Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6986
Gene name
LocationContig_384:377..1266
Strand+
Gene length (bp)889
Transcript length (bp)675
Coding sequence length (bp)675
Protein length (aa) 225

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 54 76 22
3 88 110 22
4 181 203 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6986
MPNRIFLAALVADVVFLATGCLELGFSLVVRSIMFNSPDDGQEAVRNLLYQDFPLTAGIVNAGFILAASVFTLIG
LASPMRAWLKASGYLVAFCGLFTLCIGVALWVSTLKIKDSFFPTYVRQDPAVQQLIQESFSCCGYFNHTTPAFVT
DDVCPSPAAAALLRGCATAISSFGNIFIDNIFTAVFGMVGIDAIFILTIACLLKDRKECERYRHIDEKSGFRQF*
Coding >Hirsu2|6986
ATGCCGAACCGGATCTTCCTGGCGGCGCTGGTGGCCGACGTCGTCTTCCTGGCGACGGGCTGCCTCGAGCTCGGC
TTCTCGCTCGTCGTGCGCAGCATCATGTTCAACAGCCCCGACGACGGGCAGGAGGCGGTCCGCAACCTGCTGTAC
CAGGACTTCCCGCTGACGGCCGGCATCGTCAACGCCGGCTTCATCCTCGCCGCCTCCGTCTTCACCCTCATCGGC
CTCGCGTCGCCCATGCGCGCCTGGCTCAAGGCCAGCGGCTACCTCGTCGCCTTCTGCGGCCTCTTCACCCTCTGC
ATCGGCGTCGCCCTCTGGGTCTCCACCCTCAAGATCAAGGACTCCTTCTTCCCCACCTACGTCCGCCAGGACCCG
GCCGTCCAGCAGCTGATCCAGGAATCGTTCTCGTGTTGCGGCTACTTCAACCACACCACGCCCGCCTTCGTCACC
GACGACGTCTGCCCCAGCCCCGCCGCCGCCGCCCTCCTCCGCGGCTGCGCCACCGCCATCTCCAGCTTCGGCAAC
ATCTTCATCGACAACATCTTCACCGCCGTCTTCGGCATGGTCGGCATCGACGCCATCTTCATCCTCACCATCGCC
TGCCTGCTCAAGGATCGCAAGGAGTGCGAGCGATACCGCCACATCGACGAGAAGAGCGGCTTCCGCCAGTTCTAG
Transcript >Hirsu2|6986
ATGCCGAACCGGATCTTCCTGGCGGCGCTGGTGGCCGACGTCGTCTTCCTGGCGACGGGCTGCCTCGAGCTCGGC
TTCTCGCTCGTCGTGCGCAGCATCATGTTCAACAGCCCCGACGACGGGCAGGAGGCGGTCCGCAACCTGCTGTAC
CAGGACTTCCCGCTGACGGCCGGCATCGTCAACGCCGGCTTCATCCTCGCCGCCTCCGTCTTCACCCTCATCGGC
CTCGCGTCGCCCATGCGCGCCTGGCTCAAGGCCAGCGGCTACCTCGTCGCCTTCTGCGGCCTCTTCACCCTCTGC
ATCGGCGTCGCCCTCTGGGTCTCCACCCTCAAGATCAAGGACTCCTTCTTCCCCACCTACGTCCGCCAGGACCCG
GCCGTCCAGCAGCTGATCCAGGAATCGTTCTCGTGTTGCGGCTACTTCAACCACACCACGCCCGCCTTCGTCACC
GACGACGTCTGCCCCAGCCCCGCCGCCGCCGCCCTCCTCCGCGGCTGCGCCACCGCCATCTCCAGCTTCGGCAAC
ATCTTCATCGACAACATCTTCACCGCCGTCTTCGGCATGGTCGGCATCGACGCCATCTTCATCCTCACCATCGCC
TGCCTGCTCAAGGATCGCAAGGAGTGCGAGCGATACCGCCACATCGACGAGAAGAGCGGCTTCCGCCAGTTCTAG
Gene >Hirsu2|6986
ATGCCGAACCGGATCTTCCTGGCGGCGCTGGTGGCCGACGTCGTCTTCCTGGCGACGGGCTGCCTCGAGCTCGGC
TTCTCGCTCGTCGTGCGCAGCATCATGTTCAACAGCCCCGACGACGGGCAGGAGGCGGTCCGCAACCTGCTGTAC
CAGGACTTCCCGCTGACGGCCGGCATCGTCAACGCCGGCTTCATCCTCGCCGCCTCCGTCTTCACCCTCATCGGC
CTCGCGTCGCCCATGCGCGCCTGGCTCAAGGCCAGCGGCTACCTCGTCGCCTTCTGCGGCCTCTTCACCCTCTGC
ATCGGCGTCGCCCTCTGGGTCTCCACCCTCAAGATCAAGGACTCCTTCTTCCCCACCTACGTCCGCCAGGACCCG
GCCGTCCAGCAGCTGATCCAGGAATCGGTACGCCTCCCGTCATCACCCTATCTACCCGCCTTAACCCAGCACGAG
AGAGAGACAGACCGACAAGAGAGACAGGGACAGAGAAAACAGAGACCGCTAACCCGTCGCCAGTTCTCGTGTTGC
GGCTACTTCAACCACACCACGCCCGCCTTCGTCACCGACGACGTCTGCCCCAGCCCCGCCGCCGCCGCCCTCCTC
CGCGGCTGCGCCACCGCCATCTCCAGCTTCGGCAACATCTTCATCGACAACATCTTCACCGCCGTCTTCGGCATG
GTCGGTCCGTTCTCCCCTCCCTCCCCACCTCTACTCCTCTCTCCCCCCTTCCAGAAGAGAGGGGAGAGACAAAAC
AAAAGCACGTGTCGCTCACAGCAGCTCCCCAGGCATCGACGCCATCTTCATCCTCACCATCGCCTGCCTGCTCAA
GGATCGCAAGGAGTGCGAGCGATACCGCCACATCGACGAGAAGAGCGGCTTCCGCCAGTTCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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