Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7128
Gene name
Location	Contig_4:42954..44139
Strand	+
Gene length (bp)	1185
Transcript length (bp)	1008
Coding sequence length (bp)	1008
Protein length (aa)	336

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04488	Gly_transf_sug	Glycosyltransferase sugar-binding region containing DXD motif	2.5E-15	98	179

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P33300\|SUR1_YEAST	Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1	45	304	8.0E-51
sp\|P38287\|CSH1_YEAST	Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1	12	304	4.0E-50
sp\|Q9UT67\|IMT2_SCHPO	Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1	31	325	1.0E-49
sp\|Q10323\|IMT3_SCHPO	Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1	72	328	1.0E-43
sp\|O14084\|IMT1_SCHPO	Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2	59	291	5.0E-28

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P33300\|SUR1_YEAST	Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1	45	304	8.0E-51
sp\|P38287\|CSH1_YEAST	Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1	12	304	4.0E-50
sp\|Q9UT67\|IMT2_SCHPO	Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1	31	325	1.0E-49
sp\|Q10323\|IMT3_SCHPO	Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1	72	328	1.0E-43
sp\|O14084\|IMT1_SCHPO	Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2	59	291	5.0E-28
sp\|Q5UQW4\|YL373_MIMIV	Uncharacterized glycosyltransferase L373 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L373 PE=3 SV=1	78	257	1.0E-16

