGGCCTGGTATAAATACGTC AACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCACTTCGGCCCTCTGCCAGACTGGTCTGAG CTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCCAGCCACGACGGCGAGCGGCTGTTCGAG AGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGAGGCTGGAGACCGTCCCGAGACCGTGTC TATCATGGGTGA |
Transcript | >Hirsu2|7162 ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGCA AAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCCGTCGGCGGTGGCGGCGGCGAGGAAATC GCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTCTTCATCGTGCTCCATGGCAAGCGCCGC GACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCCCGCAGCCAGGACGTGGCCGGGGCGGAC CGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGACGACGGCCTGTACACCGGCCGACAGCTC GCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCACCCACCGGGCACGCGGCAGACGGCCATC GACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTACCCCAGCGTCGCCAACGTCACCGTCGTC GGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCCAAGGAGCCGCCGCCTCACGTCCATGTC CGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGACCGGCCGGCCAAGGGGGAGGAGCTGGCC TCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGACAGCGCGACGGGCGAGGAGGGGACGCCG CGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTCGGCCTCGAGGACGTCGAGGCCAACGGG GACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGACCGCAACCTGGCCTGGTATAAATACGTC AACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCACTTCGGCCCTCTGCCAGACTGGTCTGAG CTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCCAGCCACGACGGCGAGCGGCTGTTCGAG AGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGAGGCTGGAGACCGTCCCGAGACCGTGTC TATCATGGGTGA |
Gene | >Hirsu2|7162 ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGTA AGTCGAACCACACAGGCACAGAAGGGGGAACAAGCGTGTCGGTTGCAGTCGTTTACTCTCTCCCTTCCACTCTCG TGTCTGCCCGCCGCGCGTACATAGGCAAAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCC GTCGGCGGTGGCGGCGGCGAGGAAATCGCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTC TTCATCGTGCTCCATGGCAAGCGCCGCGACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCC CGCAGCCAGGACGTGGCCGGGGCGGACCGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGAC GACGGCCTGTACACCGGCCGACAGCTCGCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCAC CCACCGGGCACGCGGCAGACGGCCATCGACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTAC CCCAGCGTCGCCAACGTCACCGTCGTCGGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCC AAGGAGCCGCCGCCTCACGTCCATGTCCGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGAC CGGCCGGCCAAGGGGGAGGAGCTGGCCTCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGAC AGCGCGACGGGCGAGGAGGGGACGCCGCGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTC GGCCTCGAGGACGTCGAGGCCAACGGGGACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGAC CGCAACCTGGCCTGGTATAAATACGTCAACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCAC TTCGGCCCTCTGCCAGACTGGTCTGAGCTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCC AGCCACGACGGCGAGCGGCTGTTCGAGAGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGA GGCTGGAGACCGTCCCGAGACCGTGTCTATCATGGGTGA |