© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7014 |
| Gene name | |
| Location | Contig_388:2476..3629 |
| Strand | - |
| Gene length (bp) | 1153 |
| Transcript length (bp) | 972 |
| Coding sequence length (bp) | 972 |
| Protein length (aa) | 324 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 27 | 49 | 22 |
| 2 | 54 | 76 | 22 |
| 3 | 91 | 113 | 22 |
| 4 | 120 | 142 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 233 | 255 | 22 |
| 7 | 265 | 287 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7014 MSADAVSSLVARATCPVQGNGDLYGLGIRIGLYLQMLTVQLSGMLSVYFRVEDHIGQGTIVFVLSTLIVLVRLVD ASIRGVNGSSDTDPAIEPVEVFPVLTLLLIQVGVCRVSSRNSMTMLIWMAELVGLTIMYNYFWWRGMDLMPRSCP DDKAFFFAQVSIWGWFRSLNKAGAVVTAIATSMTVIAYCGSVLYYVAIVIVRFLQRRSNDHAAPGDGGDGNDQRS LTLGSVDLLANVGAIVYVELALKWNGITGVHTLDSPGQFMPFFIALAQFLSVFYSALKYVLLQYADEHALDDEDD STLECHHENKGRYIRGDTEDIPL* |
| Coding | >Hirsu2|7014 ATGTCCGCCGACGCCGTCTCGAGCCTGGTGGCGCGGGCCACGTGCCCCGTCCAGGGCAACGGCGACCTGTACGGC TTGGGCATCCGCATCGGGCTCTATCTTCAGATGCTCACGGTCCAGCTGTCGGGCATGCTGAGCGTCTACTTCCGG GTCGAGGACCACATCGGGCAGGGAACCATCGTCTTCGTCCTTTCGACCCTCATCGTCCTCGTGCGGCTCGTCGAC GCCAGCATTCGCGGCGTCAATGGTTCGAGCGATACCGATCCCGCCATCGAGCCCGTCGAGGTCTTCCCCGTCCTG ACACTGCTCCTCATCCAGGTCGGCGTCTGCAGGGTGTCGTCGCGGAACAGCATGACCATGCTGATCTGGATGGCC GAGCTGGTCGGCCTCACCATCATGTACAACTATTTCTGGTGGCGAGGCATGGACCTCATGCCGCGCTCCTGCCCG GACGACAAGGCCTTCTTCTTCGCCCAGGTCAGCATCTGGGGCTGGTTCCGGAGCTTGAACAAGGCGGGCGCCGTC GTGACCGCCATCGCCACCTCCATGACCGTCATCGCCTATTGCGGCTCCGTCCTCTACTACGTCGCCATTGTCATC GTCAGATTCCTGCAGAGGCGAAGCAACGATCATGCGGCGCCCGGAGACGGCGGCGACGGCAACGACCAACGCAGC CTGACGCTCGGTTCCGTCGACCTGCTGGCCAACGTCGGCGCCATCGTCTACGTCGAGCTGGCGCTCAAGTGGAAC GGCATCACGGGCGTCCACACACTCGACAGCCCCGGCCAGTTCATGCCCTTTTTCATCGCGCTCGCCCAGTTCCTC AGCGTCTTCTATTCCGCGCTCAAGTACGTGCTCCTGCAGTACGCGGACGAGCACGCGCTGGACGACGAGGACGAC TCGACTCTTGAATGCCACCACGAGAACAAGGGCCGTTACATCAGAGGCGACACCGAAGACATTCCGCTCTAA |
| Transcript | >Hirsu2|7014 ATGTCCGCCGACGCCGTCTCGAGCCTGGTGGCGCGGGCCACGTGCCCCGTCCAGGGCAACGGCGACCTGTACGGC TTGGGCATCCGCATCGGGCTCTATCTTCAGATGCTCACGGTCCAGCTGTCGGGCATGCTGAGCGTCTACTTCCGG GTCGAGGACCACATCGGGCAGGGAACCATCGTCTTCGTCCTTTCGACCCTCATCGTCCTCGTGCGGCTCGTCGAC GCCAGCATTCGCGGCGTCAATGGTTCGAGCGATACCGATCCCGCCATCGAGCCCGTCGAGGTCTTCCCCGTCCTG ACACTGCTCCTCATCCAGGTCGGCGTCTGCAGGGTGTCGTCGCGGAACAGCATGACCATGCTGATCTGGATGGCC GAGCTGGTCGGCCTCACCATCATGTACAACTATTTCTGGTGGCGAGGCATGGACCTCATGCCGCGCTCCTGCCCG GACGACAAGGCCTTCTTCTTCGCCCAGGTCAGCATCTGGGGCTGGTTCCGGAGCTTGAACAAGGCGGGCGCCGTC GTGACCGCCATCGCCACCTCCATGACCGTCATCGCCTATTGCGGCTCCGTCCTCTACTACGTCGCCATTGTCATC GTCAGATTCCTGCAGAGGCGAAGCAACGATCATGCGGCGCCCGGAGACGGCGGCGACGGCAACGACCAACGCAGC CTGACGCTCGGTTCCGTCGACCTGCTGGCCAACGTCGGCGCCATCGTCTACGTCGAGCTGGCGCTCAAGTGGAAC GGCATCACGGGCGTCCACACACTCGACAGCCCCGGCCAGTTCATGCCCTTTTTCATCGCGCTCGCCCAGTTCCTC AGCGTCTTCTATTCCGCGCTCAAGTACGTGCTCCTGCAGTACGCGGACGAGCACGCGCTGGACGACGAGGACGAC TCGACTCTTGAATGCCACCACGAGAACAAGGGCCGTTACATCAGAGGCGACACCGAAGACATTCCGCTCTAA |
| Gene | >Hirsu2|7014 ATGTCCGCCGACGCCGTCTCGAGCCTGGTGGCGCGGGCCACGTGCCCCGTCCAGGGCAACGGCGACCTGTACGGC TTGGGCATCCGCATCGGGCTCTATCTTCAGATGCTCACGGTCCAGCTGTCGGGCATGCTGAGCGTCTACTTCCGG GTCGAGGACCACATCGGGCAGGGAACCATCGTCTTCGTCCTTTCGACCCTCATCGTCCTCGTGCGGCTCGTCGAC GCCAGCATTCGCGGCGTCAATGGTTCGAGCGATACCGATCCCGCCATCGAGCCCGTCGAGGTCTTCCCCGTCCTG ACACTGCTCCTCATCCAGGTCGGCGTCTGCAGGGTGTCGTCGCGGAACAGCATGACCATGCTGATCTGGATGGCC GAGCTGGTCGGCCTCACCATCATGTACAACTATTTCTGGTGGCGAGGCATGGACCTCATGCCGCGCTCCTGCCCG GACGACAAGGCCTTCTTCTTCGCCCAGGTCAGCATCTGGGGCTGGTTCCGGAGCTTGAACAAGGCGGGCGCCGTC GTGACCGCCATCGCCACCTCCATGACCGTCATCGCCTATTGCGGCTGTAAGTCGTCCTCCATGTGCATCGGGTGT GTCGTGGGGAGAGGCGAACGACATGCTGAACCGTCCGAGCGGCGACAGCCGTCCTCTACTACGTCGCCATTGTCA TCGTCAGATTCCTGCAGAGGCGAAGCAACGATCATGCGGCGCCCGGAGACGGCGGCGACGGCAACGACCAACGCA GCCTGACGCTCGGTTCCGTCGACCTGCTGGCCAACGTCGGCGCCATCGTCTACGTCGAGCTGGCGCTCAAGTGGA ACGGCATCACGGGCGTCCACACACTCGACAGCCCCGGCCAGTTCATGCCCTTTTTCATCGCGCTCGCCCAGTTCC TCAGCGTCTTCTATTCCGCGCTCAAGTACGTGCTCCTGCAGTACGCGGACGAGCACGCGCTGGACGACGAGGACG GTGAGTCGGCCGAGATTTCCTGGTCCTTATGTCCTTGGGGAGAGAGCGGGTCAGCAGCGACCATTCACGCGCAGG ATGCTAATTGAGGGACCACTGTGGCACAGACTCGACTCTTGAATGCCACCACGAGAACAAGGGCCGTTACATCAG AGGCGACACCGAAGACATTCCGCTCTAA |