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	12	34	22
2	299	318	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7128 MASAHSRVRRLVVGLAGLGLLLLVASFLSHVIVAANRIFGRHAGIALTQEQIALAYRSTASSAPSSSSTSSSRRP RPVPRIIHQIFHNWKDPGNETMPADWHDMRQSCIALHPTWEHKLWREDASRAFIQTEYPWFLDTYDNFRFPVQRV DALRYFLLRHFGGIYMDLDNGCRANLEPLLYYPAWVTDGGQGALSNNILGAEPEHPFWILMTDSIKAWAGDFVLP YITISYATGQWYETDMWQIYHASKPASDPDLLRVMMDMRPTGAPWVFFTAGRGGTWDNWDNQVLGWFGNHLFEAA LYAFAALGLAFALAFALGRTLRRRRSRRGADELKL*
Coding	>Hirsu2\|7128 ATGGCCTCTGCACACTCCCGGGTTCGACGGCTCGTCGTTGGCCTGGCCGGCCTCGGCCTACTGCTGCTTGTCGCC AGCTTCCTCTCGCACGTCATCGTCGCCGCCAACCGCATCTTCGGCCGCCATGCCGGCATTGCCCTGACCCAGGAG CAAATCGCGCTCGCCTACCGCAGCACCGCCTCGTCCGCCCCCTCTTCCTCCTCCACTTCCTCGTCGCGACGACCC AGGCCCGTGCCGCGCATCATCCACCAGATATTCCACAACTGGAAAGACCCAGGCAACGAGACGATGCCGGCCGAC TGGCACGACATGCGCCAGTCCTGTATCGCCTTGCACCCCACCTGGGAGCACAAGCTCTGGCGTGAGGATGCCTCG CGCGCCTTCATCCAGACCGAATATCCCTGGTTTCTCGACACGTACGATAACTTCCGCTTCCCCGTCCAGAGAGTC GACGCCTTGCGATACTTTCTACTCAGGCACTTTGGCGGCATCTACATGGACCTTGACAATGGCTGTCGAGCCAAT CTCGAGCCGCTCCTCTACTACCCGGCCTGGGTTACCGACGGCGGCCAGGGCGCCCTCAGCAATAACATTCTCGGC GCCGAGCCCGAGCACCCCTTCTGGATCCTCATGACCGACTCCATCAAGGCCTGGGCCGGCGACTTCGTCCTGCCC TACATCACCATCAGCTACGCCACCGGACAGTGGTACGAGACAGACATGTGGCAAATCTACCACGCCAGCAAGCCC GCCAGCGACCCGGACCTGCTGCGCGTCATGATGGACATGCGCCCGACCGGCGCCCCCTGGGTCTTCTTCACCGCC GGCCGCGGCGGCACCTGGGACAACTGGGACAACCAAGTCCTCGGCTGGTTCGGCAACCACCTGTTCGAGGCCGCC CTGTACGCCTTCGCCGCCCTCGGCCTCGCCTTTGCCCTAGCCTTTGCCCTTGGCCGCACCCTGAGGCGCCGGCGG AGCCGCAGGGGCGCAGACGAGCTGAAGCTGTAA
Transcript	>Hirsu2\|7128 ATGGCCTCTGCACACTCCCGGGTTCGACGGCTCGTCGTTGGCCTGGCCGGCCTCGGCCTACTGCTGCTTGTCGCC AGCTTCCTCTCGCACGTCATCGTCGCCGCCAACCGCATCTTCGGCCGCCATGCCGGCATTGCCCTGACCCAGGAG CAAATCGCGCTCGCCTACCGCAGCACCGCCTCGTCCGCCCCCTCTTCCTCCTCCACTTCCTCGTCGCGACGACCC AGGCCCGTGCCGCGCATCATCCACCAGATATTCCACAACTGGAAAGACCCAGGCAACGAGACGATGCCGGCCGAC TGGCACGACATGCGCCAGTCCTGTATCGCCTTGCACCCCACCTGGGAGCACAAGCTCTGGCGTGAGGATGCCTCG CGCGCCTTCATCCAGACCGAATATCCCTGGTTTCTCGACACGTACGATAACTTCCGCTTCCCCGTCCAGAGAGTC GACGCCTTGCGATACTTTCTACTCAGGCACTTTGGCGGCATCTACATGGACCTTGACAATGGCTGTCGAGCCAAT CTCGAGCCGCTCCTCTACTACCCGGCCTGGGTTACCGACGGCGGCCAGGGCGCCCTCAGCAATAACATTCTCGGC GCCGAGCCCGAGCACCCCTTCTGGATCCTCATGACCGACTCCATCAAGGCCTGGGCCGGCGACTTCGTCCTGCCC TACATCACCATCAGCTACGCCACCGGACAGTGGTACGAGACAGACATGTGGCAAATCTACCACGCCAGCAAGCCC GCCAGCGACCCGGACCTGCTGCGCGTCATGATGGACATGCGCCCGACCGGCGCCCCCTGGGTCTTCTTCACCGCC GGCCGCGGCGGCACCTGGGACAACTGGGACAACCAAGTCCTCGGCTGGTTCGGCAACCACCTGTTCGAGGCCGCC CTGTACGCCTTCGCCGCCCTCGGCCTCGCCTTTGCCCTAGCCTTTGCCCTTGGCCGCACCCTGAGGCGCCGGCGG AGCCGCAGGGGCGCAGACGAGCTGAAGCTGTAA
Gene	>Hirsu2\|7128 ATGGCCTCTGCACACTCCCGGGTTCGACGGCTCGTCGTTGGCCTGGCCGGCCTCGGCCTACTGCTGCTTGTCGCC AGCTTCCTCTCGCACGTCATCGTCGCCGCCAACCGCATCTTCGGCCGCCATGCCGGCATTGCCCTGACCCAGGAG CAAATCGCGCTCGCCTACCGCAGCACCGCCTCGTCCGCCCCCTCTTCCTCCTCCACTTCCTCGTCGCGACGACCC AGGCCCGTGCCGCGCATCATCCACCAGATATTCCACAACTGGAAAGACCCAGGCAACGAGACGATGCCGGCCGAC TGGCACGACATGCGCCAGTCCTGTATCGCCTTGCACCCCACCTGGGAGCACAAGGTATCGCCCTTCTCTGCCTCT GCAAGGTTACTTTTCCCTCGTCGCATGCAAGGACGGCAGCTAAGCCCAAGGCCGCCGCTGGCCCATGACTTGACA GCTCTGGCGTGAGGATGCCTCGCGCGCCTTCATCCAGACCGAATATCCCTGGTTTCTCGACACGTACGATAACTT CCGCTTCCCCGTCCAGAGAGTCGACGCCTTGCGATACTTTCTACTCAGGCACTTTGGCGGCATCTACATGGACCT TGACAATGTAAGAGAGAGAGAGAGTGAGAGAGAGAAGAGCACTAGTGACAGGAGGGTACTTGCTAACCACCGCCT CGCCCCCAATAGGGCTGTCGAGCCAATCTCGAGCCGCTCCTCTACTACCCGGCCTGGGTTACCGACGGCGGCCAG GGCGCCCTCAGCAATAACATTCTCGGCGCCGAGCCCGAGCACCCCTTCTGGATCCTCATGACCGACTCCATCAAG GCCTGGGCCGGCGACTTCGTCCTGCCCTACATCACCATCAGCTACGCCACCGGACAGTGGTACGAGACAGACATG TGGCAAATCTACCACGCCAGCAAGCCCGCCAGCGACCCGGACCTGCTGCGCGTCATGATGGACATGCGCCCGACC GGCGCCCCCTGGGTCTTCTTCACCGCCGGCCGCGGCGGCACCTGGGACAACTGGGACAACCAAGTCCTCGGCTGG TTCGGCAACCACCTGTTCGAGGCCGCCCTGTACGCCTTCGCCGCCCTCGGCCTCGCCTTTGCCCTAGCCTTTGCC CTTGGCCGCACCCTGAGGCGCCGGCGGAGCCGCAGGGGCGCAGACGAGCTGAAGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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