© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6878 |
| Gene name | |
| Location | Contig_371:15497..16518 |
| Strand | - |
| Gene length (bp) | 1021 |
| Transcript length (bp) | 954 |
| Coding sequence length (bp) | 954 |
| Protein length (aa) | 318 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00651 | BTB | BTB/POZ domain | 6.4E-14 | 25 | 98 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9VFP2|RDX_DROME | Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2 | 16 | 125 | 6.0E-09 |
| sp|Q99N64|GMCLL_MOUSE | Putative germ cell-less protein-like 1-like OS=Mus musculus GN=GMCL1P1 PE=2 SV=2 | 20 | 128 | 6.0E-08 |
| sp|Q08DS0|KLH21_BOVIN | Kelch-like protein 21 OS=Bos taurus GN=KLHL21 PE=2 SV=1 | 11 | 95 | 2.0E-06 |
| sp|Q3U410|KLH21_MOUSE | Kelch-like protein 21 OS=Mus musculus GN=Klhl21 PE=2 SV=1 | 11 | 95 | 2.0E-06 |
| sp|D4A2K4|KLH21_RAT | Kelch-like protein 21 OS=Rattus norvegicus GN=Klhl21 PE=3 SV=1 | 11 | 95 | 2.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9VFP2|RDX_DROME | Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2 | 16 | 125 | 6.0E-09 |
| sp|Q99N64|GMCLL_MOUSE | Putative germ cell-less protein-like 1-like OS=Mus musculus GN=GMCL1P1 PE=2 SV=2 | 20 | 128 | 6.0E-08 |
| sp|Q08DS0|KLH21_BOVIN | Kelch-like protein 21 OS=Bos taurus GN=KLHL21 PE=2 SV=1 | 11 | 95 | 2.0E-06 |
| sp|Q3U410|KLH21_MOUSE | Kelch-like protein 21 OS=Mus musculus GN=Klhl21 PE=2 SV=1 | 11 | 95 | 2.0E-06 |
| sp|D4A2K4|KLH21_RAT | Kelch-like protein 21 OS=Rattus norvegicus GN=Klhl21 PE=3 SV=1 | 11 | 95 | 2.0E-06 |
| sp|Q9UJP4|KLH21_HUMAN | Kelch-like protein 21 OS=Homo sapiens GN=KLHL21 PE=1 SV=4 | 11 | 95 | 2.0E-06 |
| sp|Q5BL35|SPOLA_DANRE | Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1 | 19 | 94 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6878 MASAPRPDLASDGQQQAALYQNIRQLFLADKYSDLTIHCGGRDFKAHRAILCPQSSFFAKACDSGFKESVTGVVN LPEDDPDVLKCFLQFIYSGNYEDGEYPTLDQPAFSATMELEEIDQELQQAPGIETGGPARDFPLHQIPTQSVSEE DGNSPFPSPIEPDLEYSSDGAEVDEEDILDAEIADLRAEKAENENHEHHTPNNLLLSLRVYIMADKFDVPALKLL ARHRFYMTAREIYDDDDDFPAVVEELYETTAPTDQIMREIPCRLIANCIGRGGSIPLPFEAIMRKHADLAVGVLH YSCIYWSGSQCPSCINW* |
| Coding | >Hirsu2|6878 ATGGCTTCCGCGCCCAGACCAGATCTCGCCAGTGATGGCCAGCAACAGGCGGCGCTCTACCAGAACATTCGTCAA CTGTTCCTCGCCGACAAGTACTCCGACTTGACGATACACTGTGGCGGCCGCGACTTCAAGGCTCATCGCGCCATT CTATGCCCGCAGTCATCCTTCTTCGCGAAGGCTTGCGACAGCGGCTTCAAGGAATCGGTGACTGGCGTTGTTAAC CTCCCAGAAGACGACCCCGATGTGCTGAAATGTTTCCTGCAATTCATCTACTCGGGAAACTATGAAGATGGCGAG TATCCGACCTTGGACCAGCCTGCCTTTTCTGCTACGATGGAACTCGAAGAAATCGACCAAGAACTCCAGCAAGCG CCAGGAATTGAAACCGGTGGCCCCGCGCGGGATTTTCCTCTCCATCAAATTCCAACTCAAAGCGTCAGCGAAGAA GACGGCAATAGTCCGTTTCCAAGCCCCATCGAGCCCGACCTGGAGTACTCCTCTGACGGCGCCGAAGTCGACGAA GAGGATATTCTGGACGCGGAGATCGCTGATCTGCGCGCGGAGAAGGCTGAGAATGAGAATCATGAGCACCACACC CCAAACAATCTCCTCCTTTCGCTCCGCGTATACATCATGGCGGACAAATTCGACGTACCGGCGCTCAAGTTACTA GCACGACACCGCTTCTACATGACGGCACGCGAGATCTATGACGATGACGATGACTTCCCCGCCGTCGTTGAGGAG CTGTACGAGACGACAGCGCCCACGGACCAGATCATGCGCGAGATTCCCTGTCGGCTTATCGCGAACTGCATCGGC CGCGGGGGATCTATTCCGTTGCCCTTTGAGGCCATCATGCGCAAGCATGCAGATCTGGCCGTCGGCGTCCTTCAT TACAGCTGTATCTACTGGTCTGGTTCTCAATGCCCGTCCTGTATAAACTGGTGA |
| Transcript | >Hirsu2|6878 ATGGCTTCCGCGCCCAGACCAGATCTCGCCAGTGATGGCCAGCAACAGGCGGCGCTCTACCAGAACATTCGTCAA CTGTTCCTCGCCGACAAGTACTCCGACTTGACGATACACTGTGGCGGCCGCGACTTCAAGGCTCATCGCGCCATT CTATGCCCGCAGTCATCCTTCTTCGCGAAGGCTTGCGACAGCGGCTTCAAGGAATCGGTGACTGGCGTTGTTAAC CTCCCAGAAGACGACCCCGATGTGCTGAAATGTTTCCTGCAATTCATCTACTCGGGAAACTATGAAGATGGCGAG TATCCGACCTTGGACCAGCCTGCCTTTTCTGCTACGATGGAACTCGAAGAAATCGACCAAGAACTCCAGCAAGCG CCAGGAATTGAAACCGGTGGCCCCGCGCGGGATTTTCCTCTCCATCAAATTCCAACTCAAAGCGTCAGCGAAGAA GACGGCAATAGTCCGTTTCCAAGCCCCATCGAGCCCGACCTGGAGTACTCCTCTGACGGCGCCGAAGTCGACGAA GAGGATATTCTGGACGCGGAGATCGCTGATCTGCGCGCGGAGAAGGCTGAGAATGAGAATCATGAGCACCACACC CCAAACAATCTCCTCCTTTCGCTCCGCGTATACATCATGGCGGACAAATTCGACGTACCGGCGCTCAAGTTACTA GCACGACACCGCTTCTACATGACGGCACGCGAGATCTATGACGATGACGATGACTTCCCCGCCGTCGTTGAGGAG CTGTACGAGACGACAGCGCCCACGGACCAGATCATGCGCGAGATTCCCTGTCGGCTTATCGCGAACTGCATCGGC CGCGGGGGATCTATTCCGTTGCCCTTTGAGGCCATCATGCGCAAGCATGCAGATCTGGCCGTCGGCGTCCTTCAT TACAGCTGTATCTACTGGTCTGGTTCTCAATGCCCGTCCTGTATAAACTGGTGA |
| Gene | >Hirsu2|6878 ATGGCTTCCGCGCCCAGACCAGATCTCGCCAGTGATGGCCAGCAACAGGCGGCGCTCTACCAGAACATTCGTCAA CTGTTCCTCGCCGACAAGTACTCCGACTTGACGATACACTGTGGCGGCCGCGACTTCAAGGCTCATCGCGCCATT CTATGCCCGCAGTCATCCTTCTTCGCGAAGGCTTGCGACAGCGGCTTCAAGGTGTCTGGTGGCTTCAGCCACATG ACATCCACAGAGCCATCAACTGACTTTATGTTCAATCCTCCAGGAATCGGTGACTGGCGTTGTTAACCTCCCAGA AGACGACCCCGATGTGCTGAAATGTTTCCTGCAATTCATCTACTCGGGAAACTATGAAGATGGCGAGTATCCGAC CTTGGACCAGCCTGCCTTTTCTGCTACGATGGAACTCGAAGAAATCGACCAAGAACTCCAGCAAGCGCCAGGAAT TGAAACCGGTGGCCCCGCGCGGGATTTTCCTCTCCATCAAATTCCAACTCAAAGCGTCAGCGAAGAAGACGGCAA TAGTCCGTTTCCAAGCCCCATCGAGCCCGACCTGGAGTACTCCTCTGACGGCGCCGAAGTCGACGAAGAGGATAT TCTGGACGCGGAGATCGCTGATCTGCGCGCGGAGAAGGCTGAGAATGAGAATCATGAGCACCACACCCCAAACAA TCTCCTCCTTTCGCTCCGCGTATACATCATGGCGGACAAATTCGACGTACCGGCGCTCAAGTTACTAGCACGACA CCGCTTCTACATGACGGCACGCGAGATCTATGACGATGACGATGACTTCCCCGCCGTCGTTGAGGAGCTGTACGA GACGACAGCGCCCACGGACCAGATCATGCGCGAGATTCCCTGTCGGCTTATCGCGAACTGCATCGGCCGCGGGGG ATCTATTCCGTTGCCCTTTGAGGCCATCATGCGCAAGCATGCAGATCTGGCCGTCGGCGTCCTTCATTACAGCTG TATCTACTGGTCTGGTTCTCAATGCCCGTCCTGTATAAACTGGTGA |