Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7087
Gene name
LocationContig_396:746..2294
Strand+
Gene length (bp)1548
Transcript length (bp)1548
Coding sequence length (bp)1548
Protein length (aa) 516

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01490 Aa_trans Transmembrane amino acid transporter protein 7.5E-78 123 509

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P36062|AVT3_YEAST Vacuolar amino acid transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT3 PE=1 SV=1 31 514 5.0E-120
sp|Q10074|AVT3_SCHPO Vacuolar amino acid transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avt3 PE=1 SV=1 13 510 2.0E-115
sp|P50944|AVT4_YEAST Vacuolar amino acid transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT4 PE=1 SV=1 1 510 6.0E-93
sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1 83 513 9.0E-35
sp|Q7Z2H8|S36A1_HUMAN Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1 77 514 9.0E-34
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P36062|AVT3_YEAST Vacuolar amino acid transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT3 PE=1 SV=1 31 514 5.0E-120
sp|Q10074|AVT3_SCHPO Vacuolar amino acid transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avt3 PE=1 SV=1 13 510 2.0E-115
sp|P50944|AVT4_YEAST Vacuolar amino acid transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT4 PE=1 SV=1 1 510 6.0E-93
sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1 83 513 9.0E-35
sp|Q7Z2H8|S36A1_HUMAN Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1 77 514 9.0E-34
sp|F4ILY9|ANTL1_ARATH Amino acid transporter ANTL1 OS=Arabidopsis thaliana GN=At2g42005 PE=2 SV=1 96 511 2.0E-31
sp|Q495N2|S36A3_HUMAN Proton-coupled amino acid transporter 3 OS=Homo sapiens GN=SLC36A3 PE=2 SV=2 94 511 2.0E-31
sp|Q9SF09|ANT1_ARATH Amino acid transporter ANT1 OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=1 92 509 5.0E-31
sp|Q6YBV0|S36A4_HUMAN Proton-coupled amino acid transporter 4 OS=Homo sapiens GN=SLC36A4 PE=1 SV=1 82 509 6.0E-31
sp|Q8CH36|S36A4_MOUSE Proton-coupled amino acid transporter 4 OS=Mus musculus GN=Slc36a4 PE=2 SV=1 82 509 8.0E-31
sp|Q8K4D3|S36A1_MOUSE Proton-coupled amino acid transporter 1 OS=Mus musculus GN=Slc36a1 PE=2 SV=1 89 514 2.0E-28
sp|Q4V8B1|S36A3_RAT Proton-coupled amino acid transporter 3 OS=Rattus norvegicus GN=Slc36a3 PE=2 SV=1 115 514 3.0E-28
