© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7011 |
| Gene name | |
| Location | Contig_387:14865..16152 |
| Strand | + |
| Gene length (bp) | 1287 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 49 | 68 | 19 |
| 3 | 72 | 91 | 19 |
| 4 | 112 | 134 | 22 |
| 5 | 158 | 180 | 22 |
| 6 | 193 | 215 | 22 |
| 7 | 225 | 247 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7011 MGSSDVPPASAPSWLVPASTGLLGGGVFFWLACYILMARRSLATNDTPIPLMALGVNLAWEVVYAFYVTEEFLEF AGFIMWLVFDIPVLYATIKTAPRSFASSPLVARNTPLLLAVVFGFGLVANGVFAFWWLQEPHRGHGSKLGKTWKG LEARDTTELAWWSAGVAQMLMSVSALAMLLQRGHSGGQSYTIWLCRFIGTQLGLPGSCLLLWWYWPEAHGFVFQP LSIIIMGTSIICDVAYPFLLAHVRSTERILRDGTIVLGDYPPVRDKKRD* |
| Coding | >Hirsu2|7011 ATGGGCTCGTCGGACGTCCCTCCGGCGTCGGCGCCCTCGTGGCTCGTCCCGGCCTCGACGGGCCTCCTCGGCGGC GGCGTCTTCTTCTGGCTCGCCTGCTACATCCTCATGGCGCGCCGCTCGCTGGCCACGAACGACACGCCCATCCCG CTGATGGCCCTGGGCGTCAATCTGGCGTGGGAGGTCGTGTATGCCTTCTACGTCACCGAGGAGTTTCTCGAATTC GCCGGCTTCATCATGTGGCTCGTCTTCGACATCCCCGTCCTCTACGCCACCATCAAAACCGCTCCGCGCTCCTTT GCCTCGTCGCCTCTGGTCGCCCGCAATACGCCGCTGCTCCTGGCCGTCGTTTTCGGCTTTGGACTCGTGGCCAAC GGGGTTTTCGCCTTCTGGTGGCTCCAAGAGCCGCATCGTGGCCACGGCTCCAAGCTCGGCAAGACGTGGAAGGGC CTTGAGGCGCGGGATACGACCGAGTTGGCCTGGTGGTCTGCTGGCGTTGCGCAGATGCTCATGAGTGTCAGCGCT CTCGCGATGCTTCTGCAACGTGGGCATTCTGGTGGTCAGAGCTATACCATTTGGCTTTGCCGGTTTATCGGGACC CAGCTTGGGCTTCCGGGTTCGTGTCTCCTCCTGTGGTGGTATTGGCCGGAAGCTCATGGCTTCGTGTTCCAACCC CTATCCATCATCATCATGGGCACGTCCATCATCTGCGACGTGGCATACCCGTTTCTTCTCGCCCACGTCAGGTCC ACCGAACGCATCCTCCGTGACGGAACGATAGTGTTAGGGGACTATCCACCGGTGAGAGACAAGAAACGAGACTGA |
| Transcript | >Hirsu2|7011 ATGGGCTCGTCGGACGTCCCTCCGGCGTCGGCGCCCTCGTGGCTCGTCCCGGCCTCGACGGGCCTCCTCGGCGGC GGCGTCTTCTTCTGGCTCGCCTGCTACATCCTCATGGCGCGCCGCTCGCTGGCCACGAACGACACGCCCATCCCG CTGATGGCCCTGGGCGTCAATCTGGCGTGGGAGGTCGTGTATGCCTTCTACGTCACCGAGGAGTTTCTCGAATTC GCCGGCTTCATCATGTGGCTCGTCTTCGACATCCCCGTCCTCTACGCCACCATCAAAACCGCTCCGCGCTCCTTT