Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7118
Gene name
LocationContig_4:17494..18952
Strand-
Gene length (bp)1458
Transcript length (bp)1404
Coding sequence length (bp)1404
Protein length (aa) 468

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05346 DUF747 Eukaryotic membrane protein family 2.8E-114 2 385

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O60067|TAPT1_SCHPO Endoplasmic reticulum membrane protein 65 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.05 PE=1 SV=1 3 467 1.0E-85
sp|Q550C1|TAPT1_DICDI Protein TAPT1 homolog OS=Dictyostelium discoideum GN=DDB_G0277313 PE=3 SV=2 3 283 2.0E-55
sp|Q5EAY8|TAPT1_XENLA Transmembrane anterior posterior transformation protein 1 homolog OS=Xenopus laevis GN=tapt1 PE=2 SV=1 3 270 3.0E-49
sp|Q4VBD2|TAPT1_MOUSE Transmembrane anterior posterior transformation protein 1 OS=Mus musculus GN=Tapt1 PE=1 SV=2 3 271 4.0E-49
sp|Q5ZLG8|TAPT1_CHICK Transmembrane anterior posterior transformation protein 1 homolog OS=Gallus gallus GN=TAPT1 PE=2 SV=2 3 270 4.0E-49
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O60067|TAPT1_SCHPO Endoplasmic reticulum membrane protein 65 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.05 PE=1 SV=1 3 467 1.0E-85
sp|Q550C1|TAPT1_DICDI Protein TAPT1 homolog OS=Dictyostelium discoideum GN=DDB_G0277313 PE=3 SV=2 3 283 2.0E-55
sp|Q5EAY8|TAPT1_XENLA Transmembrane anterior posterior transformation protein 1 homolog OS=Xenopus laevis GN=tapt1 PE=2 SV=1 3 270 3.0E-49
sp|Q4VBD2|TAPT1_MOUSE Transmembrane anterior posterior transformation protein 1 OS=Mus musculus GN=Tapt1 PE=1 SV=2 3 271 4.0E-49
sp|Q5ZLG8|TAPT1_CHICK Transmembrane anterior posterior transformation protein 1 homolog OS=Gallus gallus GN=TAPT1 PE=2 SV=2 3 270 4.0E-49
sp|P40085|TAPT1_YEAST Endoplasmic reticulum membrane protein 65 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP65 PE=1 SV=1 3 269 6.0E-49
sp|Q6NXT6|TAPT1_HUMAN Transmembrane anterior posterior transformation protein 1 homolog OS=Homo sapiens GN=TAPT1 PE=1 SV=1 3 271 7.0E-49
sp|A2BIE7|TAPT1_DANRE Transmembrane anterior posterior transformation protein 1 homolog OS=Danio rerio GN=tapt1 PE=3 SV=1 3 259 2.0E-46
sp|Q9VED0|TAPT1_DROME Protein TAPT1 homolog OS=Drosophila melanogaster GN=CG7218 PE=2 SV=2 3 271 6.0E-46
sp|Q9U3H8|TAPT1_CAEEL Protein TAPT1 homolog OS=Caenorhabditis elegans GN=F26F2.7 PE=3 SV=1 3 276 8.0E-43
sp|F4HVJ3|POD1_ARATH Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana GN=POD1 PE=1 SV=1 4 289 4.0E-37
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 61 83 22
2 356 378 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7118
MTLDASRMYHFVRAQSAIKLYVIYNILEVGDRLLSAIGQDILECLFSTETLSRNPSGRSKIFLPLTMFLLALAYN
CLHSIALYYQVITLNVAVNSYSNALLTLLLSNQFVEIKSTVFKRFEKDNLFQLTCADIVERFQLWVMLLIIGMRN
VVEVGGLSVPGAGVESTYEDGTGATPLHPPSILPHSFTVLPSWIMSGEVLSPFLIVVGSEMLVDAIKHAYVTKFN
NIKPTFYSRTLDILCKDYYTNAFTTPALTRRLGLAVIPLSCLFIRASVQTYHMFLSTQIPTPMPPSTQTSLSEES
ATPSSPAMMAALSRFDALLRDSLGRATYGYPYGSPLNSRSWYSWTSDDMIAALTMVVVFFMVFLVLLIVKLLLGM
ALLQYSRNRYAKMKRREKMVSLGQTEHESHEARGSRYGARPEIEVGEERKRWINADPTEGLPSAKRQTGDTKKAE
GDYQGVFRFEMVAKRIW*
Coding >Hirsu2|7118
ATGACGCTCGACGCGAGCCGCATGTATCACTTCGTGCGGGCGCAGTCGGCCATCAAACTCTACGTCATCTACAAT
ATTCTCGAGGTGGGCGACCGCCTCCTGTCGGCCATCGGCCAGGACATCCTCGAATGTCTTTTCAGCACCGAGACG
CTGTCGCGCAACCCGTCCGGCCGGTCCAAGATCTTCCTGCCGCTCACCATGTTCCTGCTCGCCCTGGCCTATAAC
TGCCTGCACTCCATAGCCCTGTACTACCAGGTGATCACGCTCAACGTGGCGGTCAACTCGTACTCGAACGCCCTC
CTGACCCTGCTCCTCTCCAATCAGTTTGTCGAGATCAAAAGTACCGTCTTCAAGCGCTTCGAGAAGGACAACCTG
TTCCAGCTGACGTGTGCCGACATTGTGGAGCGGTTCCAGCTTTGGGTCATGCTTCTCATCATCGGCATGCGGAAC
GTTGTCGAGGTTGGGGGCCTCTCCGTACCGGGCGCGGGGGTCGAGTCGACGTACGAAGACGGCACGGGCGCGACG
CCGCTTCACCCGCCCTCTATCTTGCCGCACAGCTTCACCGTGCTGCCGTCGTGGATCATGTCGGGCGAGGTCCTG
TCGCCCTTCCTCATCGTCGTGGGCAGTGAGATGCTCGTCGACGCCATCAAGCACGCATACGTGACCAAGTTTAAC
AACATCAAGCCCACGTTCTACAGCAGGACGCTTGACATCCTGTGCAAGGACTATTACACGAATGCATTCACCACG
CCGGCCTTGACCCGGCGACTGGGCCTCGCCGTGATACCCCTGTCTTGCCTCTTCATCCGGGCATCGGTCCAGACC
TACCACATGTTCTTGTCCACACAGATTCCGACACCCATGCCGCCGTCGACCCAGACGTCGTTGAGTGAAGAGTCC
GCGACTCCGTCGTCGCCCGCCATGATGGCCGCGCTTAGCCGGTTCGACGCCCTCCTGCGGGACTCGTTGGGACGT
GCCACGTACGGCTACCCGTACGGATCGCCCCTCAACTCGCGGTCCTGGTACTCTTGGACGTCGGATGACATGATT
GCCGCCCTCACCATGGTTGTCGTCTTCTTCATGGTCTTCCTCGTCCTCCTCATCGTGAAGCTACTGTTGGGCATG
GCCCTCCTACAGTACTCGCGTAACAGATACGCAAAGATGAAGCGGAGGGAGAAGATGGTATCCCTCGGGCAGACG
GAACACGAGTCGCACGAGGCGCGCGGCAGCCGATACGGTGCCCGGCCCGAGATCGAGGTCGGGGAAGAGCGGAAG
CGCTGGATCAATGCGGACCCGACCGAGGGCCTGCCGAGCGCTAAGCGGCAGACCGGCGACACGAAGAAAGCCGAG
GGGGACTACCAGGGCGTGTTCCGATTCGAAATGGTGGCGAAGCGGATATGGTAG
Transcript >Hirsu2|7118
ATGACGCTCGACGCGAGCCGCATGTATCACTTCGTGCGGGCGCAGTCGGCCATCAAACTCTACGTCATCTACAAT
ATTCTCGAGGTGGGCGACCGCCTCCTGTCGGCCATCGGCCAGGACATCCTCGAATGTCTTTTCAGCACCGAGACG
CTGTCGCGCAACCCGTCCGGCCGGTCCAAGATCTTCCTGCCGCTCACCATGTTCCTGCTCGCCCTGGCCTATAAC
TGCCTGCACTCCATAGCCCTGTACTACCAGGTGATCACGCTCAACGTGGCGGTCAACTCGTACTCGAACGCCCTC
CTGACCCTGCTCCTCTCCAATCAGTTTGTCGAGATCAAAAGTACCGTCTTCAAGCGCTTCGAGAAGGACAACCTG
TTCCAGCTGACGTGTGCCGACATTGTGGAGCGGTTCCAGCTTTGGGTCATGCTTCTCATCATCGGCATGCGGAAC
