Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7162
Gene name
LocationContig_40:49816..51205
Strand-
Gene length (bp)1389
Transcript length (bp)1287
Coding sequence length (bp)1287
Protein length (aa) 429

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Endoplasmic reticulum Signal peptide 0.1777 0.1757 0.8035 0.1446 0.2084 0.0673 0.6709 0.4606 0.5335 0.006

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7106
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7162 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7162
MALHGHLGGFKTTILILACSILFGFSWASRSYNPPTPLSSLSSKPTDDDGGSTQDVGAYEGYAATTAKDDDDLRA
KDEHGHPRGSRSASIPVGGGGGEEIAVYETNTSSTRHIQHVFIVLHGKRRDGGRYWTIMDEAVRSARSQDVAGAD
RHTLVVAPRFFSALFDDGLYTGRQLAWADLNAWQAGMRASHPPGTRQTAIDALSALVEAYSNRAAYPSVANVTVV
GHGGGGQLAQRFAAVAKEPPPHVHVRYIHGDPSTSAYFTPDRPAKGEELASCPSYNVWRYGFDSFDSATGEEGTP
REYFSRYISRDVVSLVGLEDVEANGDQSCMARVQGGERRRDRNLAWYKYVNVLAGTDRDLRGFPGHFGPLPDWSE
LSNRTINMRLIVVQNASHDGERLFESPDGRSALFYDGRLQRGWRPSRDRVYHG*
Coding >Hirsu2|7162
ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC
TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC
GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGCA
AAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCCGTCGGCGGTGGCGGCGGCGAGGAAATC
GCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTCTTCATCGTGCTCCATGGCAAGCGCCGC
GACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCCCGCAGCCAGGACGTGGCCGGGGCGGAC
CGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGACGACGGCCTGTACACCGGCCGACAGCTC
GCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCACCCACCGGGCACGCGGCAGACGGCCATC
GACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTACCCCAGCGTCGCCAACGTCACCGTCGTC
GGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCCAAGGAGCCGCCGCCTCACGTCCATGTC
CGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGACCGGCCGGCCAAGGGGGAGGAGCTGGCC
TCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGACAGCGCGACGGGCGAGGAGGGGACGCCG
CGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTCGGCCTCGAGGACGTCGAGGCCAACGGG
GACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGACCGCAACCTGGCCTGGTATAAATACGTC
AACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCACTTCGGCCCTCTGCCAGACTGGTCTGAG
CTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCCAGCCACGACGGCGAGCGGCTGTTCGAG
AGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGAGGCTGGAGACCGTCCCGAGACCGTGTC
TATCATGGGTGA
Transcript >Hirsu2|7162
ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC
TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC
GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGCA
AAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCCGTCGGCGGTGGCGGCGGCGAGGAAATC
GCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTCTTCATCGTGCTCCATGGCAAGCGCCGC
GACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCCCGCAGCCAGGACGTGGCCGGGGCGGAC
CGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGACGACGGCCTGTACACCGGCCGACAGCTC
GCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCACCCACCGGGCACGCGGCAGACGGCCATC
GACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTACCCCAGCGTCGCCAACGTCACCGTCGTC
GGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCCAAGGAGCCGCCGCCTCACGTCCATGTC
CGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGACCGGCCGGCCAAGGGGGAGGAGCTGGCC
TCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGACAGCGCGACGGGCGAGGAGGGGACGCCG
CGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTCGGCCTCGAGGACGTCGAGGCCAACGGG
GACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGACCGCAACCTGGCCTGGTATAAATACGTC
AACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCACTTCGGCCCTCTGCCAGACTGGTCTGAG
CTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCCAGCCACGACGGCGAGCGGCTGTTCGAG
AGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGAGGCTGGAGACCGTCCCGAGACCGTGTC
TATCATGGGTGA
Gene >Hirsu2|7162
ATGGCCCTTCATGGCCACCTCGGCGGTTTCAAGACCACGATCCTGATTCTGGCCTGCTCCATCTTGTTTGGTTTC
TCTTGGGCCAGCCGCAGCTACAATCCTCCAACTCCGCTCTCATCGCTTTCGTCCAAACCGACCGACGATGACGGC
GGATCGACTCAGGATGTAGGCGCCTACGAAGGCTATGCCGCCACAACCGCCAAAGACGACGACGACCTCAGGGTA
AGTCGAACCACACAGGCACAGAAGGGGGAACAAGCGTGTCGGTTGCAGTCGTTTACTCTCTCCCTTCCACTCTCG
TGTCTGCCCGCCGCGCGTACATAGGCAAAGGATGAACACGGGCACCCCAGGGGCTCGCGGTCTGCTTCCATCCCC
GTCGGCGGTGGCGGCGGCGAGGAAATCGCCGTCTACGAAACAAACACGTCGTCGACCCGGCACATCCAGCACGTC
TTCATCGTGCTCCATGGCAAGCGCCGCGACGGAGGCCGGTACTGGACCATAATGGACGAGGCCGTCCGAAGCGCC
CGCAGCCAGGACGTGGCCGGGGCGGACCGGCACACCCTCGTCGTCGCCCCGCGCTTCTTCTCCGCCCTGTTCGAC
GACGGCCTGTACACCGGCCGACAGCTCGCCTGGGCCGACCTCAACGCCTGGCAGGCCGGGATGCGGGCCAGCCAC
CCACCGGGCACGCGGCAGACGGCCATCGACGCCCTGAGCGCCCTGGTCGAGGCCTACTCGAACCGCGCGGCCTAC
CCCAGCGTCGCCAACGTCACCGTCGTCGGCCACGGCGGAGGCGGCCAGCTGGCCCAGCGGTTCGCGGCCGTGGCC
AAGGAGCCGCCGCCTCACGTCCATGTCCGCTACATCCACGGCGACCCGTCCACCTCGGCCTACTTCACCCCCGAC
CGGCCGGCCAAGGGGGAGGAGCTGGCCTCGTGTCCGTCCTACAACGTCTGGCGCTACGGCTTCGACAGCTTTGAC
AGCGCGACGGGCGAGGAGGGGACGCCGCGCGAGTACTTCAGCCGCTACATCAGCCGCGACGTCGTCTCGCTCGTC
GGCCTCGAGGACGTCGAGGCCAACGGGGACCAGTCGTGCATGGCCCGGGTGCAGGGCGGCGAGAGGCGGCGCGAC
CGCAACCTGGCCTGGTATAAATACGTCAACGTGCTGGCTGGCACCGACAGAGACCTGCGCGGCTTCCCGGGCCAC
TTCGGCCCTCTGCCAGACTGGTCTGAGCTCTCCAACCGCACCATCAACATGCGCCTGATCGTCGTCCAGAACGCC
AGCCACGACGGCGAGCGGCTGTTCGAGAGCCCCGACGGTCGGTCGGCACTCTTCTACGACGGCCGTCTCCAGCGA
GGCTGGAGACCGTCCCGAGACCGTGTCTATCATGGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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