sp|Q811P0|S36A3_MOUSE Proton-coupled amino acid transporter 3 OS=Mus musculus GN=Slc36a3 PE=2 SV=1 119 514 4.0E-28
sp|Q924A5|S36A1_RAT Proton-coupled amino acid transporter 1 OS=Rattus norvegicus GN=Slc36a1 PE=2 SV=1 89 514 7.0E-28
sp|Q8BHK3|S36A2_MOUSE Proton-coupled amino acid transporter 2 OS=Mus musculus GN=Slc36a2 PE=1 SV=1 127 505 4.0E-27
sp|Q495M3|S36A2_HUMAN Proton-coupled amino acid transporter 2 OS=Homo sapiens GN=SLC36A2 PE=1 SV=1 87 476 3.0E-26
sp|Q8K415|S36A2_RAT Proton-coupled amino acid transporter 2 OS=Rattus norvegicus GN=Slc36a2 PE=1 SV=1 94 409 3.0E-26
sp|Q9SVG0|ANTL2_ARATH Amino acid transporter ANTL2 OS=Arabidopsis thaliana GN=At4g38250 PE=1 SV=1 123 505 9.0E-26
sp|Q9FKY3|ANTL3_ARATH Amino acid transporter ANTL3 OS=Arabidopsis thaliana GN=At5g65990 PE=2 SV=1 102 478 1.0E-24
sp|Q503G8|S38A6_DANRE Probable sodium-coupled neutral amino acid transporter 6 OS=Danio rerio GN=slc38a6 PE=2 SV=1 88 514 3.0E-14
sp|Q99624|S38A3_HUMAN Sodium-coupled neutral amino acid transporter 3 OS=Homo sapiens GN=SLC38A3 PE=1 SV=1 94 512 1.0E-12
sp|Q5SPB1|S38A2_DANRE Sodium-coupled neutral amino acid transporter 2 OS=Danio rerio GN=slc38a2 PE=3 SV=1 91 515 2.0E-12
sp|Q9JHZ9|S38A3_RAT Sodium-coupled neutral amino acid transporter 3 OS=Rattus norvegicus GN=Slc38a3 PE=2 SV=1 78 513 1.0E-11
sp|Q9DCP2|S38A3_MOUSE Sodium-coupled neutral amino acid transporter 3 OS=Mus musculus GN=Slc38a3 PE=1 SV=1 121 513 1.0E-11
sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7 OS=Danio rerio GN=slc38a7 PE=2 SV=1 85 508 6.0E-11
sp|Q6WWW3|S38A6_RAT Probable sodium-coupled neutral amino acid transporter 6 OS=Rattus norvegicus GN=Slc38a6 PE=2 SV=1 92 514 1.0E-09
sp|G3UVW3|S38A6_MOUSE Probable sodium-coupled neutral amino acid transporter 6 OS=Mus musculus GN=Slc38a6 PE=2 SV=1 98 514 2.0E-09
sp|Q5E9S9|S38A5_BOVIN Sodium-coupled neutral amino acid transporter 5 OS=Bos taurus GN=SLC38A5 PE=2 SV=1 75 512 2.0E-09
sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6 OS=Homo sapiens GN=SLC38A6 PE=1 SV=2 106 514 5.0E-09
sp|Q9JM15|S38A1_RAT Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1 80 512 2.0E-08
sp|Q8WUX1|S38A5_HUMAN Sodium-coupled neutral amino acid transporter 5 OS=Homo sapiens GN=SLC38A5 PE=1 SV=1 80 512 5.0E-08
sp|Q3U1J0|S38A5_MOUSE Sodium-coupled neutral amino acid transporter 5 OS=Mus musculus GN=Slc38a5 PE=1 SV=1 91 512 6.0E-08
sp|Q8K2P7|S38A1_MOUSE Sodium-coupled neutral amino acid transporter 1 OS=Mus musculus GN=Slc38a1 PE=1 SV=1 80 414 6.0E-08
sp|P34579|UNC47_CAEEL Vesicular GABA transporter OS=Caenorhabditis elegans GN=unc-47 PE=1 SV=2 79 515 1.0E-07
sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1 80 512 3.0E-07
sp|Q3USY0|S38AB_MOUSE Putative sodium-coupled neutral amino acid transporter 11 OS=Mus musculus GN=Slc38a11 PE=2 SV=2 96 502 6.0E-07
sp|Q9SS86|LHTL4_ARATH Lysine histidine transporter-like 4 OS=Arabidopsis thaliana GN=At3g01760 PE=3 SV=2 85 502 7.0E-07
sp|A2VCW5|S38A5_RAT Sodium-coupled neutral amino acid transporter 5 OS=Rattus norvegicus GN=Slc38a5 PE=1 SV=1 121 512 7.0E-07
sp|Q5R443|S38A1_PONAB Sodium-coupled neutral amino acid transporter 1 OS=Pongo abelii GN=SLC38A1 PE=2 SV=1 80 512 8.0E-07
sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT1 PE=1 SV=1 8 478 2.0E-06
sp|Q6DIV6|VIAAT_XENTR Vesicular inhibitory amino acid transporter OS=Xenopus tropicalis GN=slc32a1 PE=2 SV=1 130 502 3.0E-06
sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1 81 498 6.0E-06
sp|Q6PF45|VIAAT_XENLA Vesicular inhibitory amino acid transporter OS=Xenopus laevis GN=slc32a1 PE=2 SV=1 130 502 8.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

Domain # Start End Length
1 153 175 22
2 205 227 22
3 240 259 19
4 274 293 19
5 306 328 22
6 343 365 22
7 431 450 19
8 455 477 22
9 489 511 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7087
MYKIKARASSLRRAATFSHQPSPRLHPDNELSYPEQREPGGFRRQHLHLRARQRRFSGPLVVAKNFVDFLDLYGS
FAGEDLEDADTSEDESAIDDRSEDEAADRRPLLGHRRSSRRYTRGGDASTVKTFFTLLKAFIGTGIMFLPKAFRN
GGILFSSLTLVAVSLINCLCFRLLLDCRQKYGGGYGELGAAIVGPRFRSIILASIAISQLGFVCAGLIFTAENLL
AFLQAVSRDRRGFDLGVPSLIALQLVPLIPLALIRNISKLGPVALLSDVFILAGLAYIWYYDIWTLAADGLAPSV
RLFNPSAFTLTVGSAIFTFEGIGLILPIQSSMRKPEHFSGLLYLVMFLITIIFTSVGALCYATFGEATRIQVISN
FPQDSALVNAVQLLYSLAVLGGEPVQLFPAVRILETSLFGERATGKKSLAIKWKKNAIRSAIVALCIGISMIGAT
DLDKFVSLIGSFACVPLVYIYPAYLHYKGAADRSWAKTLDLALMVLGLVAMVYTTSVTVFQWIET*
Coding >Hirsu2|7087
ATGTACAAGATCAAGGCCCGGGCCAGCTCCCTACGTCGTGCGGCTACCTTCTCTCATCAGCCGTCGCCCCGACTT
CATCCGGACAATGAGCTTTCGTATCCAGAACAGCGGGAACCCGGGGGCTTCAGGCGCCAGCATCTACACCTCAGG
GCCCGCCAGCGGCGCTTTAGTGGCCCCCTGGTTGTTGCCAAGAATTTCGTCGACTTCCTTGATCTGTACGGTAGC
