© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6877 |
| Gene name | |
| Location | Contig_371:13069..14219 |
| Strand | + |
| Gene length (bp) | 1150 |
| Transcript length (bp) | 1098 |
| Coding sequence length (bp) | 1098 |
| Protein length (aa) | 366 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03619 | Solute_trans_a | Organic solute transporter Ostalpha | 8.5E-56 | 1 | 239 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5ZMP3|T184C_CHICK | Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 | 1 | 243 | 4.0E-18 |
| sp|Q4QQS1|T184A_RAT | Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 | 16 | 290 | 8.0E-18 |
| sp|Q5RET6|T184C_PONAB | Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 | 1 | 243 | 2.0E-17 |
| sp|Q9NVA4|T184C_HUMAN | Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 | 1 | 243 | 2.0E-17 |
| sp|Q3UFJ6|T184A_MOUSE | Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 | 16 | 290 | 2.0E-17 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5ZMP3|T184C_CHICK | Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 | 1 | 243 | 4.0E-18 |
| sp|Q4QQS1|T184A_RAT | Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 | 16 | 290 | 8.0E-18 |
| sp|Q5RET6|T184C_PONAB | Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 | 1 | 243 | 2.0E-17 |
| sp|Q9NVA4|T184C_HUMAN | Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 | 1 | 243 | 2.0E-17 |
| sp|Q3UFJ6|T184A_MOUSE | Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 | 16 | 290 | 2.0E-17 |
| sp|Q8BG09|T184B_MOUSE | Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 | 6 | 290 | 1.0E-16 |
| sp|Q17QL9|T184C_BOVIN | Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1 | 1 | 243 | 1.0E-16 |
| sp|Q810F5|T184C_RAT | Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1 | 1 | 243 | 3.0E-16 |
| sp|Q9Y519|T184B_HUMAN | Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 | 5 | 290 | 1.0E-15 |
| sp|Q6GQE1|T184C_XENLA | Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 | 1 | 243 | 1.0E-15 |
| sp|Q28CV2|T184C_XENTR | Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 | 1 | 243 | 1.0E-15 |
| sp|Q6ZMB5|T184A_HUMAN | Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 | 14 | 290 | 2.0E-15 |
| sp|A2VDL9|T184B_BOVIN | Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 | 5 | 290 | 2.0E-15 |
| sp|Q75JN3|T1842_DICDI | Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium discoideum GN=tmem184B PE=3 SV=1 | 3 | 228 | 3.0E-15 |
| sp|Q3TPR7|T184C_MOUSE | Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1 | 1 | 243 | 1.0E-14 |
| sp|Q1RMW2|T184A_BOVIN | Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 | 20 | 290 | 4.0E-14 |
| sp|Q94CA0|LAZH1_ARATH | Protein LAZ1 homolog 1 OS=Arabidopsis thaliana GN=At1g77220 PE=2 SV=1 | 1 | 269 | 1.0E-13 |
| sp|Q54PI4|T1841_DICDI | Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 | 1 | 247 | 3.0E-12 |
| sp|F4JTN2|LAZ1_ARATH | Protein LAZ1 OS=Arabidopsis thaliana GN=LAZ1 PE=1 SV=1 | 1 | 271 | 5.0E-12 |
| sp|Q54WM0|T1843_DICDI | Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 | 1 | 228 | 9.0E-12 |
| sp|Q09906|TM184_SCHPO | Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1 SV=1 | 1 | 239 | 4.0E-10 |
| sp|Q5BPZ5|LAZH2_ARATH | Protein LAZ1 homolog 2 OS=Arabidopsis thaliana GN=At1g23070 PE=2 SV=1 | 1 | 271 | 1.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 94 | 116 | 22 |
| 2 | 136 | 158 | 22 |
| 3 | 173 | 195 | 22 |
| 4 | 207 | 229 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6877 MFPVFAIAYFFQIQFYPEAIYFRLLSDCYEAFALASFFALICHYVAPDLHVQKAFFFEMRPKPWIWPLSWLSKCC YRSWKTPSSGLTWFNIIWIGVYQYCFVRVGLTISGIIANGVGKYCEDSNSPAFAKIWPRALQITVLGFISLLVAM FCLLQFYVQLRKPLAEHKLSLKFLAIKGIIFLSFLQNAVLSFVSAKHSDNRSRVLAYADVKVGLPALLLCIELAL FAVLNLRAYPSKPYLDEAPISHYPDPDPERLNSQPPRLNMRSPRSGGPLGILAIVDALNPWDFVKAFARGIRWLF CGVKRRNEDTDYSLTGLQAYFIPKRGTAHPNITSPEAVSRAHGRMRAFRVEEAAAPARNTTADGR* |
| Coding | >Hirsu2|6877 ATGTTTCCCGTCTTCGCCATCGCGTACTTCTTTCAGATACAATTCTACCCTGAGGCCATCTATTTTCGATTGCTC TCCGACTGCTACGAAGCTTTTGCTCTCGCCTCCTTCTTCGCCCTTATTTGCCACTACGTGGCTCCCGATCTCCAT GTGCAAAAGGCATTCTTCTTCGAGATGCGCCCCAAGCCCTGGATATGGCCTCTTAGCTGGCTTTCCAAGTGCTGC TATCGCTCCTGGAAGACGCCTAGCAGTGGTCTTACCTGGTTCAACATAATTTGGATCGGCGTTTACCAATATTGC TTCGTACGCGTCGGCCTGACCATCTCGGGGATTATTGCAAACGGTGTGGGCAAGTACTGCGAAGACTCGAACAGT CCCGCCTTTGCCAAAATCTGGCCACGTGCACTTCAGATCACTGTTCTCGGATTCATATCCCTACTTGTCGCCATG TTCTGTCTCCTTCAATTCTACGTTCAGCTGCGCAAGCCTCTGGCCGAGCATAAATTATCACTTAAATTCCTAGCC ATCAAGGGCATCATCTTTTTATCCTTTCTACAGAATGCAGTCCTCTCCTTTGTTTCAGCGAAGCATTCAGACAAC CGATCCCGAGTCCTTGCCTACGCAGACGTCAAGGTCGGCCTCCCAGCCCTCCTGCTCTGCATTGAACTGGCTCTG TTCGCCGTTCTAAATTTGCGAGCCTATCCCAGCAAGCCGTATCTCGACGAGGCGCCCATCAGCCACTATCCGGAT CCTGACCCAGAGCGGCTGAACTCTCAGCCCCCCCGACTCAATATGAGGTCGCCGCGGAGTGGCGGGCCCTTGGGG ATCTTGGCCATTGTGGACGCGCTCAATCCATGGGACTTTGTAAAAGCTTTCGCCAGAGGCATCCGCTGGCTTTTT TGCGGTGTCAAGCGCCGTAACGAGGATACTGATTATTCTCTCACTGGCCTGCAAGCATACTTCATTCCAAAAAGA GGCACCGCCCACCCCAACATCACCTCCCCCGAAGCCGTATCCAGGGCCCACGGTCGAATGCGTGCGTTTCGTGTA GAAGAAGCTGCGGCCCCAGCACGAAACACAACTGCCGACGGCCGATAG |
