Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7015
Gene name
LocationContig_388:4743..5568
Strand+
Gene length (bp)825
Transcript length (bp)825
Coding sequence length (bp)825
Protein length (aa) 275

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

Domain # Start End Length
1 103 125 22
2 151 173 22
3 198 220 22
4 235 257 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7015
MASLPLPQCGPVTGNSDLYGLGVRIGVYAQWVATLLTTVFEPSNESPLRLLNLIVQTAIFLGLCTESGHRASAVG
SLITQFLLCGSLSSVTGDGISHLGHASGILRALFYTAFSAYGIWFWFVGFDEMLRPGCPEIAFFGPSLITGWFRS
LGRVVSVLGLVVCVLLLAFSLYISVRRFRPGLRAGFTRPSGRRPRVEITLMLLSMALLGLSVATIEYLIQVNNIQ
GVGAAKIGTVAQLIPLLAGTLACFLSVWKIVFSNLLFQKRCWFLLGWHL*
Coding >Hirsu2|7015
ATGGCTTCTCTCCCGCTCCCGCAGTGCGGCCCCGTCACCGGCAACTCGGACCTTTACGGCCTCGGCGTCCGCATC
GGCGTCTACGCCCAGTGGGTCGCCACCCTGCTGACGACCGTGTTCGAGCCGAGCAACGAGAGCCCGCTGCGGCTG
CTCAACCTCATCGTCCAGACGGCCATCTTCCTCGGCCTCTGCACCGAGTCCGGCCATCGGGCCAGCGCCGTCGGC
TCCCTCATCACCCAGTTCCTGCTCTGCGGCTCCCTGTCGAGCGTGACGGGCGACGGCATCAGCCACCTGGGCCAC
GCGTCGGGCATCCTTCGCGCCCTCTTCTACACCGCCTTCTCCGCCTACGGCATCTGGTTCTGGTTCGTCGGGTTC
GACGAGATGCTCCGCCCGGGCTGCCCCGAGATCGCCTTCTTCGGGCCCTCGCTCATCACCGGCTGGTTCCGCTCG
CTCGGCCGCGTCGTCTCCGTCCTCGGCCTCGTCGTCTGCGTTCTTCTCCTGGCCTTCAGCCTGTACATCTCGGTG
CGGAGGTTCCGCCCCGGCCTGCGGGCCGGCTTCACGAGGCCGTCGGGCCGACGTCCGCGCGTCGAGATAACGCTC
ATGCTCCTCTCCATGGCCCTGCTCGGCCTCTCCGTTGCCACCATCGAGTACCTGATCCAGGTCAACAACATCCAG
GGCGTCGGCGCGGCCAAGATTGGTACCGTAGCCCAGCTGATCCCGCTTCTTGCCGGGACACTGGCCTGTTTCTTG
TCGGTTTGGAAGATAGTCTTCAGCAATTTGCTTTTTCAAAAGAGATGCTGGTTTCTACTTGGATGGCACCTATAG
Transcript >Hirsu2|7015
ATGGCTTCTCTCCCGCTCCCGCAGTGCGGCCCCGTCACCGGCAACTCGGACCTTTACGGCCTCGGCGTCCGCATC
GGCGTCTACGCCCAGTGGGTCGCCACCCTGCTGACGACCGTGTTCGAGCCGAGCAACGAGAGCCCGCTGCGGCTG
CTCAACCTCATCGTCCAGACGGCCATCTTCCTCGGCCTCTGCACCGAGTCCGGCCATCGGGCCAGCGCCGTCGGC
TCCCTCATCACCCAGTTCCTGCTCTGCGGCTCCCTGTCGAGCGTGACGGGCGACGGCATCAGCCACCTGGGCCAC
GCGTCGGGCATCCTTCGCGCCCTCTTCTACACCGCCTTCTCCGCCTACGGCATCTGGTTCTGGTTCGTCGGGTTC
GACGAGATGCTCCGCCCGGGCTGCCCCGAGATCGCCTTCTTCGGGCCCTCGCTCATCACCGGCTGGTTCCGCTCG
CTCGGCCGCGTCGTCTCCGTCCTCGGCCTCGTCGTCTGCGTTCTTCTCCTGGCCTTCAGCCTGTACATCTCGGTG
CGGAGGTTCCGCCCCGGCCTGCGGGCCGGCTTCACGAGGCCGTCGGGCCGACGTCCGCGCGTCGAGATAACGCTC
ATGCTCCTCTCCATGGCCCTGCTCGGCCTCTCCGTTGCCACCATCGAGTACCTGATCCAGGTCAACAACATCCAG
GGCGTCGGCGCGGCCAAGATTGGTACCGTAGCCCAGCTGATCCCGCTTCTTGCCGGGACACTGGCCTGTTTCTTG
TCGGTTTGGAAGATAGTCTTCAGCAATTTGCTTTTTCAAAAGAGATGCTGGTTTCTACTTGGATGGCACCTATAG
Gene >Hirsu2|7015
ATGGCTTCTCTCCCGCTCCCGCAGTGCGGCCCCGTCACCGGCAACTCGGACCTTTACGGCCTCGGCGTCCGCATC
GGCGTCTACGCCCAGTGGGTCGCCACCCTGCTGACGACCGTGTTCGAGCCGAGCAACGAGAGCCCGCTGCGGCTG
CTCAACCTCATCGTCCAGACGGCCATCTTCCTCGGCCTCTGCACCGAGTCCGGCCATCGGGCCAGCGCCGTCGGC
TCCCTCATCACCCAGTTCCTGCTCTGCGGCTCCCTGTCGAGCGTGACGGGCGACGGCATCAGCCACCTGGGCCAC
GCGTCGGGCATCCTTCGCGCCCTCTTCTACACCGCCTTCTCCGCCTACGGCATCTGGTTCTGGTTCGTCGGGTTC
GACGAGATGCTCCGCCCGGGCTGCCCCGAGATCGCCTTCTTCGGGCCCTCGCTCATCACCGGCTGGTTCCGCTCG
CTCGGCCGCGTCGTCTCCGTCCTCGGCCTCGTCGTCTGCGTTCTTCTCCTGGCCTTCAGCCTGTACATCTCGGTG
CGGAGGTTCCGCCCCGGCCTGCGGGCCGGCTTCACGAGGCCGTCGGGCCGACGTCCGCGCGTCGAGATAACGCTC
ATGCTCCTCTCCATGGCCCTGCTCGGCCTCTCCGTTGCCACCATCGAGTACCTGATCCAGGTCAACAACATCCAG
GGCGTCGGCGCGGCCAAGATTGGTACCGTAGCCCAGCTGATCCCGCTTCTTGCCGGGACACTGGCCTGTTTCTTG
TCGGTTTGGAAGATAGTCTTCAGCAATTTGCTTTTTCAAAAGAGATGCTGGTTTCTACTTGGATGGCACCTATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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