Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7008
Gene name
LocationContig_387:142..961
Strand+
Gene length (bp)819
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10032 Pho88 Phosphate transport (Pho88) 5.8E-83 4 188

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38264|PHO88_YEAST Inorganic phosphate transport protein PHO88 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO88 PE=1 SV=1 4 192 3.0E-60
sp|Q9HDZ8|YKP6_SCHPO Uncharacterized protein C589.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.06c PE=1 SV=1 4 163 2.0E-46
sp|O42940|PHO88_SCHPO Inorganic phosphate transport protein pho88 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pho88 PE=3 SV=2 5 182 5.0E-38

GO

GO Term Description Terminal node
GO:0005783 endoplasmic reticulum Yes
GO:0045047 protein targeting to ER Yes
GO:0043227 membrane-bounded organelle No
GO:0071702 organic substance transport No
GO:0034613 cellular protein localization No
GO:0070727 cellular macromolecule localization No
GO:0044424 intracellular part No
GO:0051234 establishment of localization No
GO:0042886 amide transport No
GO:0072594 establishment of protein localization to organelle No
GO:0044444 cytoplasmic part No
GO:0044464 cell part No
GO:0015031 protein transport No
GO:0043231 intracellular membrane-bounded organelle No
GO:0051179 localization No
GO:0046907 intracellular transport No
GO:0033036 macromolecule localization No
GO:0006605 protein targeting No
GO:0043229 intracellular organelle No
GO:0008104 protein localization No
GO:0006810 transport No
GO:0051641 cellular localization No
GO:0072599 establishment of protein localization to endoplasmic reticulum No
GO:0008150 biological_process No
GO:0070972 protein localization to endoplasmic reticulum No
GO:0033365 protein localization to organelle No
GO:0071705 nitrogen compound transport No
GO:0015833 peptide transport No
GO:0043226 organelle No
GO:0045184 establishment of protein localization No
GO:0006886 intracellular protein transport No
GO:0051649 establishment of localization in cell No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7008
MAGLSPQITNLIIILGMMQVSKRIPFDDPTVLTAVRGLYIASNLLIAALYLYIQTRINKNKDMTTLKYVEPPPMG
STEEGKLVTTTVHAYDLQQLRTAFRGQLMGIAMMAFMHVYMKYTNPLLIQSIIPVKSALEGNLVKIYLYGQPATG
DLKRPFKQAQGFMSAMQNGQAQSDKKAIEAAEKAGRGGVKEE*
Coding >Hirsu2|7008
ATGGCTGGACTCAGTCCCCAGATCACCAACCTGATCATCATCCTCGGCATGATGCAGGTGTCGAAACGGATCCCC
TTCGACGACCCCACCGTCCTGACCGCCGTGCGCGGGCTCTACATCGCCAGCAACCTCCTCATCGCCGCCCTGTAC
CTTTACATCCAGACGCGCATCAACAAGAACAAGGATATGACGACGCTCAAGTACGTCGAGCCCCCGCCCATGGGC
TCCACCGAGGAGGGCAAGCTCGTGACGACGACGGTGCACGCCTACGACCTGCAGCAGCTGCGGACCGCCTTCCGC
GGCCAGCTGATGGGCATCGCCATGATGGCCTTTATGCACGTCTACATGAAGTACACCAACCCACTGCTGATCCAG
AGCATCATCCCCGTCAAGAGCGCGCTCGAGGGCAACTTGGTCAAGATCTACCTCTACGGCCAGCCCGCCACCGGC
GACCTCAAGCGGCCCTTCAAGCAGGCCCAGGGCTTCATGAGCGCCATGCAGAACGGCCAGGCCCAGAGCGACAAG
AAGGCCATCGAGGCCGCCGAGAAGGCCGGCCGCGGCGGCGTCAAGGAGGAATAA
Transcript >Hirsu2|7008
ATGGCTGGACTCAGTCCCCAGATCACCAACCTGATCATCATCCTCGGCATGATGCAGGTGTCGAAACGGATCCCC
TTCGACGACCCCACCGTCCTGACCGCCGTGCGCGGGCTCTACATCGCCAGCAACCTCCTCATCGCCGCCCTGTAC
CTTTACATCCAGACGCGCATCAACAAGAACAAGGATATGACGACGCTCAAGTACGTCGAGCCCCCGCCCATGGGC
TCCACCGAGGAGGGCAAGCTCGTGACGACGACGGTGCACGCCTACGACCTGCAGCAGCTGCGGACCGCCTTCCGC
GGCCAGCTGATGGGCATCGCCATGATGGCCTTTATGCACGTCTACATGAAGTACACCAACCCACTGCTGATCCAG
AGCATCATCCCCGTCAAGAGCGCGCTCGAGGGCAACTTGGTCAAGATCTACCTCTACGGCCAGCCCGCCACCGGC
GACCTCAAGCGGCCCTTCAAGCAGGCCCAGGGCTTCATGAGCGCCATGCAGAACGGCCAGGCCCAGAGCGACAAG
AAGGCCATCGAGGCCGCCGAGAAGGCCGGCCGCGGCGGCGTCAAGGAGGAATAA
Gene >Hirsu2|7008
ATGGCTGGACTCAGTCCCCAGATGTAAGGCGCCGGTGAAGGGGGCGCTGGTGGCGTCGCTGCTGACGCGCAAACG
CTCCAGCACCAACCTGATCATCATCCTCGGCATGATGCAGGTGTCGAAACGGATCCCCTTCGACGACCCCACCGT
CCTGACCGCCGTGCGCGGGCTCTACATCGCCAGCAACCTCCTCATCGCCGCCCTGTACCTTTACATCCAGACGCG
CATCAACAAGAACAAGGGCATGTGGCTACCGCGCTCTCTCTCTCGCTCTCCCTACCGCGACCACCATCACCCCTT
TTGCATCCTCCCCCACTCGCCTCCTCTCCTTTTTCTTCTCCGCCGGGAACTGCTCTTGATATGACCTCGCCCGCT
GACCAAATCCGCCCCTGGAGCGATGCTCCTCCCCGCGAGAAATATATAGATATGACGACGCTCAAGTACGTCGAG
CCCCCGCCCATGGGCTCCACCGAGGAGGGCAAGCTCGTGACGACGACGGTGCACGCCTACGACCTGCAGCAGCTG
CGGACCGCCTTCCGCGGCCAGCTGATGGGCATCGCCATGATGGCCTTTATGCACGTCTACATGAAGTACACCAAC
CCACTGCTGATCCAGAGCATCATCCCCGTCAAGAGCGCGCTCGAGGGCAACTTGGTCAAGATCTACCTCTACGGC
CAGCCCGCCACCGGCGACCTCAAGCGGCCCTTCAAGCAGGCCCAGGGCTTCATGAGCGCCATGCAGAACGGCCAG
GCCCAGAGCGACAAGAAGGCCATCGAGGCCGCCGAGAAGGCCGGCCGCGGCGGCGTCAAGGAGGAATAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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