© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7149 |
| Gene name | |
| Location | Contig_40:13146..15066 |
| Strand | - |
| Gene length (bp) | 1920 |
| Transcript length (bp) | 1815 |
| Coding sequence length (bp) | 1815 |
| Protein length (aa) | 605 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.3E-25 | 129 | 269 |
| PF08031 | BBE | Berberine and berberine like | 1.8E-08 | 513 | 547 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 36 | 571 | 5.0E-88 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 37 | 559 | 1.0E-65 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 129 | 333 | 9.0E-18 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 160 | 311 | 4.0E-09 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 160 | 311 | 4.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 36 | 571 | 5.0E-88 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 37 | 559 | 1.0E-65 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 129 | 333 | 9.0E-18 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 160 | 311 | 4.0E-09 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 160 | 311 | 4.0E-09 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 241 | 309 | 7.0E-08 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 137 | 298 | 2.0E-07 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 130 | 376 | 3.0E-07 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 242 | 550 | 5.0E-07 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 124 | 550 | 7.0E-07 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 241 | 309 | 1.0E-06 |
| sp|Q8LNV6|CKX3_ORYSJ | Cytokinin dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CKX3 PE=2 SV=1 | 200 | 297 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7149 MIFYSTAAALALAGSVLAKAYGSPGPVGDGSSSSSCKCFPGDDCWPGPAEWARLNETVHGRLVATVPLGSPCHDP NYDEGACLALRRRWSYPSIHTASSSSVMAPLFSNLSCDPFQPRDSPCLLGNYVRYAVEARCAEDIIDTLRFADEH NVRFVIRNTGHDFQGRSTGAGALSVWTHRLKDMELLDWADKRYTGKALKVGAGVVTFEALEFAQKAGLVVITGQC FSVGLAGGYIQGGGHSALSSRYGLAADNALSYEVVTPSGRLVTASPSEHPDLYWALSGGGGGNFGVVVSATVKAH