GTTGTCGAGGTTGGGGGCCTCTCCGTACCGGGCGCGGGGGTCGAGTCGACGTACGAAGACGGCACGGGCGCGACG
CCGCTTCACCCGCCCTCTATCTTGCCGCACAGCTTCACCGTGCTGCCGTCGTGGATCATGTCGGGCGAGGTCCTG
TCGCCCTTCCTCATCGTCGTGGGCAGTGAGATGCTCGTCGACGCCATCAAGCACGCATACGTGACCAAGTTTAAC
AACATCAAGCCCACGTTCTACAGCAGGACGCTTGACATCCTGTGCAAGGACTATTACACGAATGCATTCACCACG
CCGGCCTTGACCCGGCGACTGGGCCTCGCCGTGATACCCCTGTCTTGCCTCTTCATCCGGGCATCGGTCCAGACC
TACCACATGTTCTTGTCCACACAGATTCCGACACCCATGCCGCCGTCGACCCAGACGTCGTTGAGTGAAGAGTCC
GCGACTCCGTCGTCGCCCGCCATGATGGCCGCGCTTAGCCGGTTCGACGCCCTCCTGCGGGACTCGTTGGGACGT
GCCACGTACGGCTACCCGTACGGATCGCCCCTCAACTCGCGGTCCTGGTACTCTTGGACGTCGGATGACATGATT
GCCGCCCTCACCATGGTTGTCGTCTTCTTCATGGTCTTCCTCGTCCTCCTCATCGTGAAGCTACTGTTGGGCATG
GCCCTCCTACAGTACTCGCGTAACAGATACGCAAAGATGAAGCGGAGGGAGAAGATGGTATCCCTCGGGCAGACG
GAACACGAGTCGCACGAGGCGCGCGGCAGCCGATACGGTGCCCGGCCCGAGATCGAGGTCGGGGAAGAGCGGAAG
CGCTGGATCAATGCGGACCCGACCGAGGGCCTGCCGAGCGCTAAGCGGCAGACCGGCGACACGAAGAAAGCCGAG
GGGGACTACCAGGGCGTGTTCCGATTCGAAATGGTGGCGAAGCGGATATGGTAG
Gene >Hirsu2|7118
ATGACGCTCGACGCGAGCCGCATGTATCACTTCGTGCGGGCGCAGTCGGCCATCAAACTCTACGTCATCTACAAT
ATTCTCGAGGTGGGCGACCGCCTCCTGTCGGCCATCGGCCAGGACATCCTCGAATGTCTTTTCAGCACCGAGACG
CTGTCGCGCAACCCGTCCGGCCGGTCCAAGATCTTCCTGCCGCTCACCATGTTCCTGCTCGCCCTGGCCTATAAC
TGCCTGCACTCCATAGCCCTGTACTACCAGGTGATCACGCTCAACGTGGCGGTCAACTCGTACTCGAACGCCCTC
CTGACCCTGCTCCTCTCCAATCAGTTTGTCGAGATCAAAAGTACCGTCTTCAAGCGCTTCGAGAAGGACAACCTG
TTCCAGCTGACGTGTGCCGACATTGTGGAGCGGTTCCAGCTTTGGGTCATGCTTCTCATCATCGGCATGCGGAAC
GTTGTCGAGGTTGGGGGCCTCTCCGTACCGGGCGCGGGGGTCGAGTCGACGTACGAAGACGGCACGGGCGCGACG
CCGCTTCACCCGCCCTCTATCTTGCCGCACAGCTTCACCGTGCTGCCGTCGTGGATCATGTCGGGCGAGGTCCTG
TCGCCCTTCCTCATCGTCGTGGGCAGTGAGATGCTCGTCGACGCCATCAAGCACGCATACGTGACCAAGTTTAAC
AACATCAAGCCCACGTTCTACAGCAGGACGCTTGACATCCTGTGCAAGGACTATTACACGAATGTGAGTCGGCCG
CCCCCAGCAATCCCATGCCTGCGCAGATCCTAACCGCGGCAGGCATTCACCACGCCGGCCTTGACCCGGCGACTG
GGCCTCGCCGTGATACCCCTGTCTTGCCTCTTCATCCGGGCATCGGTCCAGACCTACCACATGTTCTTGTCCACA
CAGATTCCGACACCCATGCCGCCGTCGACCCAGACGTCGTTGAGTGAAGAGTCCGCGACTCCGTCGTCGCCCGCC
ATGATGGCCGCGCTTAGCCGGTTCGACGCCCTCCTGCGGGACTCGTTGGGACGTGCCACGTACGGCTACCCGTAC
GGATCGCCCCTCAACTCGCGGTCCTGGTACTCTTGGACGTCGGATGACATGATTGCCGCCCTCACCATGGTTGTC
GTCTTCTTCATGGTCTTCCTCGTCCTCCTCATCGTGAAGCTACTGTTGGGCATGGCCCTCCTACAGTACTCGCGT
AACAGATACGCAAAGATGAAGCGGAGGGAGAAGATGGTATCCCTCGGGCAGACGGAACACGAGTCGCACGAGGCG
CGCGGCAGCCGATACGGTGCCCGGCCCGAGATCGAGGTCGGGGAAGAGCGGAAGCGCTGGATCAATGCGGACCCG
ACCGAGGGCCTGCCGAGCGCTAAGCGGCAGACCGGCGACACGAAGAAAGCCGAGGGGGACTACCAGGGCGTGTTC
CGATTCGAAATGGTGGCGAAGCGGATATGGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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