Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7013
Gene name
LocationContig_388:169..1348
Strand-
Gene length (bp)1179
Transcript length (bp)1062
Coding sequence length (bp)1062
Protein length (aa) 354

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 1.2E-14 39 336

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q99289|HLT_VIBPA Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2 33 289 4.0E-07

GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7013
MLTLLRPAILLAVVAAAATAAPQAAQAPEIRGPFRMQNLVTFGDSYTDEGRYDHFEKNHEAPPEGRPLFPSNKTF
SGGYAWPHFVANFSGARTYNYAVGGAMCSYDLIHRTLDATQGPFPDVLDYQVPAFKKDAAYWYLYPEHRPDNTVY
ALWIGTNDLGPDGFLDNKQQPGQTIDDFVECAWRVFDQLYAFGGRRFVLFNMLPLESAPMYAAPATSGRGNTIYW
RDPAAYDVAAYVERMRLATVEVNAKLRDDMPVQVQESHRWPDADVTLLDAHAIFTDVLAQPDAYLDAPADVTTPK
RVCLDQCVESPNPLSSFMWYDELHPAEKMEQILSQSFNNNIHGRDMYGTTYRG*
Coding >Hirsu2|7013
ATGCTGACGCTCCTCCGCCCTGCCATCCTCCTGGCCGTCGTCGCGGCGGCGGCGACGGCGGCGCCGCAGGCAGCG
CAGGCGCCCGAAATCCGCGGCCCGTTCCGGATGCAGAACCTGGTGACATTCGGCGACAGCTACACGGACGAGGGC
CGGTACGACCACTTCGAGAAGAACCACGAGGCGCCGCCCGAGGGCCGGCCGCTGTTCCCGAGCAACAAGACGTTC
AGCGGCGGCTACGCCTGGCCGCACTTCGTCGCCAACTTCTCGGGGGCGCGGACCTACAACTACGCCGTGGGCGGC
GCCATGTGCTCTTACGACCTCATCCACCGCACCCTCGACGCCACCCAGGGGCCCTTCCCGGACGTGCTCGACTAC
CAGGTGCCGGCCTTCAAGAAGGACGCGGCCTACTGGTACCTATACCCGGAGCACCGGCCCGACAACACCGTCTAC
GCCCTCTGGATCGGCACCAACGACCTCGGCCCGGACGGCTTCCTCGACAACAAGCAGCAGCCCGGCCAGACTATT
GACGACTTCGTCGAGTGCGCCTGGCGCGTCTTCGACCAGCTCTACGCCTTCGGCGGCCGCCGCTTCGTCCTGTTC
AACATGCTGCCGCTCGAGTCGGCGCCCATGTACGCTGCGCCCGCCACCAGCGGCCGCGGCAACACCATCTACTGG
CGCGACCCGGCCGCCTACGACGTCGCCGCCTACGTCGAGCGCATGCGCCTCGCCACCGTCGAGGTCAACGCCAAG
CTGCGCGACGACATGCCCGTCCAGGTCCAGGAGTCCCACCGCTGGCCCGACGCCGACGTCACCCTCCTCGACGCC
CACGCCATCTTCACCGACGTCCTCGCCCAGCCGGACGCCTACCTGGACGCGCCGGCCGACGTCACGACGCCTAAG
CGCGTCTGCCTCGACCAGTGCGTCGAGTCGCCCAACCCGCTGTCCAGCTTCATGTGGTACGACGAGCTGCATCCT
GCCGAGAAGATGGAGCAGATCCTTTCGCAGTCCTTCAACAACAACATCCACGGCCGCGACATGTACGGTACGACG
TACCGGGGCTGA
Transcript >Hirsu2|7013
ATGCTGACGCTCCTCCGCCCTGCCATCCTCCTGGCCGTCGTCGCGGCGGCGGCGACGGCGGCGCCGCAGGCAGCG
CAGGCGCCCGAAATCCGCGGCCCGTTCCGGATGCAGAACCTGGTGACATTCGGCGACAGCTACACGGACGAGGGC
CGGTACGACCACTTCGAGAAGAACCACGAGGCGCCGCCCGAGGGCCGGCCGCTGTTCCCGAGCAACAAGACGTTC
AGCGGCGGCTACGCCTGGCCGCACTTCGTCGCCAACTTCTCGGGGGCGCGGACCTACAACTACGCCGTGGGCGGC
GCCATGTGCTCTTACGACCTCATCCACCGCACCCTCGACGCCACCCAGGGGCCCTTCCCGGACGTGCTCGACTAC
CAGGTGCCGGCCTTCAAGAAGGACGCGGCCTACTGGTACCTATACCCGGAGCACCGGCCCGACAACACCGTCTAC
GCCCTCTGGATCGGCACCAACGACCTCGGCCCGGACGGCTTCCTCGACAACAAGCAGCAGCCCGGCCAGACTATT
GACGACTTCGTCGAGTGCGCCTGGCGCGTCTTCGACCAGCTCTACGCCTTCGGCGGCCGCCGCTTCGTCCTGTTC
AACATGCTGCCGCTCGAGTCGGCGCCCATGTACGCTGCGCCCGCCACCAGCGGCCGCGGCAACACCATCTACTGG
CGCGACCCGGCCGCCTACGACGTCGCCGCCTACGTCGAGCGCATGCGCCTCGCCACCGTCGAGGTCAACGCCAAG
CTGCGCGACGACATGCCCGTCCAGGTCCAGGAGTCCCACCGCTGGCCCGACGCCGACGTCACCCTCCTCGACGCC
CACGCCATCTTCACCGACGTCCTCGCCCAGCCGGACGCCTACCTGGACGCGCCGGCCGACGTCACGACGCCTAAG
CGCGTCTGCCTCGACCAGTGCGTCGAGTCGCCCAACCCGCTGTCCAGCTTCATGTGGTACGACGAGCTGCATCCT
GCCGAGAAGATGGAGCAGATCCTTTCGCAGTCCTTCAACAACAACATCCACGGCCGCGACATGTACGGTACGACG
TACCGGGGCTGA
Gene >Hirsu2|7013
ATGCTGACGCTCCTCCGCCCTGCCATCCTCCTGGCCGTCGTCGCGGCGGCGGCGACGGCGGCGCCGCAGGCAGCG
CAGGCGCCCGAAATCCGCGGCCCGTTCCGGATGCAGAACCTGGTGACATTCGGCGACAGCTACACGGACGAGGGC
CGGTACGACCACTTCGAGAAGAACCACGAGGCGCCGCCCGAGGGCCGGCCGCTGTTCCCGAGCAACAAGACGTTC
AGCGGCGGCTACGCCTGGCCGCACTTCGTCGCCAACTTCTCGGGGGCGCGGACCTACAACTACGCCGTGGGCGGC
GCCATGTGCTCTTACGACCTCATCCACCGCACCCTCGACGCCACCCAGGGGCCCTTCCCGGACGTGCTCGACTAC
CAGGTGCCGGCCTTCAAGAAGGACGCGGCCTACTGGTACCTATACCCGGAGCACCGGCCCGACAACACCGTCTAC
GCCCTCTGGATCGGCACCAACGACCTCGGCCCGGACGGCTTCCTCGACAACAAGCAGCAGCCCGGCCAGACTATT
GACGACTTCGTCGAGTGCGCCTGGCGCGTCTTCGACCAGCTCTACGCCTTCGGCGGCCGCCGCTTCGTCCTGTTC
AACATGCTGCCGCTCGAGTCGGCGCCCATGTACGCTGCGCCCGCCACCAGCGGCCGCGGCAACACCATCTACTGG
CGCGACCCGGCCGCCTACGACGTCGCCGCCTACGTCGAGCGCATGCGCCTCGCCACCGTCGAGGTCAACGCCAAG
CTGCGCGACGACATGCCCGTCCAGGTCCAGGAGTCCCACCGCTGGCCCGACGCCGACGTCACCCTCCTCGACGCC
CACGCCATCTTCACCGACGTCCTCGCCCAGCCGGACGCCTACCTGGACGCGCCGGCCGACGTCACGACGCCTAAG
CGCGTCTGCCTCGACCAGTGCGTCGAGTCGCCCAACCCGCTGTCCAGCTTCATGTGGTGAGTCCTTTCCCGACCC
CCTTTCGGCGGGAGGGGGAAACGATGCGGTCGCCGCGGCCGAGTCCGCCCCGTCCGTCAGGCTCGCCTCCGGCTA
ACAGGCTCTCGTCCCGCGCCCAGGTACGACGAGCTGCATCCTGCCGAGAAGATGGAGCAGATCCTTTCGCAGTCC
TTCAACAACAACATCCACGGCCGCGACATGTACGGTACGACGTACCGGGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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