PDARVAGASWDVGLPEGNEDALLEAVDAFHASLPKLIESGIMVVYSFGRKFVKGISMTAYNMTKAEAQQALQPFS EAVGSLGLRLTANFTEFRNYYEHLSHYFGPAPDGNIMVGVALYGGRLIPRQALARFAPTARRLVGLDATFIGVGL DVSRFGSRMANAVLPQWREATVHAAVSRPWTPGAPLEQMQAEQDRITRVIQPVLEAATPGSGAYMNEADFQQPDF QDVFFGANYPRLLRIKRKYDGRGLLYATAGVGSEDWDVHRDGRMCRRRSRSGKEDDTYGPGERHDARPRGSDWVP STSR* |
| Coding | >Hirsu2|7149 ATGATCTTCTACTCGACAGCCGCCGCGCTGGCACTTGCCGGCTCCGTCCTCGCCAAGGCTTACGGGTCGCCCGGG CCCGTCGGCGACGGCAGCAGCAGCAGCAGCTGTAAATGTTTTCCCGGAGACGACTGCTGGCCAGGCCCGGCCGAG TGGGCGCGGCTCAACGAGACGGTCCACGGCCGGCTCGTGGCGACGGTGCCACTCGGGTCTCCCTGCCACGACCCC AACTACGACGAGGGCGCCTGCTTGGCCCTCCGCCGGCGGTGGTCATACCCGTCTATCCACACTGCGTCTTCTTCC TCGGTCATGGCGCCTCTGTTCTCCAACCTGAGCTGCGATCCCTTCCAGCCCCGGGACTCGCCTTGCCTGTTGGGC AACTACGTGAGATACGCCGTCGAGGCCCGCTGCGCAGAGGACATTATTGATACCCTAAGGTTCGCCGATGAACAT AACGTTCGCTTTGTGATCCGCAATACCGGCCATGACTTTCAAGGCCGGTCTACGGGCGCCGGAGCCCTCTCGGTA TGGACCCATCGCCTGAAGGATATGGAGCTTCTGGACTGGGCCGACAAGCGCTATACGGGCAAAGCCCTCAAAGTA GGCGCCGGCGTGGTGACGTTCGAGGCTCTGGAGTTTGCCCAAAAGGCCGGCCTAGTCGTGATCACGGGCCAGTGC TTCTCTGTTGGCCTTGCGGGAGGCTATATACAAGGCGGCGGCCACTCGGCCTTGAGTAGCAGGTACGGCTTGGCG GCCGACAACGCGCTGAGTTACGAAGTGGTGACGCCCTCGGGGCGTCTTGTCACCGCATCGCCATCCGAGCACCCT GACCTATACTGGGCCCTAAGCGGCGGAGGAGGCGGCAATTTCGGCGTCGTCGTCTCCGCCACAGTCAAGGCCCAT CCCGACGCCCGCGTGGCCGGCGCGTCCTGGGATGTCGGGCTTCCGGAAGGGAACGAGGATGCGCTGCTCGAGGCC GTCGATGCCTTCCACGCCTCGCTGCCGAAGCTGATCGAATCCGGGATCATGGTCGTCTACTCGTTTGGCCGCAAG TTCGTCAAGGGCATCAGCATGACGGCCTACAACATGACCAAGGCCGAGGCGCAACAGGCTCTGCAGCCGTTCAGC GAAGCCGTCGGATCGCTGGGCCTCCGCCTGACGGCCAACTTTACCGAGTTCCGCAACTACTACGAGCATCTCAGC CACTACTTCGGGCCCGCGCCCGACGGCAACATAATGGTCGGCGTGGCGCTGTACGGCGGGCGCCTGATTCCACGA CAGGCCCTGGCCCGCTTCGCGCCGACGGCGCGCAGGCTGGTCGGGCTGGATGCGACCTTCATCGGGGTCGGTCTC GACGTGTCCCGTTTCGGGTCCAGGATGGCCAACGCGGTGCTGCCCCAGTGGCGCGAAGCCACGGTACACGCGGCC GTGTCCCGCCCGTGGACACCGGGGGCGCCCCTGGAGCAGATGCAGGCTGAGCAAGACAGGATCACGAGGGTGATT CAGCCGGTGCTGGAGGCGGCCACACCCGGCTCGGGCGCGTACATGAACGAGGCTGACTTCCAGCAGCCCGACTTC CAAGACGTCTTTTTCGGGGCAAACTACCCGAGGCTGCTGAGGATCAAGAGGAAATACGACGGGCGCGGGCTCCTG TACGCGACGGCCGGCGTGGGGAGCGAGGACTGGGACGTGCATAGGGATGGGCGGATGTGCCGCCGACGATCCAGA TCCGGCAAAGAGGACGACACGTACGGCCCGGGCGAGAGACATGACGCGAGGCCCCGGGGCTCCGATTGGGTGCCG TCGACGAGCAGATAG |
| Transcript | >Hirsu2|7149 ATGATCTTCTACTCGACAGCCGCCGCGCTGGCACTTGCCGGCTCCGTCCTCGCCAAGGCTTACGGGTCGCCCGGG CCCGTCGGCGACGGCAGCAGCAGCAGCAGCTGTAAATGTTTTCCCGGAGACGACTGCTGGCCAGGCCCGGCCGAG TGGGCGCGGCTCAACGAGACGGTCCACGGCCGGCTCGTGGCGACGGTGCCACTCGGGTCTCCCTGCCACGACCCC AACTACGACGAGGGCGCCTGCTTGGCCCTCCGCCGGCGGTGGTCATACCCGTCTATCCACACTGCGTCTTCTTCC TCGGTCATGGCGCCTCTGTTCTCCAACCTGAGCTGCGATCCCTTCCAGCCCCGGGACTCGCCTTGCCTGTTGGGC AACTACGTGAGATACGCCGTCGAGGCCCGCTGCGCAGAGGACATTATTGATACCCTAAGGTTCGCCGATGAACAT AACGTTCGCTTTGTGATCCGCAATACCGGCCATGACTTTCAAGGCCGGTCTACGGGCGCCGGAGCCCTCTCGGTA TGGACCCATCGCCTGAAGGATATGGAGCTTCTGGACTGGGCCGACAAGCGCTATACGGGCAAAGCCCTCAAAGTA GGCGCCGGCGTGGTGACGTTCGAGGCTCTGGAGTTTGCCCAAAAGGCCGGCCTAGTCGTGATCACGGGCCAGTGC TTCTCTGTTGGCCTTGCGGGAGGCTATATACAAGGCGGCGGCCACTCGGCCTTGAGTAGCAGGTACGGCTTGGCG GCCGACAACGCGCTGAGTTACGAAGTGGTGACGCCCTCGGGGCGTCTTGTCACCGCATCGCCATCCGAGCACCCT GACCTATACTGGGCCCTAAGCGGCGGAGGAGGCGGCAATTTCGGCGTCGTCGTCTCCGCCACAGTCAAGGCCCAT CCCGACGCCCGCGTGGCCGGCGCGTCCTGGGATGTCGGGCTTCCGGAAGGGAACGAGGATGCGCTGCTCGAGGCC GTCGATGCCTTCCACGCCTCGCTGCCGAAGCTGATCGAATCCGGGATCATGGTCGTCTACTCGTTTGGCCGCAAG TTCGTCAAGGGCATCAGCATGACGGCCTACAACATGACCAAGGCCGAGGCGCAACAGGCTCTGCAGCCGTTCAGC GAAGCCGTCGGATCGCTGGGCCTCCGCCTGACGGCCAACTTTACCGAGTTCCGCAACTACTACGAGCATCTCAGC CACTACTTCGGGCCCGCGCCCGACGGCAACATAATGGTCGGCGTGGCGCTGTACGGCGGGCGCCTGATTCCACGA CAGGCCCTGGCCCGCTTCGCGCCGACGGCGCGCAGGCTGGTCGGGCTGGATGCGACCTTCATCGGGGTCGGTCTC GACGTGTCCCGTTTCGGGTCCAGGATGGCCAACGCGGTGCTGCCCCAGTGGCGCGAAGCCACGGTACACGCGGCC GTGTCCCGCCCGTGGACACCGGGGGCGCCCCTGGAGCAGATGCAGGCTGAGCAAGACAGGATCACGAGGGTGATT CAGCCGGTGCTGGAGGCGGCCACACCCGGCTCGGGCGCGTACATGAACGAGGCTGACTTCCAGCAGCCCGACTTC CAAGACGTCTTTTTCGGGGCAAACTACCCGAGGCTGCTGAGGATCAAGAGGAAATACGACGGGCGCGGGCTCCTG TACGCGACGGCCGGCGTGGGGAGCGAGGACTGGGACGTGCATAGGGATGGGCGGATGTGCCGCCGACGATCCAGA TCCGGCAAAGAGGACGACACGTACGGCCCGGGCGAGAGACATGACGCGAGGCCCCGGGGCTCCGATTGGGTGCCG TCGACGAGCAGATAG |