GCCTCGTCGCCTCTGGTCGCCCGCAATACGCCGCTGCTCCTGGCCGTCGTTTTCGGCTTTGGACTCGTGGCCAAC GGGGTTTTCGCCTTCTGGTGGCTCCAAGAGCCGCATCGTGGCCACGGCTCCAAGCTCGGCAAGACGTGGAAGGGC CTTGAGGCGCGGGATACGACCGAGTTGGCCTGGTGGTCTGCTGGCGTTGCGCAGATGCTCATGAGTGTCAGCGCT CTCGCGATGCTTCTGCAACGTGGGCATTCTGGTGGTCAGAGCTATACCATTTGGCTTTGCCGGTTTATCGGGACC CAGCTTGGGCTTCCGGGTTCGTGTCTCCTCCTGTGGTGGTATTGGCCGGAAGCTCATGGCTTCGTGTTCCAACCC CTATCCATCATCATCATGGGCACGTCCATCATCTGCGACGTGGCATACCCGTTTCTTCTCGCCCACGTCAGGTCC ACCGAACGCATCCTCCGTGACGGAACGATAGTGTTAGGGGACTATCCACCGGTGAGAGACAAGAAACGAGACTGA |
| Gene | >Hirsu2|7011 ATGGGCTCGTCGGACGTCCCTCCGGCGTCGGCGCCCTCGTGGCTCGTCCCGGCCTCGACGGGCCTCCTCGGCGGC GGCGTCTTCTTCTGGCTCGCCTGCTACATCCTCATGGCGCGCCGCTCGCTGGCCACGAACGACACGCCCATCCCG CTGATGGCCCTGGGCGTCAATCTGGCGTGGGAGGTCGTGTATGCCTTCTACGTCACCGAGGAGTTTCTCGAATTC GCCGGCTTCATCATGTGGCTCGTCTTCGACATCCCCGTCCTCTACGCCACCATCAAAACCGCTCCGCGCTCCTTT GCCTCGTCGCCTCTGGTCGCCCGCAATACGCCGCTGCTCCTGGCCGTCGTTTTCGGCTTTGGACTCGTGGCCAAC GGGGTTTTCGCCTTCTGGTGGCTCCAAGAGCCGCATCGTGGCCACGGCTCCAAGCTCGGCAAGACGTGGAAGGGC CTTGAGGCGCGGGATACGACCGAGTTGGCCTGGTGGTCTGCTGGCGTTGCGCAGATGCTCATGAGTGTCAGCGCT CTCGCGATGCTTCTGCAACGTGGGCATTCTGGTGGTCAGAGCTATACCATTTGGTGAGTCCCACCCTCTCCCTTG CTCTACCCCTTCCTTCTTTCTCTATCCCTCTCTTCTGTATATGCATACGGCTCTACGGCTTCGAGATGTAAATTA TCGGACGGTTATATTTCACGTGCGCCTTGTATTCTTTCAAAAAGTAGATGATCCCTCGACTTCACACGATACTTT TCCGATGGAGTCTCGAATATCACTCTCGTTCTGCCTCTTTGGCTGCCCTCCCGCATGGCTGCAAGGATCAACTGC CCGGGATGACACCAGGCGCTGGAACTGAAAGCCAAAAAGGGGGGGAGGGGGACGTGGGGAGCAAAGAAAAATTTC GAACGGGTTCCCTGACGTGCGATGATATGCTTTTGTGTCAACTCCGTTACATCCATGAGACGCTGGCGGGATTTT TTTGAGCCACAAGCGCATAACTGGGGGAATTTCCGCTGACCTGGACTCACCCTTGACATCTATAGGCTTTGCCGG TTTATCGGGACCCAGCTTGGGCTTCCGGGTTCGTGTCTCCTCCTGTGGTGGTATTGGCCGGAAGCTCATGGCTTC GTGTTCCAACCCCTATCCATCATCATCATGGGCACGTCCATCATCTGCGACGTGGCATACCCGTTTCTTCTCGCC CACGTCAGGTCCACCGAACGCATCCTCCGTGACGGAACGATAGTGTTAGGGGACTATCCACCGGTGAGAGACAAG AAACGAGACTGA |