© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7044 |
| Gene name | |
| Location | Contig_390:51..681 |
| Strand | + |
| Gene length (bp) | 630 |
| Transcript length (bp) | 480 |
| Coding sequence length (bp) | 480 |
| Protein length (aa) | 160 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04749 | PLAC8 | PLAC8 family | 5.8E-18 | 12 | 112 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6MW50|YB290_NEUCR | Uncharacterized protein NCU10291 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B4B2.090 PE=4 SV=1 | 10 | 130 | 1.0E-10 |
| sp|D9HP27|CNR11_MAIZE | Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1 | 6 | 142 | 4.0E-08 |
| sp|D9HP26|CNR10_MAIZE | Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1 | 8 | 116 | 4.0E-08 |
| sp|Q9LQU4|PCR2_ARATH | Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1 | 8 | 145 | 4.0E-07 |
| sp|Q9LS43|PCR7_ARATH | Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1 | 11 | 116 | 9.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6MW50|YB290_NEUCR | Uncharacterized protein NCU10291 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B4B2.090 PE=4 SV=1 | 10 | 130 | 1.0E-10 |
| sp|D9HP27|CNR11_MAIZE | Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1 | 6 | 142 | 4.0E-08 |
| sp|D9HP26|CNR10_MAIZE | Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1 | 8 | 116 | 4.0E-08 |
| sp|Q9LQU4|PCR2_ARATH | Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1 | 8 | 145 | 4.0E-07 |
| sp|Q9LS43|PCR7_ARATH | Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1 | 11 | 116 | 9.0E-07 |
| sp|P0CW97|PCR3_ARATH | Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3 PE=3 SV=1 | 8 | 145 | 1.0E-06 |
| sp|Q9LQU2|PCR1_ARATH | Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1 PE=1 SV=1 | 8 | 145 | 4.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7044 MEQQQQPAHGEWRTGLFSGDGGDCLHACCSPCTLLGRSTSRMRDPSMQSYSLFNGDCAIFGALCIFTGCGWIFNV AKRNELREHYGIDGSFGGDCCASYWCLCCAMAQQSTEVKRRTAGLPQPDTQGYQPEKHGMAMPPPPPPPGPVPQE PLKHPPPQE* |
| Coding | >Hirsu2|7044 ATGGAGCAACAGCAGCAGCCCGCCCACGGCGAGTGGCGCACCGGCCTGTTCAGCGGCGATGGCGGCGACTGTCTG CACGCCTGCTGCTCCCCCTGCACCCTCCTCGGCCGGTCGACGAGCCGGATGCGCGACCCGTCGATGCAGAGCTAC AGCCTGTTCAACGGCGACTGCGCCATCTTTGGCGCGCTGTGCATCTTCACCGGCTGTGGCTGGATCTTCAACGTG GCCAAGCGCAACGAGCTCCGCGAGCACTACGGCATCGACGGCAGCTTCGGCGGCGACTGCTGCGCCAGCTACTGG TGTCTCTGCTGCGCCATGGCCCAGCAGAGCACCGAGGTCAAGCGCCGCACCGCCGGCCTGCCCCAGCCCGACACG CAGGGCTACCAGCCGGAGAAGCACGGCATGGCCATGCCGCCTCCGCCCCCGCCCCCGGGCCCCGTCCCGCAGGAG CCGCTGAAGCATCCTCCCCCCCAGGAGTAG |
| Transcript | >Hirsu2|7044 ATGGAGCAACAGCAGCAGCCCGCCCACGGCGAGTGGCGCACCGGCCTGTTCAGCGGCGATGGCGGCGACTGTCTG CACGCCTGCTGCTCCCCCTGCACCCTCCTCGGCCGGTCGACGAGCCGGATGCGCGACCCGTCGATGCAGAGCTAC AGCCTGTTCAACGGCGACTGCGCCATCTTTGGCGCGCTGTGCATCTTCACCGGCTGTGGCTGGATCTTCAACGTG GCCAAGCGCAACGAGCTCCGCGAGCACTACGGCATCGACGGCAGCTTCGGCGGCGACTGCTGCGCCAGCTACTGG TGTCTCTGCTGCGCCATGGCCCAGCAGAGCACCGAGGTCAAGCGCCGCACCGCCGGCCTGCCCCAGCCCGACACG CAGGGCTACCAGCCGGAGAAGCACGGCATGGCCATGCCGCCTCCGCCCCCGCCCCCGGGCCCCGTCCCGCAGGAG CCGCTGAAGCATCCTCCCCCCCAGGAGTAG |
| Gene | >Hirsu2|7044 ATGGAGCAACAGCAGCAGCCCGCCCACGGCGAGTGGCGCACCGGCCTGTTCAGCGGCGATGGCGGCGACTGTCTG CACGCCTGCTGCTCCCCCTGCACCCGTACGTCGTCGTCGCGCCTCTCCCCCTCGGCAAGATTGCGTCCGTGTTTT TTTTTTTCTTCTTGCGACTGACGCGCTCTTCGCCCAGTCCTCGGCCGGTCGACGAGCCGGATGCGCGACCCGTCG ATGCAGAGCTACAGCCTGTTCAACGGCGACTGCGCCATCTTTGGCGCGCTGTGCATCTTCACCGGCTGTGGCTGG ATGTACGTTTCTCTTCTCCCTCCCCTCTCCCTCTCCCCGGTTCCGGCGGCTGACGTCGCGCCCAGCTTCAACGTG GCCAAGCGCAACGAGCTCCGCGAGCACTACGGCATCGACGGCAGCTTCGGCGGCGACTGCTGCGCCAGCTACTGG TGTCTCTGCTGCGCCATGGCCCAGCAGAGCACCGAGGTCAAGCGCCGCACCGCCGGCCTGCCCCAGCCCGACACG CAGGGCTACCAGCCGGAGAAGCACGGCATGGCCATGCCGCCTCCGCCCCCGCCCCCGGGCCCCGTCCCGCAGGAG CCGCTGAAGCATCCTCCCCCCCAGGAGTAG |