Protein ID | Hirsu2|6903 |
Gene name | |
Location | Contig_375:875..2504 |
Strand | - |
Gene length (bp) | 1629 |
Transcript length (bp) | 1524 |
Coding sequence length (bp) | 1524 |
Protein length (aa) | 508 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01554 | MatE | MatE | 2.3E-33 | 172 | 332 |
PF01554 | MatE | MatE | 3.2E-09 | 394 | 465 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P38767|ERC1_YEAST | Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1 | 110 | 465 | 4.0E-97 |
sp|Q05497|YD338_YEAST | Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR338C PE=1 SV=1 | 41 | 465 | 4.0E-82 |
sp|Q9USK3|YJ2D_SCHPO | Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4B3.13 PE=3 SV=1 | 135 | 465 | 1.0E-77 |
sp|Q9UT92|YL47_SCHPO | Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC323.07c PE=1 SV=1 | 160 | 465 | 2.0E-66 |
sp|Q10085|YAO6_SCHPO | Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.06 PE=3 SV=1 | 162 | 465 | 1.0E-46 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P38767|ERC1_YEAST | Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1 | 110 | 465 | 4.0E-97 |
sp|Q05497|YD338_YEAST | Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR338C PE=1 SV=1 | 41 | 465 | 4.0E-82 |
sp|Q9USK3|YJ2D_SCHPO | Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4B3.13 PE=3 SV=1 | 135 | 465 | 1.0E-77 |
sp|Q9UT92|YL47_SCHPO | Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC323.07c PE=1 SV=1 | 160 | 465 | 2.0E-66 |
sp|Q10085|YAO6_SCHPO | Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.06 PE=3 SV=1 | 162 | 465 | 1.0E-46 |
sp|Q3V050|S47A2_MOUSE | Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1 | 153 | 466 | 1.0E-43 |
sp|A4IIS8|S47A1_XENTR | Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1 | 185 | 466 | 9.0E-42 |
sp|Q9C9U1|DTX17_ARATH | Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1 | 160 | 466 | 6.0E-41 |
sp|Q9FHB6|DTX16_ARATH | Protein DETOXIFICATION 16 OS=Arabidopsis thaliana GN=DTX16 PE=2 SV=1 | 156 | 466 | 5.0E-40 |
sp|F4IHU9|DTX15_ARATH | Protein DETOXIFICATION 15 OS=Arabidopsis thaliana GN=DTX15 PE=3 SV=1 | 160 | 466 | 5.0E-38 |
sp|A1L1P9|S47A1_DANRE | Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1 | 131 | 465 | 4.0E-37 |
sp|Q8K0H1|S47A1_MOUSE | Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2 | 161 | 465 | 5.0E-36 |
sp|Q5I0E9|S47A1_RAT | Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1 | 159 | 465 | 9.0E-36 |
sp|Q5RFD2|S47A1_PONAB | Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1 | 157 | 465 | 9.0E-36 |
sp|Q9LUH2|DTX19_ARATH | Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1 | 127 | 460 | 7.0E-35 |
sp|Q9SZE2|DTX51_ARATH | Protein DETOXIFICATION 51 OS=Arabidopsis thaliana GN=DTX51 PE=2 SV=1 | 162 | 465 | 4.0E-34 |
sp|Q9LUH3|DTX18_ARATH | Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1 | 161 | 460 | 2.0E-33 |
sp|Q96FL8|S47A1_HUMAN | Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1 | 157 | 465 | 5.0E-33 |
sp|Q9C9M8|DTX9_ARATH | Protein DETOXIFICATION 9 OS=Arabidopsis thaliana GN=DTX9 PE=2 SV=1 | 156 | 454 | 6.0E-33 |
sp|Q4PSF4|DTX52_ARATH | Protein DETOXIFICATION 52 OS=Arabidopsis thaliana GN=DTX52 PE=2 SV=1 | 157 | 465 | 7.0E-31 |
sp|Q9ZVH5|DTX53_ARATH | Protein DETOXIFICATION 53 OS=Arabidopsis thaliana GN=DTX53 PE=2 SV=1 | 161 | 465 | 4.0E-30 |
sp|A7KAU2|S47A1_RABIT | Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1 | 157 | 465 | 1.0E-29 |
sp|Q9C994|DTX14_ARATH | Protein DETOXIFICATION 14 OS=Arabidopsis thaliana GN=DTX14 PE=3 SV=1 | 156 | 454 | 4.0E-28 |
sp|Q9SIA5|DTX1_ARATH | Protein DETOXIFICATION 1 OS=Arabidopsis thaliana GN=DTX1 PE=2 SV=1 | 156 | 462 | 4.0E-27 |
sp|Q9SIA4|DTX3_ARATH | Protein DETOXIFICATION 3 OS=Arabidopsis thaliana GN=DTX3 PE=3 SV=1 | 156 | 462 | 6.0E-27 |
sp|Q8GXM8|DTX2_ARATH | Protein DETOXIFICATION 2 OS=Arabidopsis thaliana GN=DTX2 PE=2 SV=1 | 156 | 462 | 1.0E-26 |
sp|Q5R7E4|S47A2_PONAB | Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1 | 162 | 463 | 4.0E-26 |
sp|Q86VL8|S47A2_HUMAN | Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1 | 162 | 463 | 5.0E-26 |
sp|A7KAU3|S47A2_RABIT | Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1 | 126 | 463 | 7.0E-26 |
sp|Q8VYL8|DTX10_ARATH | Protein DETOXIFICATION 10 OS=Arabidopsis thaliana GN=DTX10 PE=2 SV=1 | 137 | 462 | 2.0E-25 |
sp|F4HQ05|DTX8_ARATH | Protein DETOXIFICATION 8 OS=Arabidopsis thaliana GN=DTX8 PE=3 SV=1 | 180 | 464 | 8.0E-25 |
sp|Q9SIA3|DTX4_ARATH | Protein DETOXIFICATION 4 OS=Arabidopsis thaliana GN=DTX4 PE=3 SV=2 | 156 | 462 | 3.0E-24 |
sp|F4HZH9|DTX11_ARATH | Protein DETOXIFICATION 11 OS=Arabidopsis thaliana GN=DTX11 PE=3 SV=1 | 128 | 462 | 4.0E-24 |
sp|O80695|DTX37_ARATH | Protein DETOXIFICATION 37 OS=Arabidopsis thaliana GN=DTX37 PE=2 SV=1 | 128 | 465 | 1.0E-22 |
sp|Q9LVD9|DTX40_ARATH | Protein DETOXIFICATION 40 OS=Arabidopsis thaliana GN=DTX40 PE=1 SV=1 | 154 | 467 | 2.0E-22 |
sp|Q9FJ87|DTX50_ARATH | Protein DETOXIFICATION 50 OS=Arabidopsis thaliana GN=DTX50 PE=2 SV=1 | 157 | 454 | 3.0E-22 |
sp|Q9SIA1|DTX5_ARATH | Protein DETOXIFICATION 5 OS=Arabidopsis thaliana GN=DTX5 PE=3 SV=2 | 162 | 454 | 3.0E-22 |
sp|Q8L731|DTX12_ARATH | Protein DETOXIFICATION 12 OS=Arabidopsis thaliana GN=DTX12 PE=2 SV=1 | 139 | 462 | 5.0E-22 |
sp|Q1PFG9|DTX7_ARATH | Protein DETOXIFICATION 7 OS=Arabidopsis thaliana GN=DTX7 PE=2 SV=1 | 164 | 460 | 7.0E-22 |
sp|Q9SLV0|DTX48_ARATH | Protein DETOXIFICATION 48 OS=Arabidopsis thaliana GN=DTX48 PE=2 SV=1 | 161 | 462 | 1.0E-21 |
sp|Q9SAB0|DTX36_ARATH | Protein DETOXIFICATION 36 OS=Arabidopsis thaliana GN=DTX36 PE=2 SV=1 | 162 | 454 | 1.0E-21 |
sp|Q94AL1|DTX13_ARATH | Protein DETOXIFICATION 13 OS=Arabidopsis thaliana GN=DTX13 PE=2 SV=1 | 162 | 462 | 2.0E-21 |
sp|O82752|DTX49_ARATH | Protein DETOXIFICATION 49 OS=Arabidopsis thaliana GN=DTX49 PE=2 SV=1 | 161 | 464 | 4.0E-21 |
sp|Q9FH21|DTX55_ARATH | Protein DETOXIFICATION 55 OS=Arabidopsis thaliana GN=DTX55 PE=2 SV=1 | 161 | 460 | 1.0E-20 |
sp|Q8RWF5|DTX6_ARATH | Protein DETOXIFICATION 6 OS=Arabidopsis thaliana GN=DTX6 PE=2 SV=1 | 156 | 454 | 2.0E-20 |
sp|F4JKB9|DTX38_ARATH | Protein DETOXIFICATION 38 OS=Arabidopsis thaliana GN=DTX38 PE=2 SV=1 | 186 | 454 | 2.0E-19 |
sp|Q8RXK1|DTX23_ARATH | Protein DETOXIFICATION 23 OS=Arabidopsis thaliana GN=DTX23 PE=2 SV=1 | 143 | 466 | 2.0E-19 |
sp|F4JTB3|DTX35_ARATH | Protein DETOXIFICATION 35 OS=Arabidopsis thaliana GN=DTX35 PE=2 SV=1 | 142 | 465 | 9.0E-19 |
sp|Q940N9|DTX39_ARATH | Protein DETOXIFICATION 39 OS=Arabidopsis thaliana GN=DTX39 PE=2 SV=1 | 162 | 454 | 1.0E-18 |
sp|F4JH46|DTX34_ARATH | Protein DETOXIFICATION 34 OS=Arabidopsis thaliana GN=DTX34 PE=2 SV=1 | 170 | 465 | 4.0E-18 |
sp|Q9LPV4|DTX31_ARATH | Protein DETOXIFICATION 31 OS=Arabidopsis thaliana GN=DTX31 PE=2 SV=1 | 153 | 495 | 8.0E-18 |
sp|Q38956|DTX29_ARATH | Protein DETOXIFICATION 29 OS=Arabidopsis thaliana GN=DTX29 PE=1 SV=1 | 132 | 495 | 1.0E-17 |
sp|Q9FNC1|DTX28_ARATH | Protein DETOXIFICATION 28 OS=Arabidopsis thaliana GN=DTX28 PE=3 SV=1 | 192 | 454 | 3.0E-17 |
sp|Q9LS19|DTX30_ARATH | Protein DETOXIFICATION 30 OS=Arabidopsis thaliana GN=DTX30 PE=2 SV=1 | 125 | 496 | 8.0E-17 |
sp|Q9LE20|DTX54_ARATH | Protein DETOXIFICATION 54 OS=Arabidopsis thaliana GN=DTX54 PE=2 SV=1 | 161 | 465 | 2.0E-16 |
sp|Q1PDX9|DTX26_ARATH | Protein DETOXIFICATION 26 OS=Arabidopsis thaliana GN=DTX26 PE=2 SV=1 | 151 | 465 | 7.0E-16 |
sp|Q8W488|DTX21_ARATH | Protein DETOXIFICATION 21 OS=Arabidopsis thaliana GN=DTX21 PE=1 SV=1 | 143 | 460 | 1.0E-15 |
sp|F4HPH1|DTX22_ARATH | Protein DETOXIFICATION 22 OS=Arabidopsis thaliana GN=DTX22 PE=2 SV=1 | 143 | 460 | 1.0E-15 |
sp|Q9SX83|DTX33_ARATH | Protein DETOXIFICATION 33 OS=Arabidopsis thaliana GN=DTX33 PE=2 SV=1 | 161 | 466 | 2.0E-15 |
sp|Q9FKQ1|DTX27_ARATH | Protein DETOXIFICATION 27 OS=Arabidopsis thaliana GN=DTX27 PE=2 SV=1 | 162 | 460 | 2.0E-15 |
sp|F4HPH2|DTX20_ARATH | Protein DETOXIFICATION 20 OS=Arabidopsis thaliana GN=DTX20 PE=3 SV=1 | 147 | 460 | 1.0E-13 |
sp|O82855|NORM_VIBPA | Multidrug resistance protein NorM OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=norM PE=1 SV=2 | 159 | 465 | 1.0E-13 |
sp|F4I4Q3|DTX32_ARATH | Protein DETOXIFICATION 32 OS=Arabidopsis thaliana GN=DTX32 PE=3 SV=1 | 162 | 453 | 2.0E-13 |
sp|Q9LYT3|DTX41_ARATH | Protein DETOXIFICATION 41 OS=Arabidopsis thaliana GN=DTX41 PE=2 SV=1 | 162 | 467 | 7.0E-13 |
sp|Q7MKP8|NORM_VIBVY | Multidrug resistance protein NorM OS=Vibrio vulnificus (strain YJ016) GN=norM PE=3 SV=2 | 159 | 465 | 1.0E-11 |
sp|Q8D9N8|NORM_VIBVU | Multidrug resistance protein NorM OS=Vibrio vulnificus (strain CMCP6) GN=norM PE=3 SV=2 | 159 | 465 | 4.0E-11 |
sp|Q9KRU4|NORM_VIBCH | Multidrug resistance protein NorM OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=norM PE=3 SV=2 | 159 | 465 | 4.0E-11 |
sp|Q5E4Y6|NORM_VIBF1 | Multidrug resistance protein NorM OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=norM PE=3 SV=1 | 159 | 461 | 1.0E-10 |
sp|O49660|DTX56_ARATH | Protein DETOXIFICATION 56 OS=Arabidopsis thaliana GN=DTX56 PE=1 SV=1 | 134 | 453 | 2.0E-09 |
sp|Q6LQ49|NORM_PHOPR | Multidrug resistance protein NorM OS=Photobacterium profundum GN=norM PE=3 SV=1 | 158 | 464 | 4.0E-09 |
sp|Q5NYX9|NORM_AROAE | Probable multidrug resistance protein NorM OS=Aromatoleum aromaticum (strain EbN1) GN=norM PE=3 SV=1 | 172 | 465 | 6.0E-09 |
sp|Q9KEJ2|NORM_BACHD | Probable multidrug resistance protein NorM OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=norM PE=3 SV=1 | 158 | 465 | 2.0E-08 |
sp|Q8L616|DTX25_ARATH | Protein DETOXIFICATION 25 OS=Arabidopsis thaliana GN=DTX25 PE=2 SV=1 | 219 | 466 | 3.0E-08 |
sp|A1JPA1|MDTK_YERE8 | Multidrug resistance protein MdtK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=mdtK PE=3 SV=1 | 162 | 463 | 5.0E-08 |
sp|A7FHJ7|MDTK_YERP3 | Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtK PE=3 SV=1 | 162 | 463 | 5.0E-08 |
sp|B1JJ53|MDTK_YERPY | Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|Q66A27|MDTK_YERPS | Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|A4TIP9|MDTK_YERPP | Multidrug resistance protein MdtK OS=Yersinia pestis (strain Pestoides F) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|Q1CIK5|MDTK_YERPN | Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|A9QZC0|MDTK_YERPG | Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|Q8ZDZ8|MDTK_YERPE | Multidrug resistance protein MdtK OS=Yersinia pestis GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|B2K5I9|MDTK_YERPB | Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|Q1C769|MDTK_YERPA | Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdtK PE=3 SV=1 | 162 | 463 | 6.0E-08 |
sp|F4J158|DTX24_ARATH | Protein DETOXIFICATION 24 OS=Arabidopsis thaliana GN=DTX24 PE=2 SV=1 | 182 | 466 | 7.0E-08 |
sp|Q8CUL5|NORM_OCEIH | Probable multidrug resistance protein NorM OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=norM PE=3 SV=2 | 180 | 460 | 8.0E-08 |
sp|Q5KZL2|NORM_GEOKA | Probable multidrug resistance protein NorM OS=Geobacillus kaustophilus (strain HTA426) GN=norM PE=3 SV=1 | 180 | 460 | 1.0E-07 |
sp|Q9I3Y3|PMPM_PSEAE | Multidrug resistance protein PmpM OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pmpM PE=3 SV=1 | 162 | 465 | 2.0E-07 |
sp|Q7WAK9|NORM_BORPA | Probable multidrug resistance protein NorM OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) GN=norM PE=3 SV=1 | 156 | 453 | 2.0E-07 |
sp|Q7WJR0|NORM_BORBR | Probable multidrug resistance protein NorM OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) GN=norM PE=3 SV=1 | 156 | 453 | 2.0E-07 |
sp|Q8UDF5|NORM_AGRFC | Probable multidrug resistance protein NorM OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=norM PE=3 SV=1 | 148 | 454 | 3.0E-07 |
sp|Q6HLG9|NORM_BACHK | Probable multidrug resistance protein NorM OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=norM PE=3 SV=1 | 219 | 460 | 3.0E-07 |
sp|Q81T85|NORM_BACAN | Probable multidrug resistance protein NorM OS=Bacillus anthracis GN=norM PE=3 SV=1 | 219 | 460 | 3.0E-07 |
sp|Q92AG2|NORM_LISIN | Probable multidrug resistance protein NorM OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=norM PE=3 SV=1 | 215 | 447 | 8.0E-07 |
sp|Q8Y654|NORM_LISMO | Probable multidrug resistance protein NorM OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=norM PE=3 SV=1 | 215 | 447 | 1.0E-06 |
sp|Q73BB8|NORM_BACC1 | Probable multidrug resistance protein NorM OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=norM PE=3 SV=1 | 157 | 460 | 1.0E-06 |
sp|Q71YH0|NORM_LISMF | Probable multidrug resistance protein NorM OS=Listeria monocytogenes serotype 4b (strain F2365) GN=norM PE=3 SV=1 | 215 | 447 | 2.0E-06 |
sp|P45272|HMRM_HAEIN | Multidrug resistance protein HmrM OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hmrM PE=3 SV=1 | 154 | 460 | 2.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0015297 | antiporter activity | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0042910 | xenobiotic transmembrane transporter activity | Yes |
GO:0016020 | membrane | Yes |
GO:0006810 | transport | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0051179 | localization | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0022804 | active transmembrane transporter activity | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0003674 | molecular_function | No |
GO:0015291 | secondary active transmembrane transporter activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 247 | 264 | 17 |
2 | 279 | 299 | 20 |
3 | 312 | 334 | 22 |
4 | 344 | 366 | 22 |
5 | 387 | 409 | 22 |
6 | 419 | 441 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6903 MHGKQGTADNASPPPAAQATTASAATDDEPMAVSPALQALLRQEPELKLWLEHTGYFDAAHRARVVQGIKRLKAA EEERDRILRELHDTTGGLFHRRPASASTTTTPSSAQAANGRAAAASAAAAAAESPPSCDDVPADELLEEQWEEAV ASGRLRTTWQREAETVVAYSAPLIATFFLQYSINVASIFAVGRIGKVELGAVSLANMSAAISCLAPFQGLATSLD TLCAQAYGSGHKQLVGLQCQRLACFLLCLSAPVAVLWLFSDRILVLVVPDAESARLAGLYLKIMIFSIPGIILFE TGKRFLQAQGLFHATTVILVIAAPFNIFITWLLVWRVGLGFVGAPIAVAVTENLLPVLLVLYVRFVGGAQCWGGL SRRAFTQWWVMIRLALPGMIMVEAEWLAFEIMTLLASRFGTEYLAAQSVLATLATISYQVPFPVSIAASTRVANL IGAGMVNAAKVTARVVRRRPRGPLSPSPSLSLHSPPPPLTLLDDRRSWPSASSGSST* |
Coding | >Hirsu2|6903 ATGCACGGCAAGCAAGGGACAGCCGACAACGCCTCCCCGCCGCCCGCCGCACAGGCCACGACCGCCTCGGCAGCG ACCGACGACGAGCCCATGGCCGTCTCGCCTGCCCTCCAGGCCCTGCTTAGGCAGGAGCCGGAGCTGAAGCTGTGG CTCGAGCATACGGGCTACTTCGACGCCGCCCACCGCGCGCGGGTGGTGCAGGGCATCAAGAGGCTCAAGGCGGCC GAGGAGGAGCGTGACAGAATCCTCCGCGAGCTCCACGACACCACCGGCGGCCTGTTCCACCGCCGGCCCGCGTCG GCGTCGACGACCACGACGCCCTCGTCCGCCCAGGCGGCCAACGGCCGCGCCGCCGCCGCCTCCGCCGCCGCCGCC GCCGCCGAGTCGCCGCCGTCGTGCGATGACGTGCCCGCCGACGAGCTGCTCGAGGAGCAGTGGGAGGAGGCCGTG GCCTCGGGCCGGCTGCGCACCACCTGGCAGCGCGAGGCCGAGACCGTCGTCGCCTACTCGGCCCCGCTCATCGCC ACCTTCTTCCTGCAGTACTCCATCAACGTGGCCAGCATCTTCGCCGTCGGCCGCATAGGCAAGGTCGAGCTGGGC GCCGTGTCTCTGGCCAACATGTCGGCGGCAATCTCGTGCCTGGCGCCCTTCCAGGGGCTGGCCACGAGCCTGGAC ACGCTGTGCGCCCAGGCCTACGGGTCCGGCCACAAGCAGCTGGTCGGGCTGCAGTGCCAGCGGCTGGCCTGCTTC CTGCTGTGCCTGTCGGCGCCGGTGGCCGTGCTCTGGCTGTTCTCGGACCGGATCCTGGTGCTCGTAGTGCCGGAC GCCGAGTCGGCGCGGCTGGCCGGCCTGTACCTCAAGATCATGATCTTCTCCATCCCGGGCATCATCCTCTTCGAG ACGGGCAAGCGCTTCCTGCAGGCGCAGGGCCTGTTCCACGCGACGACGGTCATCCTCGTCATCGCCGCGCCCTTC AACATCTTCATCACCTGGCTGCTGGTCTGGCGCGTCGGGCTGGGCTTCGTCGGCGCCCCGATCGCCGTGGCCGTG ACGGAGAACCTGCTGCCGGTCCTGCTCGTCCTCTACGTCCGCTTCGTCGGCGGCGCCCAGTGCTGGGGCGGCCTC AGCCGGCGCGCCTTCACCCAGTGGTGGGTCATGATCCGCCTGGCGCTGCCGGGCATGATCATGGTCGAGGCCGAG TGGCTGGCCTTTGAGATCATGACGCTGCTGGCCAGCCGCTTCGGCACCGAGTACCTGGCCGCCCAGAGCGTGCTG GCGACGCTGGCCACCATCTCGTACCAGGTCCCCTTCCCCGTCTCCATCGCCGCCTCGACCCGCGTCGCCAACCTG ATCGGCGCCGGCATGGTGAACGCGGCCAAGGTCACGGCCAGGGTGGTACGTCGTCGTCCCCGCGGCCCTCTCTCT CCTTCGCCTTCTCTCTCTCTCCACTCCCCCCCCCCTCCGCTGACGCTGCTCGACGACAGACGTTCGTGGCCGTCT GCGTCCTCGGGCTCGTCAACCTGA |
Transcript | >Hirsu2|6903 ATGCACGGCAAGCAAGGGACAGCCGACAACGCCTCCCCGCCGCCCGCCGCACAGGCCACGACCGCCTCGGCAGCG ACCGACGACGAGCCCATGGCCGTCTCGCCTGCCCTCCAGGCCCTGCTTAGGCAGGAGCCGGAGCTGAAGCTGTGG CTCGAGCATACGGGCTACTTCGACGCCGCCCACCGCGCGCGGGTGGTGCAGGGCATCAAGAGGCTCAAGGCGGCC GAGGAGGAGCGTGACAGAATCCTCCGCGAGCTCCACGACACCACCGGCGGCCTGTTCCACCGCCGGCCCGCGTCG GCGTCGACGACCACGACGCCCTCGTCCGCCCAGGCGGCCAACGGCCGCGCCGCCGCCGCCTCCGCCGCCGCCGCC GCCGCCGAGTCGCCGCCGTCGTGCGATGACGTGCCCGCCGACGAGCTGCTCGAGGAGCAGTGGGAGGAGGCCGTG GCCTCGGGCCGGCTGCGCACCACCTGGCAGCGCGAGGCCGAGACCGTCGTCGCCTACTCGGCCCCGCTCATCGCC ACCTTCTTCCTGCAGTACTCCATCAACGTGGCCAGCATCTTCGCCGTCGGCCGCATAGGCAAGGTCGAGCTGGGC GCCGTGTCTCTGGCCAACATGTCGGCGGCAATCTCGTGCCTGGCGCCCTTCCAGGGGCTGGCCACGAGCCTGGAC ACGCTGTGCGCCCAGGCCTACGGGTCCGGCCACAAGCAGCTGGTCGGGCTGCAGTGCCAGCGGCTGGCCTGCTTC CTGCTGTGCCTGTCGGCGCCGGTGGCCGTGCTCTGGCTGTTCTCGGACCGGATCCTGGTGCTCGTAGTGCCGGAC GCCGAGTCGGCGCGGCTGGCCGGCCTGTACCTCAAGATCATGATCTTCTCCATCCCGGGCATCATCCTCTTCGAG ACGGGCAAGCGCTTCCTGCAGGCGCAGGGCCTGTTCCACGCGACGACGGTCATCCTCGTCATCGCCGCGCCCTTC AACATCTTCATCACCTGGCTGCTGGTCTGGCGCGTCGGGCTGGGCTTCGTCGGCGCCCCGATCGCCGTGGCCGTG ACGGAGAACCTGCTGCCGGTCCTGCTCGTCCTCTACGTCCGCTTCGTCGGCGGCGCCCAGTGCTGGGGCGGCCTC AGCCGGCGCGCCTTCACCCAGTGGTGGGTCATGATCCGCCTGGCGCTGCCGGGCATGATCATGGTCGAGGCCGAG TGGCTGGCCTTTGAGATCATGACGCTGCTGGCCAGCCGCTTCGGCACCGAGTACCTGGCCGCCCAGAGCGTGCTG GCGACGCTGGCCACCATCTCGTACCAGGTCCCCTTCCCCGTCTCCATCGCCGCCTCGACCCGCGTCGCCAACCTG ATCGGCGCCGGCATGGTGAACGCGGCCAAGGTCACGGCCAGGGTGGTACGTCGTCGTCCCCGCGGCCCTCTCTCT CCTTCGCCTTCTCTCTCTCTCCACTCCCCCCCCCCTCCGCTGACGCTGCTCGACGACAGACGTTCGTGGCCGTCT GCGTCCTCGGGCTCGTCAACCTGA |
Gene | >Hirsu2|6903 ATGCACGGCAAGCAAGGGACAGCCGACAACGCCTCCCCGCCGCCCGCCGCACAGGCCACGACCGCCTCGGCAGCG ACCGACGACGAGCCCATGGCCGTCTCGCCTGCCCTCCAGGCCCTGCTTAGGCAGGAGCCGGAGCTGAAGCTGTGG CTCGAGCATACGGGCTACTTCGACGCCGCCCACCGCGCGCGGGTGGTGCAGGGCATCAAGAGGCTCAAGGCGGCC GAGGAGGAGCGTGACAGAATCCTCCGCGAGCTCCACGACACCACCGGCGGCCTGTTCCACCGCCGGCCCGCGTCG GCGTCGACGACCACGACGCCCTCGTCCGCCCAGGCGGCCAACGGCCGCGCCGCCGCCGCCTCCGCCGCCGCCGCC GCCGCCGAGTCGCCGCCGTCGTGCGATGACGTGCCCGCCGACGAGCTGCTCGAGGAGCAGTGGGAGGAGGCCGTG GCCTCGGGCCGGCTGCGCACCACCTGGCAGCGCGAGGCCGAGACCGTCGTCGCCTACTCGGCCCCGCTCATCGCC ACCTTCTTCCTGCAGTACTCCATCAACGTGGCCAGCATCTTCGCCGTCGGCCGCATAGGCAAGGTCGAGCTGGGC GCCGTGTCTCGTAAGGGAGCCTTTCAACCCCCCACCCCGTTGAGCGAGAGAGGCATAAGAGTGATCTGACTTGGC CGAACAACAACAACAACAACAACAACAACAACAACAAAAGTGGCCAACATGTCGGCGGCAATCTCGTGCCTGGCG CCCTTCCAGGGGCTGGCCACGAGCCTGGACACGCTGTGCGCCCAGGCCTACGGGTCCGGCCACAAGCAGCTGGTC GGGCTGCAGTGCCAGCGGCTGGCCTGCTTCCTGCTGTGCCTGTCGGCGCCGGTGGCCGTGCTCTGGCTGTTCTCG GACCGGATCCTGGTGCTCGTAGTGCCGGACGCCGAGTCGGCGCGGCTGGCCGGCCTGTACCTCAAGATCATGATC TTCTCCATCCCGGGCATCATCCTCTTCGAGACGGGCAAGCGCTTCCTGCAGGCGCAGGGCCTGTTCCACGCGACG ACGGTCATCCTCGTCATCGCCGCGCCCTTCAACATCTTCATCACCTGGCTGCTGGTCTGGCGCGTCGGGCTGGGC TTCGTCGGCGCCCCGATCGCCGTGGCCGTGACGGAGAACCTGCTGCCGGTCCTGCTCGTCCTCTACGTCCGCTTC GTCGGCGGCGCCCAGTGCTGGGGCGGCCTCAGCCGGCGCGCCTTCACCCAGTGGTGGGTCATGATCCGCCTGGCG CTGCCGGGCATGATCATGGTCGAGGCCGAGTGGCTGGCCTTTGAGATCATGACGCTGCTGGCCAGCCGCTTCGGC ACCGAGTACCTGGCCGCCCAGAGCGTGCTGGCGACGCTGGCCACCATCTCGTACCAGGTCCCCTTCCCCGTCTCC ATCGCCGCCTCGACCCGCGTCGCCAACCTGATCGGCGCCGGCATGGTGAACGCGGCCAAGGTCACGGCCAGGGTG GTACGTCGTCGTCCCCGCGGCCCTCTCTCTCCTTCGCCTTCTCTCTCTCTCCACTCCCCCCCCCCTCCGCTGACG CTGCTCGACGACAGACGTTCGTGGCCGTCTGCGTCCTCGGGCTCGTCAACCTGA |