| Transcript | >Hirsu2|6877 ATGTTTCCCGTCTTCGCCATCGCGTACTTCTTTCAGATACAATTCTACCCTGAGGCCATCTATTTTCGATTGCTC TCCGACTGCTACGAAGCTTTTGCTCTCGCCTCCTTCTTCGCCCTTATTTGCCACTACGTGGCTCCCGATCTCCAT GTGCAAAAGGCATTCTTCTTCGAGATGCGCCCCAAGCCCTGGATATGGCCTCTTAGCTGGCTTTCCAAGTGCTGC TATCGCTCCTGGAAGACGCCTAGCAGTGGTCTTACCTGGTTCAACATAATTTGGATCGGCGTTTACCAATATTGC TTCGTACGCGTCGGCCTGACCATCTCGGGGATTATTGCAAACGGTGTGGGCAAGTACTGCGAAGACTCGAACAGT CCCGCCTTTGCCAAAATCTGGCCACGTGCACTTCAGATCACTGTTCTCGGATTCATATCCCTACTTGTCGCCATG TTCTGTCTCCTTCAATTCTACGTTCAGCTGCGCAAGCCTCTGGCCGAGCATAAATTATCACTTAAATTCCTAGCC ATCAAGGGCATCATCTTTTTATCCTTTCTACAGAATGCAGTCCTCTCCTTTGTTTCAGCGAAGCATTCAGACAAC CGATCCCGAGTCCTTGCCTACGCAGACGTCAAGGTCGGCCTCCCAGCCCTCCTGCTCTGCATTGAACTGGCTCTG TTCGCCGTTCTAAATTTGCGAGCCTATCCCAGCAAGCCGTATCTCGACGAGGCGCCCATCAGCCACTATCCGGAT CCTGACCCAGAGCGGCTGAACTCTCAGCCCCCCCGACTCAATATGAGGTCGCCGCGGAGTGGCGGGCCCTTGGGG ATCTTGGCCATTGTGGACGCGCTCAATCCATGGGACTTTGTAAAAGCTTTCGCCAGAGGCATCCGCTGGCTTTTT TGCGGTGTCAAGCGCCGTAACGAGGATACTGATTATTCTCTCACTGGCCTGCAAGCATACTTCATTCCAAAAAGA GGCACCGCCCACCCCAACATCACCTCCCCCGAAGCCGTATCCAGGGCCCACGGTCGAATGCGTGCGTTTCGTGTA GAAGAAGCTGCGGCCCCAGCACGAAACACAACTGCCGACGGCCGATAG |
| Gene | >Hirsu2|6877 ATGTTTCCCGTCTTCGCCATCGCGTACTTCTTTCAGATACAATTCTACCCTGAGGCCATCTATTTTCGATTGCTC TCCGACTGCTACGAAGCTTTTGCTCTCGCCTCCTTCTTCGCCCTTATTTGCCACTACGTGGCTCCCGATCTCCAT GTGCAAAAGGCATTCTTCTTCGAGATGCGCCCCAAGCCCTGGATATGGCCTCTTAGCTGGCTTTCCAAGTGCTGC TATCGCTCCTGGAAGACGCCTAGCAGTGGTCTTACCTGGTTCAACATAATTTGGATCGGCGTTTACCAATATTGC TTCGTACGCGTCGGCCTGACCATCTCGGGGATTATTGCAAACGGTGTGGGCAAGTACTGCGAAGACTCGAACAGT CCCGCCTTTGCCAAAATCTGGGTAAGAATATGCGTTTTCCTTGAATAAGTCTGATGAAAATTGATCTGACCAGCC ACGTGCACTTCAGATCACTGTTCTCGGATTCATATCCCTACTTGTCGCCATGTTCTGTCTCCTTCAATTCTACGT TCAGCTGCGCAAGCCTCTGGCCGAGCATAAATTATCACTTAAATTCCTAGCCATCAAGGGCATCATCTTTTTATC CTTTCTACAGAATGCAGTCCTCTCCTTTGTTTCAGCGAAGCATTCAGACAACCGATCCCGAGTCCTTGCCTACGC AGACGTCAAGGTCGGCCTCCCAGCCCTCCTGCTCTGCATTGAACTGGCTCTGTTCGCCGTTCTAAATTTGCGAGC CTATCCCAGCAAGCCGTATCTCGACGAGGCGCCCATCAGCCACTATCCGGATCCTGACCCAGAGCGGCTGAACTC TCAGCCCCCCCGACTCAATATGAGGTCGCCGCGGAGTGGCGGGCCCTTGGGGATCTTGGCCATTGTGGACGCGCT CAATCCATGGGACTTTGTAAAAGCTTTCGCCAGAGGCATCCGCTGGCTTTTTTGCGGTGTCAAGCGCCGTAACGA GGATACTGATTATTCTCTCACTGGCCTGCAAGCATACTTCATTCCAAAAAGAGGCACCGCCCACCCCAACATCAC CTCCCCCGAAGCCGTATCCAGGGCCCACGGTCGAATGCGTGCGTTTCGTGTAGAAGAAGCTGCGGCCCCAGCACG AAACACAACTGCCGACGGCCGATAG |