TTTGCTGGTGAGGACCTCGAAGATGCTGACACGTCCGAAGACGAGTCCGCCATAGACGATCGCTCAGAAGACGAA
GCCGCCGATCGTCGCCCGCTGCTGGGACACCGCAGAAGCTCTAGGCGCTATACTCGAGGTGGCGACGCGAGCACC
GTTAAGACTTTCTTCACTCTACTCAAGGCCTTCATCGGCACCGGCATCATGTTTCTCCCCAAGGCATTTCGGAAC
GGTGGGATTCTCTTTTCGTCCCTTACCCTGGTGGCCGTCTCCCTCATCAACTGCCTGTGCTTTCGCCTGCTCCTG
GATTGCCGTCAGAAGTATGGTGGAGGATATGGAGAACTGGGCGCAGCCATTGTCGGACCGCGGTTTCGCAGCATT
ATCCTCGCATCCATAGCCATCTCCCAGCTGGGATTTGTCTGCGCCGGCCTCATATTTACTGCCGAAAACCTCTTG
GCCTTTCTCCAGGCCGTGTCGCGAGACCGCCGTGGCTTCGACTTGGGGGTTCCCAGCCTCATCGCTCTTCAACTC
GTACCCCTCATTCCTCTGGCTCTCATCCGAAACATATCTAAGCTGGGCCCGGTTGCTCTGCTCTCGGATGTCTTC
ATCCTCGCCGGTTTGGCCTACATTTGGTACTACGACATATGGACGCTGGCGGCCGATGGCCTCGCGCCGAGCGTG
CGCTTGTTCAACCCGTCAGCTTTTACGTTGACCGTCGGATCGGCAATCTTTACGTTTGAGGGCATTGGCCTCATT
CTACCCATCCAGTCTAGCATGAGAAAACCGGAGCATTTCAGTGGGCTCCTCTACCTTGTCATGTTCCTCATTACC
ATTATCTTCACCTCTGTCGGTGCGCTTTGTTACGCCACGTTTGGGGAAGCGACCCGGATCCAGGTGATATCCAAT
TTCCCGCAAGACTCGGCACTTGTCAACGCGGTGCAGCTGCTATACTCCCTGGCCGTTCTTGGAGGCGAGCCTGTG
CAGCTGTTTCCCGCAGTGCGCATACTCGAAACATCGTTATTCGGAGAGCGAGCGACAGGCAAGAAGAGTTTGGCA
ATCAAATGGAAAAAGAATGCGATACGGTCGGCGATCGTGGCGCTGTGTATCGGCATCAGCATGATTGGGGCGACT
GACCTGGACAAGTTTGTGTCCTTGATTGGAAGCTTTGCGTGCGTTCCGCTCGTGTACATATATCCGGCCTATCTG
CACTACAAGGGAGCCGCCGACAGGAGCTGGGCCAAGACGCTGGACCTCGCACTGATGGTGCTCGGCCTCGTTGCC
ATGGTCTACACTACCAGCGTGACAGTGTTCCAGTGGATCGAGACATAG
Transcript >Hirsu2|7087
ATGTACAAGATCAAGGCCCGGGCCAGCTCCCTACGTCGTGCGGCTACCTTCTCTCATCAGCCGTCGCCCCGACTT
CATCCGGACAATGAGCTTTCGTATCCAGAACAGCGGGAACCCGGGGGCTTCAGGCGCCAGCATCTACACCTCAGG
GCCCGCCAGCGGCGCTTTAGTGGCCCCCTGGTTGTTGCCAAGAATTTCGTCGACTTCCTTGATCTGTACGGTAGC
TTTGCTGGTGAGGACCTCGAAGATGCTGACACGTCCGAAGACGAGTCCGCCATAGACGATCGCTCAGAAGACGAA
GCCGCCGATCGTCGCCCGCTGCTGGGACACCGCAGAAGCTCTAGGCGCTATACTCGAGGTGGCGACGCGAGCACC
GTTAAGACTTTCTTCACTCTACTCAAGGCCTTCATCGGCACCGGCATCATGTTTCTCCCCAAGGCATTTCGGAAC
GGTGGGATTCTCTTTTCGTCCCTTACCCTGGTGGCCGTCTCCCTCATCAACTGCCTGTGCTTTCGCCTGCTCCTG
GATTGCCGTCAGAAGTATGGTGGAGGATATGGAGAACTGGGCGCAGCCATTGTCGGACCGCGGTTTCGCAGCATT
ATCCTCGCATCCATAGCCATCTCCCAGCTGGGATTTGTCTGCGCCGGCCTCATATTTACTGCCGAAAACCTCTTG
GCCTTTCTCCAGGCCGTGTCGCGAGACCGCCGTGGCTTCGACTTGGGGGTTCCCAGCCTCATCGCTCTTCAACTC
GTACCCCTCATTCCTCTGGCTCTCATCCGAAACATATCTAAGCTGGGCCCGGTTGCTCTGCTCTCGGATGTCTTC
ATCCTCGCCGGTTTGGCCTACATTTGGTACTACGACATATGGACGCTGGCGGCCGATGGCCTCGCGCCGAGCGTG
