Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6928
Gene name
LocationContig_377:18757..20616
Strand+
Gene length (bp)1859
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01569 PAP2 PAP2 superfamily 1.2E-17 104 224

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 14 346 2.0E-66
sp|P47013|DS1P1_YEAST Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 2 344 2.0E-58
sp|P23501|DS1P2_YEAST Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 1 282 9.0E-48
sp|Q9M2G7|LPPD_ARATH Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 62 281 9.0E-23
sp|Q55A00|SSPA_DICDI Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 39 288 8.0E-16
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 14 346 2.0E-66
sp|P47013|DS1P1_YEAST Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 2 344 2.0E-58
sp|P23501|DS1P2_YEAST Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 1 282 9.0E-48
sp|Q9M2G7|LPPD_ARATH Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 62 281 9.0E-23
sp|Q55A00|SSPA_DICDI Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 39 288 8.0E-16
sp|Q8IWX5|SGPP2_HUMAN Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1 73 345 1.0E-14
sp|Q810K3|SGPP2_MOUSE Sphingosine-1-phosphate phosphatase 2 OS=Mus musculus GN=Sgpp2 PE=2 SV=1 73 347 3.0E-12
sp|Q99P55|SGPP1_RAT Sphingosine-1-phosphate phosphatase 1 OS=Rattus norvegicus GN=Sgpp1 PE=1 SV=2 9 212 1.0E-09
sp|Q9BX95|SGPP1_HUMAN Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2 69 358 2.0E-09
sp|Q9JI99|SGPP1_MOUSE Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus GN=Sgpp1 PE=1 SV=1 73 212 4.0E-09
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 72 94 22
2 98 117 19
3 198 220 22
4 235 254 19
5 267 284 17
6 304 326 22
7 515 537 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6928
MSNDARREDASPAKPKPDHVPDAGLRSLDHYKRALPPWRYALRQKMLPLIRWETPYLAAMQEKLRTPALDSYFAI
TANLGTHTFFMIGLPILFWCGYASFGKGLVHILALGVFWTGFTKDLFSLPRPLSPPLHRITMSGSAALEYGFPST
HSANAVSVAVYALLILHSPESRLSATAKLVLEALSYFYAASIVFGRLYCGMHGFLDIIVGSLTGAGIGWLEFSYG
PPLDAYMHSGTWLAPLLAGLVIVVLVRIHPEPADDCPCFDDSVAFAGVLIGLELGTWTYGKIPGDPWETHAHGDN
GLDVAPLGWWVIVARLALGILVIFLWRETMKPALLKLLPYLFRLLEHVGWSLPRRFFTPASEYKSVPPGSRLDTL
FPKASDFPRMVESIRHPTTRGRSVSIGPQSAADAYETLAYRERRRRESIDSGKPGPDLGGGQDEDRSGKGAQASG
AQKPAGVHEVHESDKVVGNGDAVEAPPADGGVAANGSCQPEAQELEEKEMFLRLVRPRVRYDVEVVTKLVVYAGI
ACFATALVPIMLELVGLGMSRQLEVQ*
Coding >Hirsu2|6928
ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC
AGGAGCCTCGACCACTACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCCCCCTGATC
CGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACTTTGCCATC
ACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACGCCTCGTTC
GGAAAGGGGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCG
CGGCCGCTGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACG
CACAGCGCCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCG
ACGGCCAAGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGC
ATGCACGGCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGC
CCGCCCCTGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTG
GTGCGGATCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATC
GGCCTGGAGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAAC
GGCCTCGACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTG
TGGCGCGAGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGG
AGCCTGCCGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTC
TTCCCCAAGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCG
ATCGGGCCGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGAC
AGCGGCAAGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGG
GCGCAGAAGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCG
CCGCCGGCGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATG
TTCCTGCGGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGGATC
GCCTGTTTCGCCACGGCCCTGGTGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTG
CAATGA
Transcript >Hirsu2|6928
ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC
AGGAGCCTCGACCACTACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCCCCCTGATC
CGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACTTTGCCATC
ACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACGCCTCGTTC
GGAAAGGGGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCG
CGGCCGCTGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACG
CACAGCGCCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCG
ACGGCCAAGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGC
ATGCACGGCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGC
CCGCCCCTGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTG
GTGCGGATCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATC
GGCCTGGAGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAAC
GGCCTCGACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTG
TGGCGCGAGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGG
AGCCTGCCGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTC
TTCCCCAAGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCG
ATCGGGCCGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGAC
AGCGGCAAGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGG
GCGCAGAAGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCG
CCGCCGGCGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATG
TTCCTGCGGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGGATC
GCCTGTTTCGCCACGGCCCTGGTGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTG
CAATGA
Gene >Hirsu2|6928
ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC
AGGAGCCTCGACCACTGTGAGTGCCGTCGCTGCCCTCGGCCTCGCATCTCCCTCGCTCGGCCCTGTCCTGGCTCC
CGGGTGCTGACGTCTGCCGGCCAGACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCC
CCCTGATCCGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACT
TTGCCATCACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACG
CCTCGTTCGGAAAGGGGTATGTTCCCGGCCGGCCTCGCTCGACGATGCCGAGGCGCGCGCTGACTGTACCTGCCA
GGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCGCGGCCGC
TGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACGCACAGCG
CCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCGACGGCCA
AGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGCATGCACG
GCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGCCCGCCCC
TGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTGGTGCGGA
TCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATCGGCCTGG
AGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAACGGCCTCG
ACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTGTGGCGCG
AGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGGAGCCTGC
CGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTCTTCCCCA
AGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCGATCGGGC
CGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGACAGCGGCA
AGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGGGCGCAGA
AGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCGCCGCCGG
CGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATGTTCCTGC
GGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGTGAGTCGAGAA
GGCGAGACAGGCTCGGTCCAGAGCCGGACAGGACTGACGCGCGTGCAGGGATCGCCTGTTTCGCCACGGCCCTGG
TGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTGCAATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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