© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6928 |
| Gene name | |
| Location | Contig_377:18757..20616 |
| Strand | + |
| Gene length (bp) | 1859 |
| Transcript length (bp) | 1656 |
| Coding sequence length (bp) | 1656 |
| Protein length (aa) | 552 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01569 | PAP2 | PAP2 superfamily | 3.7E-18 | 104 | 224 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6N5|DS1PP_SCHPO | Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 | 14 | 346 | 2.0E-66 |
| sp|P47013|DS1P1_YEAST | Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 | 2 | 344 | 2.0E-58 |
| sp|P23501|DS1P2_YEAST | Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 | 1 | 282 | 9.0E-48 |
| sp|Q9M2G7|LPPD_ARATH | Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 | 62 | 281 | 9.0E-23 |
| sp|Q55A00|SSPA_DICDI | Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 | 39 | 288 | 8.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6N5|DS1PP_SCHPO | Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 | 14 | 346 | 2.0E-66 |
| sp|P47013|DS1P1_YEAST | Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 | 2 | 344 | 2.0E-58 |
| sp|P23501|DS1P2_YEAST | Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 | 1 | 282 | 9.0E-48 |
| sp|Q9M2G7|LPPD_ARATH | Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 | 62 | 281 | 9.0E-23 |
| sp|Q55A00|SSPA_DICDI | Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 | 39 | 288 | 8.0E-16 |
| sp|Q8IWX5|SGPP2_HUMAN | Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1 | 73 | 345 | 1.0E-14 |
| sp|Q810K3|SGPP2_MOUSE | Sphingosine-1-phosphate phosphatase 2 OS=Mus musculus GN=Sgpp2 PE=2 SV=1 | 73 | 347 | 3.0E-12 |
| sp|Q99P55|SGPP1_RAT | Sphingosine-1-phosphate phosphatase 1 OS=Rattus norvegicus GN=Sgpp1 PE=1 SV=2 | 9 | 212 | 1.0E-09 |
| sp|Q9BX95|SGPP1_HUMAN | Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2 | 69 | 358 | 2.0E-09 |
| sp|Q9JI99|SGPP1_MOUSE | Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus GN=Sgpp1 PE=1 SV=1 | 73 | 212 | 4.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 72 | 94 | 22 |
| 2 | 98 | 117 | 19 |
| 3 | 198 | 220 | 22 |
| 4 | 235 | 254 | 19 |
| 5 | 267 | 284 | 17 |
| 6 | 304 | 326 | 22 |
| 7 | 515 | 537 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6928 MSNDARREDASPAKPKPDHVPDAGLRSLDHYKRALPPWRYALRQKMLPLIRWETPYLAAMQEKLRTPALDSYFAI TANLGTHTFFMIGLPILFWCGYASFGKGLVHILALGVFWTGFTKDLFSLPRPLSPPLHRITMSGSAALEYGFPST HSANAVSVAVYALLILHSPESRLSATAKLVLEALSYFYAASIVFGRLYCGMHGFLDIIVGSLTGAGIGWLEFSYG PPLDAYMHSGTWLAPLLAGLVIVVLVRIHPEPADDCPCFDDSVAFAGVLIGLELGTWTYGKIPGDPWETHAHGDN GLDVAPLGWWVIVARLALGILVIFLWRETMKPALLKLLPYLFRLLEHVGWSLPRRFFTPASEYKSVPPGSRLDTL FPKASDFPRMVESIRHPTTRGRSVSIGPQSAADAYETLAYRERRRRESIDSGKPGPDLGGGQDEDRSGKGAQASG AQKPAGVHEVHESDKVVGNGDAVEAPPADGGVAANGSCQPEAQELEEKEMFLRLVRPRVRYDVEVVTKLVVYAGI ACFATALVPIMLELVGLGMSRQLEVQ* |
| Coding | >Hirsu2|6928 ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC AGGAGCCTCGACCACTACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCCCCCTGATC CGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACTTTGCCATC ACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACGCCTCGTTC GGAAAGGGGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCG CGGCCGCTGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACG CACAGCGCCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCG ACGGCCAAGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGC ATGCACGGCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGC CCGCCCCTGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTG GTGCGGATCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATC GGCCTGGAGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAAC GGCCTCGACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTG TGGCGCGAGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGG AGCCTGCCGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTC TTCCCCAAGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCG ATCGGGCCGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGAC AGCGGCAAGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGG GCGCAGAAGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCG CCGCCGGCGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATG TTCCTGCGGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGGATC GCCTGTTTCGCCACGGCCCTGGTGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTG CAATGA |
| Transcript | >Hirsu2|6928 ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC AGGAGCCTCGACCACTACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCCCCCTGATC CGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACTTTGCCATC ACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACGCCTCGTTC GGAAAGGGGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCG CGGCCGCTGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACG CACAGCGCCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCG ACGGCCAAGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGC ATGCACGGCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGC CCGCCCCTGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTG GTGCGGATCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATC GGCCTGGAGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAAC GGCCTCGACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTG TGGCGCGAGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGG AGCCTGCCGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTC TTCCCCAAGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCG ATCGGGCCGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGAC AGCGGCAAGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGG GCGCAGAAGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCG CCGCCGGCGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATG TTCCTGCGGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGGATC GCCTGTTTCGCCACGGCCCTGGTGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTG CAATGA |
| Gene | >Hirsu2|6928 ATGAGCAACGACGCGCGACGCGAGGATGCTTCGCCCGCCAAGCCCAAGCCTGACCATGTTCCCGACGCGGGGCTC AGGAGCCTCGACCACTGTGAGTGCCGTCGCTGCCCTCGGCCTCGCATCTCCCTCGCTCGGCCCTGTCCTGGCTCC CGGGTGCTGACGTCTGCCGGCCAGACAAGAGGGCGCTGCCGCCGTGGCGCTACGCTCTGCGGCAGAAGATGCTCC CCCTGATCCGCTGGGAGACGCCCTACCTGGCGGCGATGCAGGAGAAACTGCGCACGCCGGCGCTCGACAGCTACT TTGCCATCACGGCCAACCTGGGCACGCACACCTTCTTCATGATCGGCCTGCCGATCCTGTTCTGGTGCGGATACG CCTCGTTCGGAAAGGGGTATGTTCCCGGCCGGCCTCGCTCGACGATGCCGAGGCGCGCGCTGACTGTACCTGCCA GGCTCGTCCACATCCTCGCCCTCGGCGTCTTCTGGACCGGCTTCACCAAGGACCTGTTCTCCCTGCCGCGGCCGC TGTCGCCGCCGCTGCACCGCATCACCATGTCGGGGTCGGCGGCGCTCGAGTACGGCTTCCCGTCGACGCACAGCG CCAACGCCGTCTCGGTCGCCGTCTATGCGCTCCTCATCCTGCACAGCCCCGAAAGCCGGCTCTCGGCGACGGCCA AGCTCGTCCTCGAGGCCCTGTCGTACTTTTACGCCGCCTCCATCGTCTTCGGCCGGCTGTACTGCGGCATGCACG GCTTCCTCGACATCATCGTCGGCTCGCTCACCGGCGCCGGCATCGGCTGGCTCGAGTTCAGCTACGGCCCGCCCC TGGACGCCTACATGCACTCGGGCACCTGGCTCGCGCCCCTGCTGGCCGGCCTGGTCATCGTCGTCCTGGTGCGGA TCCACCCGGAGCCGGCCGACGACTGCCCCTGCTTCGACGACAGCGTCGCCTTCGCCGGCGTGCTGATCGGCCTGG AGCTCGGCACGTGGACGTACGGCAAGATCCCCGGCGACCCGTGGGAGACGCACGCGCACGGCGACAACGGCCTCG ACGTGGCGCCGCTGGGCTGGTGGGTCATTGTGGCCAGGCTGGCGCTCGGCATCCTCGTCATCTTTTTGTGGCGCG AGACGATGAAGCCGGCGCTGCTGAAGCTGCTGCCGTACCTGTTCCGGCTGCTGGAGCACGTCGGCTGGAGCCTGC CGCGGCGCTTCTTCACGCCGGCCAGCGAGTACAAGTCGGTCCCGCCGGGGTCCCGGCTCGACACGCTCTTCCCCA AGGCGTCCGACTTCCCGCGCATGGTGGAGAGCATCCGCCACCCGACGACGCGCGGGCGGTCCGTCTCGATCGGGC CGCAGAGCGCGGCGGACGCGTACGAGACGCTGGCGTATCGGGAGCGGCGACGGCGCGAGAGCATCGACAGCGGCA AGCCGGGCCCCGACCTCGGCGGGGGCCAGGACGAGGACCGGTCCGGCAAGGGGGCGCAGGCGTCCGGGGCGCAGA AGCCGGCCGGTGTCCACGAGGTGCACGAGAGCGACAAGGTGGTGGGCAACGGCGATGCCGTCGAGGCGCCGCCGG CGGACGGGGGGGTCGCGGCCAACGGAAGCTGCCAGCCGGAGGCGCAGGAGCTGGAAGAGAAGGAGATGTTCCTGC GGCTGGTGAGGCCGCGGGTGAGGTACGACGTGGAGGTGGTGACGAAGCTGGTGGTGTATGCAGGTGAGTCGAGAA GGCGAGACAGGCTCGGTCCAGAGCCGGACAGGACTGACGCGCGTGCAGGGATCGCCTGTTTCGCCACGGCCCTGG TGCCCATCATGCTGGAGCTTGTCGGGCTGGGCATGAGCAGGCAGCTCGAGGTGCAATGA |