CGCTTGTTCAACCCGTCAGCTTTTACGTTGACCGTCGGATCGGCAATCTTTACGTTTGAGGGCATTGGCCTCATT
CTACCCATCCAGTCTAGCATGAGAAAACCGGAGCATTTCAGTGGGCTCCTCTACCTTGTCATGTTCCTCATTACC
ATTATCTTCACCTCTGTCGGTGCGCTTTGTTACGCCACGTTTGGGGAAGCGACCCGGATCCAGGTGATATCCAAT
TTCCCGCAAGACTCGGCACTTGTCAACGCGGTGCAGCTGCTATACTCCCTGGCCGTTCTTGGAGGCGAGCCTGTG
CAGCTGTTTCCCGCAGTGCGCATACTCGAAACATCGTTATTCGGAGAGCGAGCGACAGGCAAGAAGAGTTTGGCA
ATCAAATGGAAAAAGAATGCGATACGGTCGGCGATCGTGGCGCTGTGTATCGGCATCAGCATGATTGGGGCGACT
GACCTGGACAAGTTTGTGTCCTTGATTGGAAGCTTTGCGTGCGTTCCGCTCGTGTACATATATCCGGCCTATCTG
CACTACAAGGGAGCCGCCGACAGGAGCTGGGCCAAGACGCTGGACCTCGCACTGATGGTGCTCGGCCTCGTTGCC
ATGGTCTACACTACCAGCGTGACAGTGTTCCAGTGGATCGAGACATAG
Gene >Hirsu2|7087
ATGTACAAGATCAAGGCCCGGGCCAGCTCCCTACGTCGTGCGGCTACCTTCTCTCATCAGCCGTCGCCCCGACTT
CATCCGGACAATGAGCTTTCGTATCCAGAACAGCGGGAACCCGGGGGCTTCAGGCGCCAGCATCTACACCTCAGG
GCCCGCCAGCGGCGCTTTAGTGGCCCCCTGGTTGTTGCCAAGAATTTCGTCGACTTCCTTGATCTGTACGGTAGC
TTTGCTGGTGAGGACCTCGAAGATGCTGACACGTCCGAAGACGAGTCCGCCATAGACGATCGCTCAGAAGACGAA
GCCGCCGATCGTCGCCCGCTGCTGGGACACCGCAGAAGCTCTAGGCGCTATACTCGAGGTGGCGACGCGAGCACC
GTTAAGACTTTCTTCACTCTACTCAAGGCCTTCATCGGCACCGGCATCATGTTTCTCCCCAAGGCATTTCGGAAC
GGTGGGATTCTCTTTTCGTCCCTTACCCTGGTGGCCGTCTCCCTCATCAACTGCCTGTGCTTTCGCCTGCTCCTG
GATTGCCGTCAGAAGTATGGTGGAGGATATGGAGAACTGGGCGCAGCCATTGTCGGACCGCGGTTTCGCAGCATT
ATCCTCGCATCCATAGCCATCTCCCAGCTGGGATTTGTCTGCGCCGGCCTCATATTTACTGCCGAAAACCTCTTG
GCCTTTCTCCAGGCCGTGTCGCGAGACCGCCGTGGCTTCGACTTGGGGGTTCCCAGCCTCATCGCTCTTCAACTC
GTACCCCTCATTCCTCTGGCTCTCATCCGAAACATATCTAAGCTGGGCCCGGTTGCTCTGCTCTCGGATGTCTTC
ATCCTCGCCGGTTTGGCCTACATTTGGTACTACGACATATGGACGCTGGCGGCCGATGGCCTCGCGCCGAGCGTG
CGCTTGTTCAACCCGTCAGCTTTTACGTTGACCGTCGGATCGGCAATCTTTACGTTTGAGGGCATTGGCCTCATT
CTACCCATCCAGTCTAGCATGAGAAAACCGGAGCATTTCAGTGGGCTCCTCTACCTTGTCATGTTCCTCATTACC
ATTATCTTCACCTCTGTCGGTGCGCTTTGTTACGCCACGTTTGGGGAAGCGACCCGGATCCAGGTGATATCCAAT
TTCCCGCAAGACTCGGCACTTGTCAACGCGGTGCAGCTGCTATACTCCCTGGCCGTTCTTGGAGGCGAGCCTGTG
CAGCTGTTTCCCGCAGTGCGCATACTCGAAACATCGTTATTCGGAGAGCGAGCGACAGGCAAGAAGAGTTTGGCA
ATCAAATGGAAAAAGAATGCGATACGGTCGGCGATCGTGGCGCTGTGTATCGGCATCAGCATGATTGGGGCGACT
GACCTGGACAAGTTTGTGTCCTTGATTGGAAGCTTTGCGTGCGTTCCGCTCGTGTACATATATCCGGCCTATCTG
CACTACAAGGGAGCCGCCGACAGGAGCTGGGCCAAGACGCTGGACCTCGCACTGATGGTGCTCGGCCTCGTTGCC
ATGGTCTACACTACCAGCGTGACAGTGTTCCAGTGGATCGAGACATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail