Protein ID | Hirsu2|7062 |
Gene name | |
Location | Contig_392:16195..17131 |
Strand | + |
Gene length (bp) | 936 |
Transcript length (bp) | 936 |
Coding sequence length (bp) | 936 |
Protein length (aa) | 312 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1999 | 0.1085 | 0.8586 | 0.1013 | 0.0887 | 0.0206 | 0.2774 | 0.2508 | 0.1294 | 0.0043 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999733 |
Orthofinder run ID | 4 |
Orthogroup | 65 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7062 MNLVQILVFLWSAVPVLADYGQTSRCYVAEDGPTNNFLGNFLKNGSSCITEGKENILACLDKKLDRDAVPLLSPL IDVIRRWERYYGIEMHKAFADVGRSNDPNDWNAWSRDRDWNVWERLHTHWAETGWLCFYDHNPRLSNTLQPRDAG LLTLFFSDKNGLRSPILKSGRIWRFDPKYHPCAATLHADRVRQIKIVSRLADNVKNWGASSWQTAQEAQLYRDTY STDPFLQAVITGWFAKDYTCPAGLECQSEPGDGKIWLPRNGMNYLNRLAKRLISIKETCIVLHGPLPPSSISANT LYVAVNGTEWA* |
Coding | >Hirsu2|7062 ATGAATCTCGTACAGATCCTCGTCTTTCTCTGGTCTGCCGTGCCTGTGCTAGCGGACTACGGGCAGACCTCTCGC TGCTATGTGGCGGAGGACGGGCCGACTAATAATTTCTTGGGAAACTTCCTGAAGAACGGATCGAGCTGCATAACG GAGGGCAAAGAAAATATCTTGGCTTGTCTAGACAAGAAACTAGATCGAGACGCGGTACCGCTCCTTTCTCCTCTT ATCGACGTCATCCGAAGATGGGAGCGCTATTACGGCATTGAGATGCACAAGGCTTTTGCCGACGTCGGGAGGTCA AACGACCCGAACGACTGGAATGCATGGTCCAGGGATCGTGATTGGAACGTCTGGGAGAGACTGCATACCCATTGG GCCGAAACGGGCTGGCTCTGCTTCTACGACCATAACCCCCGACTATCGAATACCTTGCAGCCACGAGACGCCGGC TTGCTCACCCTCTTCTTCTCGGACAAGAACGGTCTCCGGTCGCCTATATTGAAATCCGGGAGGATCTGGCGCTTC GACCCAAAATACCACCCCTGCGCGGCGACTCTGCACGCCGATCGAGTACGTCAGATCAAGATCGTCAGCCGACTC GCAGACAATGTGAAGAACTGGGGAGCATCGTCCTGGCAGACAGCTCAGGAAGCTCAATTATATCGCGACACCTAC TCCACCGATCCTTTCCTCCAGGCGGTCATTACCGGTTGGTTCGCCAAAGACTACACCTGTCCCGCCGGCTTGGAA TGTCAGAGCGAGCCCGGGGATGGAAAGATATGGCTGCCGAGGAACGGCATGAACTACCTGAATCGGCTCGCGAAA AGATTGATCAGCATAAAGGAGACATGTATTGTGCTTCACGGTCCGCTTCCCCCGAGCAGTATTTCCGCGAACACG TTATACGTAGCTGTCAATGGCACAGAGTGGGCGTGA |
Transcript | >Hirsu2|7062 ATGAATCTCGTACAGATCCTCGTCTTTCTCTGGTCTGCCGTGCCTGTGCTAGCGGACTACGGGCAGACCTCTCGC TGCTATGTGGCGGAGGACGGGCCGACTAATAATTTCTTGGGAAACTTCCTGAAGAACGGATCGAGCTGCATAACG GAGGGCAAAGAAAATATCTTGGCTTGTCTAGACAAGAAACTAGATCGAGACGCGGTACCGCTCCTTTCTCCTCTT ATCGACGTCATCCGAAGATGGGAGCGCTATTACGGCATTGAGATGCACAAGGCTTTTGCCGACGTCGGGAGGTCA AACGACCCGAACGACTGGAATGCATGGTCCAGGGATCGTGATTGGAACGTCTGGGAGAGACTGCATACCCATTGG GCCGAAACGGGCTGGCTCTGCTTCTACGACCATAACCCCCGACTATCGAATACCTTGCAGCCACGAGACGCCGGC TTGCTCACCCTCTTCTTCTCGGACAAGAACGGTCTCCGGTCGCCTATATTGAAATCCGGGAGGATCTGGCGCTTC GACCCAAAATACCACCCCTGCGCGGCGACTCTGCACGCCGATCGAGTACGTCAGATCAAGATCGTCAGCCGACTC GCAGACAATGTGAAGAACTGGGGAGCATCGTCCTGGCAGACAGCTCAGGAAGCTCAATTATATCGCGACACCTAC TCCACCGATCCTTTCCTCCAGGCGGTCATTACCGGTTGGTTCGCCAAAGACTACACCTGTCCCGCCGGCTTGGAA TGTCAGAGCGAGCCCGGGGATGGAAAGATATGGCTGCCGAGGAACGGCATGAACTACCTGAATCGGCTCGCGAAA AGATTGATCAGCATAAAGGAGACATGTATTGTGCTTCACGGTCCGCTTCCCCCGAGCAGTATTTCCGCGAACACG TTATACGTAGCTGTCAATGGCACAGAGTGGGCGTGA |
Gene | >Hirsu2|7062 ATGAATCTCGTACAGATCCTCGTCTTTCTCTGGTCTGCCGTGCCTGTGCTAGCGGACTACGGGCAGACCTCTCGC TGCTATGTGGCGGAGGACGGGCCGACTAATAATTTCTTGGGAAACTTCCTGAAGAACGGATCGAGCTGCATAACG GAGGGCAAAGAAAATATCTTGGCTTGTCTAGACAAGAAACTAGATCGAGACGCGGTACCGCTCCTTTCTCCTCTT ATCGACGTCATCCGAAGATGGGAGCGCTATTACGGCATTGAGATGCACAAGGCTTTTGCCGACGTCGGGAGGTCA AACGACCCGAACGACTGGAATGCATGGTCCAGGGATCGTGATTGGAACGTCTGGGAGAGACTGCATACCCATTGG GCCGAAACGGGCTGGCTCTGCTTCTACGACCATAACCCCCGACTATCGAATACCTTGCAGCCACGAGACGCCGGC TTGCTCACCCTCTTCTTCTCGGACAAGAACGGTCTCCGGTCGCCTATATTGAAATCCGGGAGGATCTGGCGCTTC GACCCAAAATACCACCCCTGCGCGGCGACTCTGCACGCCGATCGAGTACGTCAGATCAAGATCGTCAGCCGACTC GCAGACAATGTGAAGAACTGGGGAGCATCGTCCTGGCAGACAGCTCAGGAAGCTCAATTATATCGCGACACCTAC TCCACCGATCCTTTCCTCCAGGCGGTCATTACCGGTTGGTTCGCCAAAGACTACACCTGTCCCGCCGGCTTGGAA TGTCAGAGCGAGCCCGGGGATGGAAAGATATGGCTGCCGAGGAACGGCATGAACTACCTGAATCGGCTCGCGAAA AGATTGATCAGCATAAAGGAGACATGTATTGTGCTTCACGGTCCGCTTCCCCCGAGCAGTATTTCCGCGAACACG TTATACGTAGCTGTCAATGGCACAGAGTGGGCGTGA |