| Gene | >Hirsu2|7149 ATGATCTTCTACTCGACAGCCGCCGCGCTGGCACTTGCCGGCTCCGTCCTCGCCAAGGCTTACGGGTCGCCCGGG CCCGTCGGCGACGGCAGCAGCAGCAGCAGCTGTAAATGTTTTCCCGGAGACGACTGCTGGCCAGGCCCGGCCGAG TGGGCGCGGCTCAACGAGACGGTCCACGGCCGGCTCGTGGCGACGGTGCCACTCGGGTCTCCCTGCCACGACCCC AACTACGACGAGGGCGCCTGCTTGGCCCTCCGCCGGCGGTGGTCATACCCGTCTATCCAGTGAGTTTCGGATGCA ACCCTTCTGCCCTTTTTGGCGGAGGGGAACTCGCCGAAAGACAGGCTTCCGGAAGGGCCAGGTGGGCTGACACGG AGGTTTCCCGTCAGCACTGCGTCTTCTTCCTCGGTCATGGCGCCTCTGTTCTCCAACCTGAGCTGCGATCCCTTC CAGCCCCGGGACTCGCCTTGCCTGTTGGGCAACTACGTGAGATACGCCGTCGAGGCCCGCTGCGCAGAGGACATT ATTGATACCCTAAGGTTCGCCGATGAACATAACGTTCGCTTTGTGATCCGCAATACCGGCCATGACTTTCAAGGC CGGTCTACGGGCGCCGGAGCCCTCTCGGTATGGACCCATCGCCTGAAGGATATGGAGCTTCTGGACTGGGCCGAC AAGCGCTATACGGGCAAAGCCCTCAAAGTAGGCGCCGGCGTGGTGACGTTCGAGGCTCTGGAGTTTGCCCAAAAG GCCGGCCTAGTCGTGATCACGGGCCAGTGCTTCTCTGTTGGCCTTGCGGGAGGCTATATACAAGGCGGCGGCCAC TCGGCCTTGAGTAGCAGGTACGGCTTGGCGGCCGACAACGCGCTGAGTTACGAAGTGGTGACGCCCTCGGGGCGT CTTGTCACCGCATCGCCATCCGAGCACCCTGACCTATACTGGGCCCTAAGCGGCGGAGGAGGCGGCAATTTCGGC GTCGTCGTCTCCGCCACAGTCAAGGCCCATCCCGACGCCCGCGTGGCCGGCGCGTCCTGGGATGTCGGGCTTCCG GAAGGGAACGAGGATGCGCTGCTCGAGGCCGTCGATGCCTTCCACGCCTCGCTGCCGAAGCTGATCGAATCCGGG ATCATGGTCGTCTACTCGTTTGGCCGCAAGTTCGTCAAGGGCATCAGCATGACGGCCTACAACATGACCAAGGCC GAGGCGCAACAGGCTCTGCAGCCGTTCAGCGAAGCCGTCGGATCGCTGGGCCTCCGCCTGACGGCCAACTTTACC GAGTTCCGCAACTACTACGAGCATCTCAGCCACTACTTCGGGCCCGCGCCCGACGGCAACATAATGGTCGGCGTG GCGCTGTACGGCGGGCGCCTGATTCCACGACAGGCCCTGGCCCGCTTCGCGCCGACGGCGCGCAGGCTGGTCGGG CTGGATGCGACCTTCATCGGGGTCGGTCTCGACGTGTCCCGTTTCGGGTCCAGGATGGCCAACGCGGTGCTGCCC CAGTGGCGCGAAGCCACGGTACACGCGGCCGTGTCCCGCCCGTGGACACCGGGGGCGCCCCTGGAGCAGATGCAG GCTGAGCAAGACAGGATCACGAGGGTGATTCAGCCGGTGCTGGAGGCGGCCACACCCGGCTCGGGCGCGTACATG AACGAGGCTGACTTCCAGCAGCCCGACTTCCAAGACGTCTTTTTCGGGGCAAACTACCCGAGGCTGCTGAGGATC AAGAGGAAATACGACGGGCGCGGGCTCCTGTACGCGACGGCCGGCGTGGGGAGCGAGGACTGGGACGTGCATAGG GATGGGCGGATGTGCCGCCGACGATCCAGATCCGGCAAAGAGGACGACACGTACGGCCCGGGCGAGAGACATGAC GCGAGGCCCCGGGGCTCCGATTGGGTGCCGTCGACGAGCAGATAG |