Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6916
Gene name
LocationContig_376:17755..18421
Strand-
Gene length (bp)666
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1326 0.0546 0.9524 0.0501 0.0595 0.0093 0.1992 0.1519 0.1312 0.0044

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999756

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5532
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4157
Ophiocordyceps camponoti-floridani Ophcf2|06155
Ophiocordyceps camponoti-rufipedis Ophun1|419
Ophiocordyceps kimflemingae Ophio5|4852
Ophiocordyceps subramaniannii Hirsu2|6916 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6916
MLLTSIREGLAAALALFVLGQASPTGDAKDQEVMLPDDAHATSTTLRYGHCYTIKNHLGEELGHQPVAWGYLRFG
SGNKRTTFRVCQSIGQCTMPHNSPYRQILWNRSRFWLYDIEGNDYSPQGSIVAANAQPFSSGGLMYPSASTARYF
VNFWGESTECSADARYLGNCPIKLRVDNLRDDKGLSIGTDKFLRVTTADNYINVTFTERECPENKDLSVEL*
Coding >Hirsu2|6916
ATGCTTCTGACTTCTATCAGGGAGGGCCTCGCGGCTGCCCTTGCCCTCTTTGTCCTTGGCCAAGCCTCACCCACT
GGCGATGCAAAGGACCAGGAGGTCATGCTCCCGGACGATGCCCATGCCACGTCGACGACGCTCCGATACGGCCAC
TGCTACACCATCAAGAATCACCTCGGAGAGGAGCTCGGCCACCAGCCCGTGGCTTGGGGCTACTTGAGGTTTGGA
AGCGGCAACAAGAGGACCACGTTCAGGGTATGCCAAAGCATTGGGCAGTGCACCATGCCCCATAATTCGCCTTAC
CGGCAGATCCTCTGGAATCGGTCCCGCTTCTGGCTCTACGATATCGAGGGCAACGACTACTCCCCCCAGGGATCG
ATCGTTGCCGCCAATGCCCAGCCCTTCAGCAGCGGTGGGCTTATGTACCCTTCTGCCAGCACGGCCCGCTACTTC
GTCAACTTTTGGGGAGAGAGCACCGAGTGCAGCGCGGATGCGCGTTACTTGGGCAACTGCCCCATCAAGCTGCGT
GTCGACAATCTTCGGGACGACAAGGGCTTGAGCATTGGGACTGACAAGTTCCTCCGAGTCACCACCGCAGACAAC
TACATCAACGTCACGTTCACCGAGAGGGAATGCCCCGAGAACAAGGATCTCAGCGTGGAGCTCTAA
Transcript >Hirsu2|6916
ATGCTTCTGACTTCTATCAGGGAGGGCCTCGCGGCTGCCCTTGCCCTCTTTGTCCTTGGCCAAGCCTCACCCACT
GGCGATGCAAAGGACCAGGAGGTCATGCTCCCGGACGATGCCCATGCCACGTCGACGACGCTCCGATACGGCCAC
TGCTACACCATCAAGAATCACCTCGGAGAGGAGCTCGGCCACCAGCCCGTGGCTTGGGGCTACTTGAGGTTTGGA
AGCGGCAACAAGAGGACCACGTTCAGGGTATGCCAAAGCATTGGGCAGTGCACCATGCCCCATAATTCGCCTTAC
CGGCAGATCCTCTGGAATCGGTCCCGCTTCTGGCTCTACGATATCGAGGGCAACGACTACTCCCCCCAGGGATCG
ATCGTTGCCGCCAATGCCCAGCCCTTCAGCAGCGGTGGGCTTATGTACCCTTCTGCCAGCACGGCCCGCTACTTC
GTCAACTTTTGGGGAGAGAGCACCGAGTGCAGCGCGGATGCGCGTTACTTGGGCAACTGCCCCATCAAGCTGCGT
GTCGACAATCTTCGGGACGACAAGGGCTTGAGCATTGGGACTGACAAGTTCCTCCGAGTCACCACCGCAGACAAC
TACATCAACGTCACGTTCACCGAGAGGGAATGCCCCGAGAACAAGGATCTCAGCGTGGAGCTCTAA
Gene >Hirsu2|6916
ATGCTTCTGACTTCTATCAGGGAGGGCCTCGCGGCTGCCCTTGCCCTCTTTGTCCTTGGCCAAGCCTCACCCACT
GGCGATGCAAAGGACCAGGAGGTCATGCTCCCGGACGATGCCCATGCCACGTCGACGACGCTCCGATACGGCCAC
TGCTACACCATCAAGAATCACCTCGGAGAGGAGCTCGGCCACCAGCCCGTGGCTTGGGGCTACTTGAGGTTTGGA
AGCGGCAACAAGAGGACCACGTTCAGGGTATGCCAAAGCATTGGGCAGTGCACCATGCCCCATAATTCGCCTTAC
CGGCAGATCCTCTGGAATCGGTCCCGCTTCTGGCTCTACGATATCGAGGGCAACGACTACTCCCCCCAGGGATCG
ATCGTTGCCGCCAATGCCCAGCCCTTCAGCAGCGGTGGGCTTATGTACCCTTCTGCCAGCACGGCCCGCTACTTC
GTCAACTTTTGGGGAGAGAGCACCGAGTGCAGCGCGGATGCGCGTTACTTGGGCAACTGCCCCATCAAGCTGCGT
GTCGACAATCTTCGGGACGACAAGGGCTTGAGCATTGGGACTGACAAGTTCCTCCGAGTCACCACCGCAGACAAC
TACATCAACGTCACGTTCACCGAGAGGGAATGCCCCGAGAACAAGGATCTCAGCGTGGAGCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail